Sphaerodactylus townsendi (Townsend's least gecko): 125430990
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Entry
125430990 CDS
T08213
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125430990 (ZC3H12C)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125430990 (ZC3H12C)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
125430990
NCBI-ProteinID:
XP_048349401
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Position
LG04:27315289..27375070
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AA seq
856 aa
AA seq
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MGLKDHLGHDLGHLYEDSAETPMSAIAPWSMVEKPTMDKINSRKEDADKETSEETGSSSC
DSEESTNSDNESEQPATTGTKLCSLPKTHRQLCRSPCLEPHILQRNEILQDLKLEEARII
SKEIKKPPDVVKEYQTKLDFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTEM
DQSVSNVNASIMREASSVESQRSDSPLPEDVPMDGDNLRPIVIDGSNVAMSHGNKEVFSC
RGIKLAVDWFLERGHKGVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQ
GRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPP
DDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADEL
RAMSRNTATKAASEGGLVKSNSVPCSTKIDSTSDLKRVAPKRQSDPSIRTQVYQDLEEKL
PTKNKLETRSVPSLVSIPNSAAAKPQSSAPLSNGLPAGVHFPPQDQRPQGQYPPVMMATK
NHGTPMPYEQYPKCESPVDVGYYSMLSAYSNLAISGPRSPERCFSLDTDYRISSVASDCS
SEGSMSCGSSDSYVGYNDRSYVSSPDPQLEENLKCQHVHPHSHLNSQPFLQSYHDTLTRV
QNYSHEEPKHHHKPPLPYMAVHLQHPGLASRSSCPGDYPTPQSSQHSKNVHLGRALVSTR
IDSISDSRLYDNSPLRQRKCYSGQDGLGSWDRQGYGIDTYGYRQTYSLPSNPSQPCYEQF
AFQSLPEQQDQPWRIPYCGMPQDPARYQDSREKVYINLCNIFPPDLVRIVMKRNPHMTDA
QQLAAAILVEKSQLGY
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcacttggggcatgacctcggccacctctatgaggacagtgctgag
acaccgatgagtgcaattgcaccttggtcgatggtggaaaaaccaaccatggataaaata
aactctaggaaggaggatgcagacaaggaaacctctgaagaaactgggagctccagttgt
gattcggaggagagtacaaattctgataatgaatcagagcaaccagccaccactggaaca
aaattgtgctcgctgcctaagactcacagacaactgtgcagatctccttgcttggaaccc
catatactacaacgcaatgaaatcttgcaagaccttaagctagaagaagcccgtatcata
tctaaagaaattaagaaaccccccgatgtggtcaaagaatatcaaaccaaactggacttt
gcactgaagttaggttactctgaagaacaggttcagcttgtactgaataagctcggtact
gatgctttaatcaatgatatactgggagaacttgtcaaacttggaaataaaactgagatg
gatcagagcgtaagtaacgttaatgctagcataatgcgggaagcgtcttctgttgaatct
cagcgatctgactctccccttccggaggatgtgccaatggatggtgataacctgagacct
atagttattgatggcagtaatgtggcaatgagccatggaaacaaagaagtattctcttgt
cgggggataaaactggcagtggactggtttttggaaagaggccataaaggtgttacagtg
tttgtgccagcatggagaaaagaacagtcacgaccagatgctctcattacagaccaagaa
atcttacgtaaattagaaaaggagaaaattctggtgttcaccccatcccgccgtgtgcag
gggagaagggtggtatgctatgacgacaggttcatagtgaaattagcctttgagtcagat
ggtataattgtatctaacgataactacagggatctcgctaatgaaaagccagaatggaag
aagttcattgatgagcggctgctgatgtattcatttgtcaatgacaagttcatgcctcct
gatgatcctcttggccgtcatggcccaagtctggataattttttaaggaagaaacctatt
gtaccagagcataagaagcaaccatgtccatatgggaagaaatgcacttatggacacaag
tgcaaatactaccatccggaaagagggaatcagcctcagaggtcggtcgccgatgaactt
cgtgccatgtctaggaacacagctaccaaagctgctagtgaaggagggctggtgaaaagc
aacagtgttccttgtagtactaagattgatagcacttcggatctcaaacgagttgctcca
aagaggcaatcagatcctagtataaggactcaagtctatcaagacttggaggaaaagctt
cccaccaaaaacaagttggaaaccaggtctgtaccttctttagttagtatcccgaattct
gctgctgcaaaaccccaaagtagtgcacctttgagcaatggccttccagctggagttcat
ttcccacctcaggatcaaagaccacagggacagtaccctccagtgatgatggcaaccaaa
aatcatggaacgccaatgccttatgagcagtatcccaaatgtgagtctcctgtggatgta
ggctactattcaatgctaagtgcatattcaaacctggctatctctggcccacgaagtcct
gaaaggtgtttctctttggacacggattacagaattagttctgtagcctccgattgtagt
agcgaaggaagcatgagctgtggcagcagcgactcctacgtcggctacaacgatcggtcc
tacgtgagctctcctgaccctcagctggaagagaatttaaagtgccaacacgtacacccc
cacagtcaccttaactctcagccgttcctgcaaagttaccacgatacgttgacaagggtg
caaaattacagtcacgaagaaccaaagcatcatcacaaacctccacttccatacatggct
gtacaccttcagcatcctggtcttgcgtctcgctcgagttgtcctggtgactatcccaca
ccccagagttcccagcattctaagaacgtacatctaggaagagcccttgtgtccacaaga
atagacagcatatccgactctcgtttgtacgacaactccccattaaggcaaaggaagtgt
tactctgggcaggatggactgggtagttgggacaggcaaggctatgggattgatacttac
ggctatcgccagacttactctttgcccagcaacccttcccagccgtgttacgagcagttt
gccttccaaagtttacctgagcagcaagatcagccttggcggataccttactgtgggatg
ccgcaggatcccgcaaggtatcaggacagccgggagaaggtctatataaacctgtgcaac
atctttcctccagaccttgtgagaatagttatgaaaagaaatcctcacatgactgatgct
cagcaactggcagcagccattttagtggaaaaatctcagctaggttattga
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