Sphaerodactylus townsendi (Townsend's least gecko): 125431078
Help
Entry
125431078 CDS
T08213
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125431078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125431078
03036 Chromosome and associated proteins [BR:
stow03036
]
125431078
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125431078
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125431078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125431078
NCBI-ProteinID:
XP_048349598
LinkDB
All DBs
Position
LG04:complement(7346240..7413364)
Genome browser
AA seq
1567 aa
AA seq
DB search
MFNKSFGTPFGSSTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGTNNNTGGLFGSTQAKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQSKPVGFGN
FGTSTSSSGLFGTTNTTSNPFGGTSGSLFGSTSFTTVPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATPGLFGSSTATSSAAT
GLFGSSTTNTGFSYGQNKTGFGTSTTGFGAGAGSLFGQTQQTTSLFNKPFGQPTTAPNTG
FSFGNTGTLGQPNTNTMGLFGATQPTQTGGLFGTTANTNTATAFGTGTSLFGQAGTGFGV
GGSSLFSNKPAGFGTTTTSAPSFGTTTGSLFGFGANTTGNSLFGNKPAAGPLGTGLGTGF
GTALSAGQTSLFGSAQPKLGGTLGTGAFGAPGFNTATASLGFGAPQPAVALTDPNASAAQ
QAILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKKSIKKLVLKNLNSNSLFSPVSGE
AEDLASPSEYPENGERFHFLSRSVDENHRPDGEQLEEEEEDCHKVTRFYTNPIAKPIPQT
PESALHKHQNHLDDTIMALNMRAALRNGLEGSSEDASFHEESLQDDREEENENSHLAHPA
GIRLTRMGYYTIPSMEELARMTNDKGECVVTDFTIGRKGYGSIYFEGEVNLTNLDLDEIV
HVRRKEVIVYPDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRALIKSPERLAEMNYEGRL
EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTEAKKLKTAQAPPL
GRAQQVALSGKPGPSSQSPDIEPLGKAVELDSDMADVTQEAALESAAEESLGEEQDLVPA
STHIASSLEINPHTLQIMKASLLVDEEDLDLILDHGFGRQLTPVDTPPAICSPRVPISSS
SRGPRSRPSVGGLLQSRLLSGSFLLPTASPQDGRSLRTSSLGGAPPVPPWPMLSPLASAF
TVSRPAPDVSLKVVGTRRQPGLVPLEKSVAYGKGKLLMDMALFMGRSFRAGWAPNWTLVH
NGEQLSSFSDPAANRDESMEFGFLPAPVAPKPLSESPFKVHVEKLSLEGKAAYGDHGSYL
VPLEIKLKHSTVHVDEPCPFLAPNPGEMAIHEYASWARQASGDPEEGEAVVKHWCLVWTL
CEALWGRLTELEAHLKEPSEYIVALERRKAFSQWLSQTAAERIEDEVSVSQHDSPAEAVF
SYLTGKRISEACGLAQRSGDHRLALLLSQLVGSQEVRELMAMQLADWHQLQADSFMQEER
LRIFALLAGKPVWHLSEKRSINICSQLDWKRTVGVHLWYLLPSTAPLSQALSMYEAAFQD
SSASERYACSPLPPYLEGTGCEAEEGDSQRSVQDVCFHLLKLYSDRCYDLHQLLDPRSTT
ADPLDYRLSWHLWEVLRALNYTPLCRRKQGVLESPARHAAQLLRKREGCGEWASPSDSPH
PSLNAKR
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttgggacgccttttggaagcagcacagggggctttgggacaacg
tcaacttttggacagaacactggcttcggcacgaccagcggaggtgcatttgggacatct
gctttcgggacaaacaataacaccggaggactctttgggagcacacaggccaagccagga
gggctgtttggttcaagcacgttcagccagccggccacatcctccacaagtaccggcttt
gggttcggaacatcgacagggacttccagtggcttatttgggactgcgagcactggagga
ggcctcttctcatcccagaacaatgcctttgcacaaagtaaaccagtggggtttggcaac
tttgggacgagtaccagcagtagcggtttatttggaaccacaaacacgacgtccaacccg
tttgggggcacatctggatccctcttcggatcgaccagcttcaccactgttccgactggc
acgaccattaaattcaatccgccgaccggcactgacacgatggtcaaatccggagtcagt
acaaacatcagcacaaagcatcagtgtattacggcaatgaaggaatacgaaagtaaatct
ctcgaggagcttcgcttggaagattatcaagcaaaccgcaaagggcccaccaaccccgta
ggagctggagcgactccagggctcttcggatcgtccacagctacgtccagtgctgccacg
gggctgttcggctcctccacgacgaacactggcttttcctacgggcagaataaaacgggc
tttggaaccagtacgacaggttttggagcaggagcaggaagcctctttgggcagacgcag
caaacgaccagcctcttcaacaagcccttcggtcagccgacaacagcgccgaacaccggt
ttttcgttcgggaacactggcaccctcgggcagcccaatacgaacaccatgggcttgttc
ggagcaacgcagccaactcagactggaggcctctttggaaccactgcaaatacgaacaca
gcgaccgcctttggaacagggacgagtctgttcggacaagccggcacaggatttggtgtg
ggcggctcgtccctgtttagcaacaagccagctggatttggaaccacaaccaccagcgcg
ccctccttcggaacaacgaccggcagcctctttgggtttggggcaaacaccactggaaac
agcctctttggaaacaagcctgcggccggacctctgggaactggacttggaacaggattt
gggacagcccttagcgcagggcagacttcgttgttcgggagtgcccagcccaaactagga
ggcactctggggacaggagcgtttggggcccccggatttaacacagcaacagccagcctg
ggctttggagctccccaacctgctgtggccctgacggatccaaacgcatcggcagcccag
caagcaattctgcagcagcacctcaacagcctgacctactcgccttttggggactctcct
ctgttcagaaaccccatgtctgatccaaagaagaaggaagagagactgaagccgaccaat
cctgcggcccagaaggccttgaccacgcccactcactacaagctgactccccgtcctgct
acaagagtgcggccgaaagctttgcagacgacgggatcctctaaatcccacctctttgat
ggcctggatgacgacgagccggccttgtccaacggggctttcatgcccaagaagagcatc
aagaagctagtcctgaagaatctcaacagcaacagtctgttttctcctgtcagcggtgaa
gcggaagacctggcctccccctctgagtatccagaaaatggggaacggttccacttcctc
tccaggtcagtcgatgagaaccaccggcccgacggagagcagctggaggaggaggaggag
gattgccacaaggtgacccgcttctacaccaaccccatcgcgaagcccatcccgcagact
ccggagagcgccctccacaagcaccagaaccacctggacgacaccatcatggccctgaac
atgcgagccgccctgcggaacgggctggaaggcagcagcgaggatgcctccttccatgag
gagtccctgcaggatgaccgggaagaggagaatgagaattcgcacctggcacacccagca
gggattcgtttaacccgaatgggctactacacgattccatccatggaggagctggccaga
atgactaacgataagggagagtgcgtggtgaccgacttcaccatcggccggaaaggctac
ggctccatctacttcgaaggggaggtcaatctgaccaatctagaccttgacgagattgtg
cacgtccgccggaaagaagtgatcgtgtacccagatgatgagctgaagccgcccgttgga
gaaggtctaaacaggcgagccgaagtcactttggacggtgtttggccgaccgacaaaacc
tctcgtgccttgatcaagagcccggagcgcctggcagagatgaactacgaaggccggctg
gaggccgtctctcggaagcagggtgcccagttcaaggagtaccgcccggagactggctct
tgggtgttcaaggtgtctcacttctccaaatacggcttgcaagattccgacgaggaggag
gaggagcatccatccaagacggaggcgaagaagttaaaaaccgcccaggcccctcccctg
ggccgggcccagcaagtggctctgagtgggaagccggggccctcctcccagagccctgac
atcgagccgctggggaaggccgtggagctcgacagcgacatggcagatgtcactcaggag
gctgctctggaatccgctgcggaggagagcctgggcgaggagcaggacctggtgccggct
tccacccacattgcgtcctctctggaaatcaaccctcacaccttgcagatcatgaaggct
tcccttcttgtggatgaggaggatttagacctgatccttgatcatggttttggtaggcag
ctcacccctgtggacacccccccggcgatctgttctcccagagttccaatctcctcttct
tcccgaggaccgaggagccgtccctcagttggcgggctgctgcagtcgagactgttgagt
ggatccttcctccttcccactgcttcccctcaagacggtcgcagtctgaggacgtcctcc
ctcggtggtgccccgcccgtgccaccctggcccatgctgtctccgctcgcttctgctttc
acagtatcccgccctgcacccgacgtatcattgaaagtggtgggtacccgcaggcagcct
ggcctggtacccctggaaaaatctgtggcctacgggaaaggaaagctcctgatggacatg
gcgcttttcatgggacggtcgttccgcgccggctgggcgcccaactggactcttgtccac
aacggggagcagctgagcagcttcagtgatccggcagccaaccgcgacgagtccatggag
tttggattcctgcctgcacccgttgctcctaaaccgctctcggagtcccccttcaaagtc
cacgtggagaagctgagtttggaagggaaggcggcgtacggcgaccacggctcgtacctg
gttccgctggagatcaagttgaagcacagcacggtccacgtggacgagccatgccctttc
ctggcgcccaaccctggagaaatggccatccacgaatacgcctcgtgggctaggcaggca
tctggagacccagaggagggggaagccgtggtgaagcactggtgcttggtgtggaccttg
tgcgaggcgctttggggccgcctgacagagctggaggcccacttgaaagagcccagcgag
tacatcgtggccctggagcgccggaaggccttctcccagtggctctcacagacggctgcc
gagcggatcgaggacgaggtttccgtcagccagcacgacagtcctgcggaggccgtcttc
agctacctgaccgggaagcggatcagcgaagcctgtgggctggcccagcggtctggggac
cacaggctggccctgctcctctcccagctggtgggcagccaggaggtccgggagctcatg
gccatgcagttggcggactggcaccagctgcaggcagacagcttcatgcaggaggagagg
ctgcgcatctttgcccttctcgctggcaagccggtgtggcatttgtcagagaagaggagc
atcaacatctgttcccagctggactggaagcgcactgttggcgtccacctctggtacctg
cttccctccactgcccccctttcccaggccctcagcatgtacgaagctgcattccaggac
tcttctgccagcgagaggtacgcttgttctccgttgcctccgtacctagaaggcacaggc
tgtgaggccgaggaaggcgactcgcagcgctccgtgcaggatgtctgctttcacctgtta
aagctgtacagtgacaggtgctacgatctccatcagctgctggacccgaggagcaccacc
gccgaccccttggactatcgtctcagttggcacctgtgggaagtgctgcgtgccttgaat
tacaccccactctgtcggagaaagcagggagtgctggaatcgccagctcgccacgccgcc
cagctccttcgaaagagggagggctgtggggagtgggcgtcgccttcagactctccacac
ccatcactcaacgccaagcggtaa
DBGET
integrated database retrieval system
