Sphaerodactylus townsendi (Townsend's least gecko): 125430710
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Entry
125430710 CDS
T08213
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125430710 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125430710 (CDC40)
Spliceosome [BR:
stow03041
]
Complex C
Other components
Step II factors
125430710 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
125430710
NCBI-ProteinID:
XP_048348813
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All DBs
Position
LG01:complement(121782429..121841043)
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AA seq
621 aa
AA seq
DB search
MVNASTQNRKRRENNPTHLPGRGGRSSPPALGHSPLAKMSAAIAALASYGGSDSDSDSGA
EAEGGTGPLAQVAAGDSVLHLASLPAAQQQAILPAVDSAPAVAVKEDVETGVHLDPATKD
VQYNPTYDTMFAPEFGPVNPFKTQQMAAPRNMLSGYTEPAHINDFMFEQQRRTFATYGYA
LDPSVDNYDVSTKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWAK
YIDEKDVAKPSEEEQRELDEITAKRQKKGKHEDDKPGEEKTILHVKEMYDYQGRSYLHVP
QDVGVNLRSPVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV
YGERRCLRTFIGHSKAVRDICFNNAGSQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYC
VKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSD
DKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNK
KKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVW
HPHETSKVITCGWDGLIKLWD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgcatcaacacagaatcgaaagagaagagaaaataatcccactcatcttcca
ggacgcggcggacgctcctccccgccggcgctcggccattcccctcttgctaagatgtct
gccgccatcgctgcgctcgcctcgtacggaggctccgattcggattcagactccggcgcc
gaggctgagggcgggaccggccccctggctcaggtggcggctggggactcggtgctgcac
ctggcctcgcttcctgctgcccaacagcaggcgatcctgcccgccgtggactcggcccct
gcggtggcggtgaaggaagatgtggaaacaggagttcatcttgatccagctaccaaggac
gttcagtataacccaacatatgacaccatgtttgcacctgagtttggaccagtgaatcct
tttaagactcagcagatggctgcacccaggaatatgctttctggatatacggaaccagca
cacattaatgacttcatgtttgaacaacaaagaagaacatttgcaacctacggatatgct
ctggatccttcagtagataattatgatgtttctactaaatatattggatctgttgaggaa
gcagaaaagaatcaaggtctgacagtatttgaaactgggcagaagaaaacagaaaaaagg
aagaaattcaaagagaatgatgcctctaatattgatggtttcttgggaccatgggcaaag
tacattgatgaaaaggatgttgccaaaccttcagaagaagaacagagggaactggatgaa
ataacagcaaagaggcaaaagaaaggcaagcatgaagatgacaaacctggagaggaaaag
actattttgcatgtcaaagagatgtatgactaccaggggaggtcctaccttcatgtccct
caggatgttggagttaacctgcgttcacctgtgccccctgagaaatgttaccttcctaaa
aaacagattcatgtgtggtctgggcacacaaagggtgtcagtgctgtcagactgtttcct
ctttctggccacctgttgctgtcttgttcgatggactgcaaaattaagctctgggaagtt
tatggtgaacgaagatgcttacgaacattcattgggcatagtaaagctgttcgagatata
tgcttcaacaatgctgggagccagtttctcagtgccgcctatgaccgatatcttaaactc
tgggatactgaaacaggacagtgcatttcaagattcaccaacagaaaggttccttactgt
gtcaagttcaatcctgatgaagacaagcaaaacctatttgtggcagggatgtcagataag
aaaattgttcaatgggacattcgaagtggagaaatcgtacaggagtatgacaggcatttg
ggtgctgtcaacaccattgtgtttgtggatgaaaacagacgatttgtcagcacgtctgat
gacaagagtttgagggtctgggaatgggacattccagtagatttcaagtacatcgcagaa
ccaagtatgcactcaatgccagcagtgactttgtctccaaatggaaaatggttggcgtgt
caatcgatggacaatcagattttgatttttggtgctcagaacagattcagactaaataaa
aagaaaattttcaaagggcatatggtggcaggctatgcttgtcaagttgatttttcacct
gacatgagctatgtgatatcaggagatgcagatgggaagctcaatatctgggactggaag
acaacaaaactttacagtagactaaaagcccacgacaaagtctgcattggcgcagtgtgg
catccacacgaaacatccaaggtgatcacatgcggatgggatggcctcattaaactctgg
gactga
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