Sphaerodactylus townsendi (Townsend's least gecko): 125431000
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Entry
125431000 CDS
T08213
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow00260
Glycine, serine and threonine metabolism
stow00630
Glyoxylate and dicarboxylate metabolism
stow00670
One carbon pool by folate
stow01100
Metabolic pathways
stow01200
Carbon metabolism
stow01230
Biosynthesis of amino acids
stow01240
Biosynthesis of cofactors
stow04981
Folate transport and metabolism
Module
stow_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125431000 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125431000 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125431000 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125431000 (SHMT1)
Enzymes [BR:
stow01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125431000 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
FF
Motif
Other DBs
NCBI-GeneID:
125431000
NCBI-ProteinID:
XP_048349423
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Position
LG04:complement(148298864..148310761)
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AA seq
486 aa
AA seq
DB search
MADFANADGDRISPDLWTSHNKMVLEPLDTNDPEVYEIIRKEKRRQRLGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALEAYGLDPQKWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPET
GYIDYDRLEENARLFHPKLIIAGVSCYSRNLEYARMRKIADENSAYLMADMAHISGLVAA
EVVPSPFEHCDVVSTTTHKTLRGCRAGMIFYRKGVRSIDPKTGKEIPYNLESLINQAVFP
GLQGGPHNHAIAGIAVALKQAMTPEFKIYQKQVVANCKALAKALMSLGYHIVTGGSDNHL
ILVDLRSQGTDGGRAERVLELCSIACNKNTCPGDKSALRPSGLRLGTPALTSRGFVEKDF
QKVAHFIHKGIELTVRVQKDMSPKATLREFKEKLVSDEKYQAALKSLKEDVEAFAESFPL
PGLPVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctgactttgcgaatgctgacggcgatcgtatcagcccagatctctggacttctcac
aataagatggtgctggaacccttggacaccaacgaccccgaggtgtacgagattatccgg
aaggagaagcgccggcagcgactcgggttggagctgatcgcgtccgagaattttgcgagt
cgcgcggtcctggaagctttgggctcctgtatgaacaacaagtactcagaaggctaccca
gggcaaagatactacggcgggacggagtttgtggacgaattggagaggctgtgccaaaag
agggctctggaggcttacgggttggacccgcagaagtggggagtcaacgttcagccctac
tcagggtctcccgcaaactttgccgtatacaccgccttggtggaacctcacggcagaatc
atggggctggatttgcccgacgggggccacctgacacatggcttcatgacagacaagaag
aagatctcggccacctcgatcttcttcgaatccatgccgtacaaggtcaaccctgagacg
ggatatatcgactatgaccgtctggaggagaacgcccgcctgttccacccaaaactgatc
atcgcaggggtcagctgctattcacgtaacctggaatacgcccgcatgaggaagatcgcc
gatgagaacagcgcgtacctcatggccgacatggcgcacatcagtggcttggtggccgct
gaggtggtgccgtcgcccttcgagcactgcgatgtggtctccaccaccacccacaaaacc
ttacgggggtgccgggcaggcatgatcttctacaggaaaggagttcgcagcattgacccc
aaaactggaaaggaaatcccgtacaacctcgaaagcctcatcaatcaagctgtgtttcca
gggctgcaggggggcccacacaatcatgccattgcaggaattgccgtggccctgaaacaa
gccatgactccggaattcaagatttaccagaagcaggtggtggccaattgcaaagccctg
gcaaaagcactcatgagcttggggtaccacattgtgaccggggggtccgacaaccatctg
atcctggtggacctgcgcagccaaggaacggatggtggccgagcggaacgggttctcgaa
ctgtgctcgatcgcatgcaacaagaacacctgcccaggagacaagagcgctttaaggccc
agcgggctgaggctcgggaccccagcgctgacctccaggggctttgtggaaaaagacttt
caaaaagtagcgcacttcattcataaaggtatcgaactcaccgtgcgggtccagaaggac
atgagccccaaagcgacgttgcgggagtttaaggaaaagctggtctctgatgagaagtac
caggcggccctgaagtccctcaaggaagacgtggaggcctttgcggagtcttttcccctc
cccgggttgcccgttctgtaa
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