Sphaerodactylus townsendi (Townsend's least gecko): 125430731
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Entry
125430731 CDS
T08213
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125430731 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125430731 (PDS5B)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125430731 (PDS5B)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
125430731 (PDS5B)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
125430731 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
125430731
NCBI-ProteinID:
XP_048348854
LinkDB
All DBs
Position
LG04:33206072..33292628
Genome browser
AA seq
1447 aa
AA seq
DB search
MAHSKTRANDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPEKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MGSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQSIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQSEAGKEAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNERMKYLYYL
YATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASGKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDDKVRHQLEMLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMEDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKAKK
GPPRQAKYAIHCIHAIFSSKETQFAQVFEPLHKSLDPSNLEHLITPLVSIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMSDRMPGKKTTKLWVPDEEVSPETLVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAASAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQAFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKIQDIDQLKDIKEC
LWFILEILIAKNENNSHAFIRKMVENIKQTKDAQGPDDPKMNEKLYTVCDIAMNIIMSKS
TTYSLESPKDPVLPARYFTQPDKNFSNTKNYLPPEMKSFFTPGKPKAANVLGAVNKPLSS
AGKQSQSKSSRMETVSNASSNSNPSSPGRIKGRLDSTEMDHSENEDYTLGSPLPGKKNDK
RDDSEISELEKPRGRKKIITDPEEKLGMDDLNKLEQEPKLRSGQRGRKRAAAVSESEEPQ
WSEEKRLKEDVLESEDEQNSPPKKGRRGRPPKAASGTTQKEEPAVKTPKRGRKKATPVKP
VEEEEEGEEEEERQIENIEQKPKGRQYKTPRKAQQRSESSEISTTESNQSTPQKRRGRPP
KTPTSQPKKGRTARSKKTASKENESGEEMDVFQSIPPVEDISPEVEMEEEEVSTIKVRRR
TSKRERR
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggctcattctaagacaagagccaatgatggaaaaattacttatcctccaggagttaaa
gaaatatctgataaaatttctaaagaagaaatggtgcggcggttaaaaatggttgtaaaa
actttcatggatatggaccaggactctgaggaagaaaaggagctgtatctaaatcttgct
ttacatcttgcttctgattttttccttaagcatcctgataaagatgtacgcttgcttgta
gcatgctgtctagctgatatttttagaatatatgctcctgaagcaccatatacttcacca
gaaaaacttaaggatatatttatgttcataacaagacaactgaaaggattagaagacaca
aaaagccctcagttcaatagatatttttatttacttgagaacattgcatgggttaaatct
tacaacatatgctttgaactagaagacagcaatgaaattttcacgcagttatacagaaca
ttgttttcagtgattaacaatgggcataatcagaaggtccatatgcatatggtggatttg
atgggctccatcatttgtgaaggtgacacagtatctcaggagcttctggatacagtatta
gttaacctggtgcctgcacataagaacctgaacaaacaagcatatgacttggcaaaagct
ttactgaagaggacagcccaatctattgaaccatacattactaatttctttaaccaagtg
cttatgttaggaaaaacatctatcagtgatctctcagagcatgtttttgacttaattctg
gaactgtataatattgacagtcacctcctactctcagttttgccacagcttgaatttaag
cttaagagcaacgacaatgaagaacgccttcaagttgtaaagctgctagcaaaaatgttt
ggagcaaaagattcagaattggcatctcaaaacaaaccactctggcagtgctacttagga
aggtttaatgacattcacgtccccattcgtcttgaatgtgtgaaatttgctagtcactgc
cttatgaaccatccagatctagcaaaagatttaacagaatatcttaaagtgaggtctcat
gacccagaagaagccattagacatgatgttattgtatcaatagttactgctgctaagaaa
gacattctacttgtcaatgatcatctacttaattttgttagagaaagaacacttgacaaa
cggtggagagtgagaaaagaagctatgatgggacttgcacagatatacaagaaatattct
ttgcagtcggaagcaggaaaagaagctgcaaaacagattgcttggataaaagacaaactg
ctgcatatatattatcaaaatagcattgatgatcgattgctggttgaacgcatctttgct
cagtatatggtccctcataatttggaaacaaatgaaagaatgaaatacttatattacctt
tatgcaaccctggattcaaatgccgttaaggcgttgaatgaaatgtggaaatgccagaat
cttctgaggcaccaggtaaaggatctggttgacttaatcaagcagcccaaaacagatgcc
agcggtaaagctatattttcaaaagtgatggtaataacaagaaacttgccagatccaggc
aaagcacaagatttcatgaagaaattcactcaagttctagaagatgatgataaagtaagg
caccagctggaaatgcttgttagcccaacatgttcgtgcaaacaagccgaaggatgtgtg
agagaaattactaagaagttaggcaatccaaagcaacctaccaacccatttctggaaatg
ataaagttccttctggagaggatagccccggtgcacattgatacggaatccatcagcgcc
cttattaaacaagtgaacaaatctatagatggaacagcagatgatgaagatgaaggtgtg
cccactgatcaggcaataagggcaggtcttgaattgcttaaggtgctttcgtttacacac
cccatttcattccattcagctgaaacttttgaatccctcttggcatgtttgaaaatggag
gatgaaaaggtggctgaagccgcgttgcaaattttcaaaaacacaggaagcaaaattgaa
gaggacttccctcacatcagatcagcccttcttccagttttgcatcacaaagctaaaaaa
ggacctccacgtcaggccaagtatgccattcactgcatccatgcaatattttccagcaaa
gaaacccaatttgcacaagtatttgagccattacataagagtcttgatccgagcaacctt
gagcatctgattactcctctggtttccatcggtcacatagccttattggcacctgatcaa
tttgcagctccattgaagtccttggtagccacttttattgttaaagatttgctaatgagt
gacaggatgccaggaaaaaagacaactaaactttgggtgccagatgaagaagtttcccct
gagacgcttgtcaagattcaggccatcaagatgatggttcgatggttgctaggaatgaag
aacaaccacagtaaatcgggaacctccaccctgaggttgttaacaacaatattacacagt
gatggagacctgacagaacagggaaaaattagcaaaccagatatgtctcgcctgaggttg
gctgctgctagcgctattgtgaagctggcacaggagccttgttaccatgaaatcatcacg
ttagaacaataccaactgtgtgcattagcgattaatgatgagtgttaccaggttagacaa
gcatttgctcagaaacttcacaagggcttatcgaggctccggctaccactggagtacatg
gccatttgtgcactgtgtgcaaaggatcctgtcaaagagagaagagctcatgcgaggcag
tgcctggtgaaaaacataaatgtaagaagggaatatctgaaacaacatgcggccgtcagc
gagaaacttttgtcacttttaccggagtatgttgttccatatactattcacctgctggca
cacgatccagattacgtcaaaatccaagatattgatcaactgaaagacattaaagagtgt
ctttggttcatattggaaatattgattgctaaaaatgaaaataacagtcatgcctttatc
agaaaaatggtggaaaacattaagcagacaaaagatgctcaagggcctgatgatcccaaa
atgaatgagaaactgtacacagtgtgtgacatagcaatgaacatcatcatgtcaaagagc
acaacatacagtttagaatctcccaaagaccctgtacttccagctcgatatttcactcaa
cctgataagaatttcagcaataccaaaaattacctgcctccagaaatgaagtcatttttc
actcctggaaaacccaaagcggccaatgttcttggagcagttaataagcctctttcatca
gctggcaaacaatctcagtctaaatcatcacgaatggaaactgtaagcaacgccagcagc
aattcaaatccaagctcacctggaagaatcaaagggagacttgatagcactgaaatggac
cacagcgaaaatgaagactataccttgggttcgcctttgccagggaagaagaatgacaag
agagatgattctgaaatttcagagctggaaaagcccagaggcagaaagaaaattatcaca
gacccagaagagaagttaggtatggatgacctgaacaaactggaacaagaaccaaaactc
aggagtggtcagcgagggaggaaaagagctgcagctgtttcagagtctgaggagcctcag
tggtcagaggaaaaaaggctgaaggaagatgtcctagaaagtgaagacgaacagaatagt
ccgccaaagaagggaagaagagggcgacctccaaaggcagcaagtggaaccacacaaaag
gaagaaccggcagtgaagacgcctaaacgaggtagaaaaaaagccacaccagttaaacct
gtagaggaggaagaggagggggaagaggaggaagaaaggcaaattgaaaatatagaacaa
aagccaaaaggtcggcagtacaagacaccaaggaaagcacaacagagatctgaatcatct
gaaataagtacaactgagtctaaccagtctacaccacagaaaagacgagggagaccacca
aaaacaccaacctcacagccaaagaaaggaagaacagcgcggtcaaaaaaaactgcaagt
aaagaaaatgaatctggtgaggagatggatgtttttcagagtattcctcccgttgaagat
atttccccagaagtagaaatggaagaagaggaagtttccacaatcaaagtacgccggagg
acatccaaaagggaaaggcgatga
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