Sphaerodactylus townsendi (Townsend's least gecko): 125431334
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Entry
125431334 CDS
T08213
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125431334 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125431334 (MID1)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125431334 (MID1)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125431334 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
COS
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125431334
NCBI-ProteinID:
XP_048350055
LinkDB
All DBs
Position
LG04:87380015..87503918
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AA seq
645 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
YVITLNQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVMAGFAQLGFPQCVGAMDGCHVPIKNPSDAPGQYVNWKKLCLHCPDGG
LRPQGTVLQSRDWKPRVAMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTAP
NPPTIREELCTASYDTITVHWTSDDEFSVASYELQYTIFTGQANVVSLCNSADSWMIVPN
IKQNHYTVHGLQSGTKYIFVVKAINQAGSRNSEPGKLKTNSQPFKLDPKSAHRKLKVSHD
NLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGISYKSA
PRHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPHLRRIGILLDYDNGSLAFYDALN
SLHLYTFDITFAQPVCPTFTVWNKCLTIITGLPIPDHIDSSEQVP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaggatcca
ctgctgctgccttgtgctcacagtctctgtttcaactgcgcgcatcgcatcttggtctcc
cactgtgccaccaacgaatcagtggagtcgatcaccgccttccagtgccctacttgtcgt
tatgtcatcactctcaatcaacgtggtctagacggactcaagcgcaacgtcacactgcag
aatattatcgacaggtttcagaaagcatccgtgagcgggcccaattctcctagtgaaact
cgccgtgagcgggcttttgatagcaacagcatgtcctccagtgagaaagttctctgccag
ttctgtgatcaggatcctgctcaggaagcagtgaagacctgtgtaacttgtgaagtatcc
tactgtgaggagtgcttaaaggcaactcacccaaacaagaagccatttactggacatcgt
ttaatcgagcctattccggactcacatattagaggattaatgtgtctggagcatgaggac
gagaaagttaacatgtattgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttgggaggcatcgtgatcaccaggtggctgctttaagtgagcgctatgacaaactaaag
caaaatttggaaagtaatctcactaaccttatcaagagaaatactgaactggaaacactt
ttggctaaattaattcaaacctgccaacatgttgaggtcatggcgggatttgcccagctg
ggcttcccccaatgtgtgggagccatggatggatgccatgttcccatcaagaatccttct
gatgcaccggggcagtacgtgaattggaaaaaactttgcctccattgtcctgatggcggt
ctgcgaccacaagggacggttcttcaaagtcgagattggaaacccagagtcgccatggca
actgcatcttcccaggtgctaattccggaaataaatctcaatgatacttttgacaccttt
gctctagattttaccagagaaaagaaactactggaatgccttgattatcttacagctcca
aatccgccaacaattagagaagagctctgtacagcttcttatgacacaattacagtgcat
tggacttctgatgacgaattcagtgttgcttcctatgaactgcagtacacaatcttcact
ggacaagccaatgtagttagtctgtgtaattcagccgacagctggatgattgttccaaat
attaaacaaaaccactacacggtccatggtctgcagagtggcaccaagtatatcttcgtt
gtgaaggccattaatcaggctggcagccgaaacagcgagccaggaaaactgaagacaaat
agccagccattcaaactggatcccaagtctgctcatagaaaactaaaggtatctcatgac
aatttgacagtggaacgtgatgaaacttcttctaaaaagagccatacacctgagcgtttc
accagccaagggagctatggagttgctggcaatgtgttcattgacagtgggcggcattac
tgggaagtggttataagtgggagtacatggtatgccatcggtatttcttataagtcagca
ccaagacatgaatggattggaaagaattctgcttcttgggttctttgtcgttgtaataat
acatgggtggtgaggcataacagcaaagaaattccaatagagccagcaccccatcttcgc
cgtatcggcattttgttggactacgacaatggttccttagcattttatgatgctttgaac
tctctacacctttacacttttgacattacatttgcacagcctgtgtgtccaacgttcact
gtctggaataagtgtttgacgattattacgggccttcctatcccagatcacatagattcc
tctgagcaggtaccctga
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