Sphaerodactylus townsendi (Townsend's least gecko): 125431106
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Entry
125431106 CDS
T08213
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125431106 (RBBP6)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125431106 (RBBP6)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
U-box type E3
125431106 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125431106
NCBI-ProteinID:
XP_048349673
LinkDB
All DBs
Position
LG04:complement(148720240..148750341)
Genome browser
AA seq
1741 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKCASKTYVISRTDPVSGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPPGPPPPTYTCFRCGKPGHYIKNCPTIADK
NFESVPRIKKSTGIPRSFMMEVQDPTTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EDPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESEEHTCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQPQPPRQTASRNAPSMPRAGMSRQQD
PLMVPPSSAPGHAAAPLALPLASATAALPINPAAGEVLPASVSMAVHPDKPEGLFREGDG
IGPAAASEHSKPPSSLSVNTVMEEKGYQVPVLGQLGPHGHSIPSMGQPMRPNPVRSAGSR
SGWEPSSNRGRPHSDRTQRTQAPTLPASTQVFVPVPPPPPPLYPPPPHALPLPPGVPPPQ
FPPQFPPGQPPPAGYTVPPPGYPPAPANISTPWVPTSVPTAHSNAIPTTQPPPLSREEFY
REQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSYSRSKSPYSASSYSRSSYTY
SKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPP
YRRYHSRSRSPVYRGQSPNKRPVSQGEGEREYFNRYREVPAYDVKAFYGRPADLRGDPFE
KDRFREWENYREWCEKYYKGFPTGAQPRPLLNRENFSPERFGPPGPRRENSPYIRGRRDE
YPGGLGHRNRGTGPSYSEKLPAREGHAMKEMAKLKEKEVENAPGDGRGNRHKKHRKRRKG
DEGEGLLPSADLLEGSRKPRDPAAGEDGKPEPLFMLPSRDDATPVRDEPMEADSVAFKPV
SDKERKEKPKARTEKAKRKAEGTATPKKDAVAKPTKAAPEKSEADREKSPRAEFLSRKVK
EELPKAESSKSSSQKDEKSLGAPRKVHPRATKEHPETRSAKDEKAKKEPPKEIKVEKQPP
SKEEKTKKPTDRSKAVEAKAEKRKRKVEEKAETDQEAATAAGKPDVAELKPSPKGQAEPE
GEKAARSPEKEKVVSLVVPAKKIKLNRETGKKIVSAENVPPLKEPPAEKPEPTSSSSSSS
KGKAEKTKGKLKRKVVAGDGAPSTLVDYPSTSSAGGSPVWKSEEKPDTKRTVIKTMEEYN
NDIMAPAEDVIIMIQVPQSKWDKDEFDSEEEEEEVAKSTQVSSMVGKPASVIKNVSTKPP
VKHNEKDPEPLEKNQRASKESGHESSLPDPKSSKNTSLNEKGKARDRDSSASDRESLEKK
KGGIQPEKDRLEQGTVKSSSSHSSKESRSSEKPDSTLGSSARAFTPTWDKKSDCDGSRDH
SGSKRRDERSEVSRKKDSPSRSREPASSVQKNKLRDERSDQVKKGAKDSRRSSYSPPRDR
RPSDHKAAYESKHPAERRRSQERGSGKEREKGPSSETRSNKEKVGGGSKPVHRRCSPETR
ELNDKSISKPKPQPSHSTRMSSDPTRETDEAAFVPDYNESDSDSHTSAKEDDFPGRSFRD
GKEKATLKPQEPVAAAAVPAALPGGSSQSSPSASQSPSGSQGRSSSASSADSQDSKKKRK
KKEKKRHKKHKKHKKHKKHAGVEADAERSQKHKHKKKKSKKSKDKEKEREDQKPKAVAVA
V
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtccactacaagttctcgtcgaagctcaactacgacacggtcaccttcgac
gggctccacatctcgctctgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gcggccgactgcgacctccagatcaccaacgcccagaccaaggaagaatatacggatgat
aatgccctgattcccaagaactcatctgttattgtcagaagaattccaattggtggagtg
aagtgtgccagcaaaacctacgtcataagtcgaacggatcccgtgagtggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagaccgccaatctg
gctgaagccaatgcttccgaagaagataaaattaaagctatgatgtcacagtctggccac
gaatatgatccgatcaattatatgaagaagcccccgggtccgcctccaccgacatacact
tgcttccgttgtgggaaacctggccattatatcaagaactgcccaaccattgcggacaag
aactttgagtctgttcccaggattaaaaagagcacaggaatccctcgaagctttatgatg
gaggtgcaggaccccaccaccaagggcgccatgttgaccaacacagggaaatacgccatc
ccgaccattgatgcagaggcctatgctattggcaagaaagaaaagccccctttcttgccg
gaagatccgtcttcttcatcagaagaggacgatccaattcccgatgagctgctgtgtttg
atctgcaaagatataatgactgacgccgtggttattccctgttgtggcaacagctattgc
gatgaatgtatcagaacagccctcctggaatcggaggaacacacctgcccaacttgtcac
cagacagacgtgtctcctgatgctttaattgccaacaagtttttgcgccaggctgtcaat
aatttcaagaacgaaactggctacacgaaacggctgcgcaagcaaccccagccccctcgg
cagacggcttcacggaacgcaccttccatgccgagggcaggcatgtcaaggcagcaagac
cccctgatggttcccccctcctctgctcctggtcatgccgctgcacctcttgccttgccg
ctggcatcagccacagcagcgctgcccatcaatccggctgccggagaggtcctcccggcc
tccgtatccatggctgttcacccagacaaacctgaaggactgttccgggagggtgacggt
ataggtccagcggctgcctcagagcactcaaagccgccttcctcgttgtctgttaatact
gtgatggaggagaagggctatcaggttcctgtgctggggcagctgggccctcatgggcat
tccatcccctccatgggtcagccaatgagacctaaccctgttcgctctgcaggcagccgg
tctggctgggagccaagttcaaaccgaggacgcccgcatagtgaccgcacacaaaggact
caggccccaacacttccagcctccacccaagtgtttgtgcccgtgccgcctccgcctccc
cccctgtacccgcctcccccccatgcacttcctcttccaccgggggtgcctccgccacag
tttcctcctcagtttccaccgggtcagcctccacctgctgggtacacagttccccctccg
ggataccccccagctccagcaaacatatcaacaccttgggtaccaacatccgtgccaacg
gctcactcaaatgccatcccaacgacacaacctcctcctctatctagggaggagttttac
agagagcaacggagactaaaagaggaggaaaagaaaaagtcaaaacttgatgagtttaca
aatgattttgctaaggaactgatggaatacaaaaaaatccagaaggagcgcaggcgttct
tattcccgctccaaatcgccatatagcgcatcttcatattcaagaagctcttatacatac
tccaagtcacgatccggctcgtcccgctcaaggtcgtactcccgctcgttcagccgctcc
cactcccgctcctactcccggtcgcccccatacccacggaggggcagggggaaaagccga
aattaccgttccaggtcacgatctcatggatatcatcggtcgaggtcgaggtcgccaccc
taccggaggtatcattcacgatcaaggtctccagtttacaggggccagtccccaaataag
cgccctgtttctcagggagaaggggaaagggagtacttcaaccgataccgagaagtccct
gcctatgacgtgaaagccttctatgggaggcctgcagacctgagaggagacccctttgaa
aaggacagattccgtgaatgggagaactacagagagtggtgtgagaaatattacaagggc
tttccgactggagcccaacccagacctctgctgaacagagagaacttctcgccagagcgc
tttgggcccccaggacctcgccgagagaattctccctacattcgagggcggagagatgaa
tacccaggaggactaggccatcggaatcgtggcacaggccccagctattctgaaaagttg
ccagcccgggagggccacgctatgaaagaaatggccaaactgaaagagaaggaggtggaa
aatgcccccggagatgggagaggaaatagacacaagaagcaccggaagagaaggaaggga
gacgagggcgaaggccttcttcccagtgctgacctcttggaaggctcacggaaaccaagg
gaccctgctgcaggggaagatggcaaacctgagcctctcttcatgctcccaagcagggac
gatgccacccctgtccgggacgagcccatggaagccgattcagttgccttcaagcccgtg
tcagacaaggagaggaaggaaaagccgaaggccagaactgagaaggccaagcgcaaagca
gaaggcaccgccactcccaagaaagacgctgtggcaaaacccacaaaagcagccccagag
aaatctgaggcagatcgtgaaaaatccccacgggctgagtttctgtccagaaaagtgaag
gaggagttacccaaggctgagagcagcaaatcatcctcccagaaggacgagaagtccctt
ggcgccccacggaaagtgcacccccgagccacaaaggaacatccagagaccaggtcagcc
aaggacgagaaagccaagaaggagccccccaaggaaatcaaagtggagaagcagcccccc
agcaaggaggagaagaccaagaagcccacagacaggagcaaagctgtggaggcaaaggcc
gagaagaggaagaggaaggtcgaggagaaagcagagacggaccaggaagctgccacagca
gcaggcaagccagacgtcgcggagctgaagccctcgcccaagggccaagcggagcctgag
ggggaaaaggcagccaggagccctgaaaaagagaaggtggtttcactggtggtgccggca
aagaagatcaagctgaaccgagaaaccggcaagaagattgtcagtgctgagaatgtgccc
cctctcaaagagccccctgctgagaagcccgagcccaccagcagcagcagcagcagcagc
aaagggaaggccgagaagaccaaagggaagctgaagaggaaggtggtggcaggggacgga
gccccctccacactggtcgattatcccagcaccagctctgctggaggcagccccgtgtgg
aagtcggaagagaaacccgacaccaagcgaactgtcattaagacgatggaagaatataac
aacgacatcatggctcctgccgaggacgtcatcatcatgatccaggtgcctcagtccaaa
tgggacaaagacgagtttgactcggaggaggaagaggaagaggtggcgaagtcaacacag
gtttcttccatggtggggaagcctgcgagcgtcatcaagaacgtcagcacaaagcccccc
gtcaaacacaacgagaaggatcccgagcctttagagaaaaatcagagggcctcaaaggaa
tctgggcatgagagttccctgcctgaccccaaaagctctaaaaatacgtctttgaatgag
aaagggaaagcgagggaccgggacagttctgcctcggacagagagtctttggagaaaaag
aagggcgggatccagccagagaaggatcgccttgagcaaggaacggtgaagagcagctct
tctcactcttccaaagagagcaggtcttcggaaaagccagactccacccttggatcttct
gccagggccttcacgcctacttgggacaagaagtctgactgtgacggcagcagagaccat
tcaggctcaaagcgaagagacgaacggagtgaggtctcccggaagaaagactccccttcc
cgaagtcgggagcctgcctcttctgtacagaaaaataagctgagggacgagcggtcagac
caggtgaaaaagggagccaaggactcccgacggagcagctacagccctccaagggaccgg
aggccgagcgaccacaaggctgcctacgagtccaagcacccagcagaacggcgcaggtcc
caggagagaggctcggggaaagagagagagaaggggccgtcctctgagaccagaagcaac
aaagagaaggtgggtggtgggagcaagccggtgcacagacgatgctccccagagacaaga
gagctgaacgacaagagcatctccaaaccaaagcctcagccaagccactcgacccggatg
tcttctgacccgacgagagaaaccgacgaggctgcctttgtcccggactataatgagagt
gacagcgacagccacacatctgccaaagaggacgacttcccaggcagaagcttccgggac
gggaaggagaaggccaccctcaaacctcaagagcctgtggcggcggcggcagtgccagcg
gccctgcccggtgggagcagccagagcagccccagcgccagccagagtccctcggggagc
cagggccgcagcagcagcgccagctccgcagacagccaggacagcaagaagaagcgcaag
aagaaggagaaaaagaggcacaagaagcacaagaagcacaagaagcacaagaagcacgca
ggtgtcgaggcggatgcggagagaagccagaaacacaaacacaagaagaagaagtccaag
aagagcaaagacaaggagaaggagcgggaggaccaaaaacccaaggcggtggctgtggcc
gtctga
DBGET
integrated database retrieval system
