Sphaerodactylus townsendi (Townsend's least gecko): 125431371
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Entry
125431371 CDS
T08213
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stow01001
]
125431371 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stow04054
]
125431371 (CIITA)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125431371 (CIITA)
Protein kinases [BR:
stow01001
]
Serine/threonine kinases: Other
TAF1 family
125431371 (CIITA)
Pattern recognition receptors [BR:
stow04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125431371 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NLRC4_HD2
LRR_8
AAA_16
NB-ARC
nSTAND3
LRR_9
nSTAND_NTPase5
LRR_Zer-1
NPHP3_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125431371
NCBI-ProteinID:
XP_048350090
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All DBs
Position
LG04:complement(139875086..139918898)
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AA seq
1130 aa
AA seq
DB search
MNLFQEILPGVREVLANASAVQIQVLLNLMAESGTISQEYHQTLLHEKDREDLARKICLT
LVGRQDVHQDSFASHSSLQFCGDNHGDASTGTGSLGDSTMSSGIQPAKGYLDLLHSDTDP
LILFKSIEEDHPSDHAPDATLDDQDNNPDVFYTVESNDSGEEVCLRSSTREAYEKIAKLV
EYVLEEEPAEDLFAGSLDSDDATSEGCSEPKKQCLCSGSSSLAASPMDTSPAEAVSLSSV
HVQFSLTTIAPAGRLPKMFRPPDPVFDTMILTFLPPSPVVNLPLGPAVLDINICPAEDAI
YKAPQIRPLPSEKAFKRPDIVDTFSMRLKTSFGERCRFVPSEQDAPVDSLYVECDMVRRH
IENRSGRNADLRICDLEEKEMTTVESLFQMLEKHELGSNKVFLVLGKAGMGKSLLAQKIC
LDWSHGKFAQFKFVFQFDCRQLSLLHGKHYSLRQLLFEFSVGSQNRADNDVYRYLLRNPD
EVLLIFDGFEELQDLEGSSPCLDSLPRKEPRGTSAILAGLFQKKVLNGCVMLLTSRPKEK
LHQYLPRVDKCMELMGFSLPQAEAYLARYFEGSSYCRDAANLIKSSPYLFSYCYNPDLCR
IVCFVCKSALESGGGEVPSSLTGLLVRFFLQKLGPSTNEATSPEHQNISTLAQVAWSLGQ
DPHNVLTNLSFPSVRAKEAALKCGILVPLASSNGREGCGYVFSSSVVHNFLVALHLVLAQ
EIKDKRLTKHLWVVSKAKKFPYSWDLVPRFLTGLLFLRGDLSSSFFREEGEMDIEKMISK
KRRSLFKYIRKLEIVNLSPDRLMEVVHCIHETEEPSLLQHLALRVRPALSFLGFPFAPPD
VHILLSVLRKSTKEFALDLRGSSVSAEGLRNLVCLRNVTSYRASLGEAVQLWEHLWETTG
GEQLRSAMEKFTINPFKAQTVKDVHNLSALMHMQEKMSHSKAGPSGCNTREIPAVADLRH
LEFALGPTCGLEGFKKLVEILGAFPALQHLDLDSQKENEIGDEGVAALSDILPRLCSLET
LNLSQNKITNVGVEKLAGALPSLPSLKTLSVYNNSIGDAGAENFAKALPELASLRELNIQ
FNKITAAGAQSLTDSLRKCPHMQSMALWNPTIPHGVLEHLQQLDSRIRSL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttccaggagatcttgccgggagttagagaggtcctcgccaacgcttcggcc
gtccaaattcaggtgctgctgaacctcatggcagagtcagggaccatctcccaggaatac
caccagactttgctccatgagaaagacagggaggatctagctaggaagatttgtctgacc
ctggtgggaaggcaagacgtccatcaggactcctttgcttctcactccagtttgcagttc
tgtggcgacaaccacggagatgcttcaaccgggactggaagcttgggtgacagcacaatg
agctcaggaatccagccggcgaaagggtacctggacttactgcacagtgacacggacccc
ctgattctgttcaaaagcatcgaggaggaccatccctcagaccatgctcccgatgctact
cttgatgaccaggacaacaacccagatgtcttttacactgtggaaagcaatgacagcggg
gaagaggtttgcctgcgttccagtaccagagaagcctacgagaaaattgctaaactagtg
gaatatgtgctcgaagaagaacctgcagaagacctttttgcaggaagcctcgattcagat
gatgcaacgagcgaaggttgttcagagccaaagaaacaatgtctctgctccggaagttcc
agcctggcggcatcccccatggacacgtctcccgctgaggccgtctctctttccagcgtc
cacgtgcagttttccttgaccaccatagcccctgctgggagacttccaaagatgttcagg
cctcctgacccggtttttgatacaatgatcctcacctttctgccgccttctccagtggtg
aatttgccacttggacccgctgtgttggacattaacatctgtccagctgaagatgcaatt
tataaagcgcctcaaatccgacctcttccttctgagaaagctttcaaaagaccagatatc
gtggacaccttttccatgcggttgaaaacctccttcggggagaggtgccgattcgtgccc
tcagagcaggacgctcccgtggactccctgtacgtcgaatgtgacatggtgcgacgtcac
atcgaaaaccgaagtgggaggaacgcagacctaaggatctgcgacctcgaggagaaggag
atgaccacggtggagagtctgttccagatgcttgagaagcatgaacttgggagcaacaaa
gtgttcctcgtcttggggaaggccgggatgggcaaaagcctcctggctcagaagatctgt
ctggactggtcccatggcaagtttgcccagttcaaatttgtcttccagtttgactgccgg
cagctgagcctcctccatgggaagcactacagcctgcgacagctgctgtttgaattctct
gtcggttctcaaaacagagcggacaacgatgtctaccgatatctgttgcggaacccagac
gaggtcctcctgatctttgatggctttgaagagctgcaggatctggagggttcctctccg
tgtttggacagcctgccccgtaaagagccccggggcaccagcgcgatcttagccggcctc
ttccagaaaaaggtgctcaacggttgcgtcatgttgctcacgtcccggcccaaagagaag
ctgcaccagtatctacccagggtggacaagtgcatggagctgatgggattctccttgcca
caagccgaagcctacctggccaggtactttgaaggatcctcctactgcagggatgccgcg
aacctcatcaaaagctctccttatctttttagctactgttacaatcctgacttgtgtagg
attgtttgctttgtgtgcaaatctgccttggaaagtgggggtggcgaggtcccttccagc
ctcaccggcctgctggtcagattcttccttcaaaaacttgggccctcaacaaacgaagca
acatccccagaacaccagaacatctccacgttagcccaggttgcctggtctcttgggcaa
gatccgcataacgtcctgacaaacctttcgttcccgtccgtcagagccaaggaagcagct
ttgaaatgcgggatattggtgcctttggcatcaagcaacggcagggaaggatgcggttat
gtcttttccagctctgtggtccacaatttcttggtcgccctacatttggttctcgcccaa
gagattaaggacaaaagactcaccaagcacctttgggtagtgtctaaggcaaagaagttt
ccatattcgtgggacctggtgcctcgtttcttgaccggcctgctgttcctccggggggac
ctcagctcttccttcttcagagaagagggggagatggacatagagaaaatgatctccaag
aagcggaggagcctcttcaaatatatccggaagcttgagatagtcaacctcagcccagac
aggctgatggaggttgtccactgcatccatgagacagaagagccatctcttctgcagcat
ttggcgctgagggtcagaccggccctctctttcctcggcttcccctttgcgcctcctgat
gtccacattctgctttctgtcttgagaaaatccaccaaggagtttgctttggacttgaga
gggagctccgtcagtgcggaaggtctcaggaacctggtctgcctccggaatgtcacctcg
tacagagcgtcacttggggaagctgtccagctctgggaacacttgtgggaaacgacggga
ggagagcaactgcggtcggccatggagaaattcaccatcaaccctttcaaagcccagacg
gtgaaggacgtgcacaacctctctgctcttatgcacatgcaggagaaaatgagccacagc
aaggcgggcccctccggttgcaacaccagagagattccggcagtcgcagatcttcgacac
ctagaatttgcgctgggacccacctgtggcctggaagggttcaaaaagttggtggagatt
ctgggtgcgtttccagctctccagcatttggacttggattcccaaaaggagaacgaaatt
ggagacgaaggagtggccgccctcagcgacattcttcctcgcttatgctctctggaaact
ctgaacttgtcacagaacaagataactaacgtgggagtggagaagctcgccggagctctg
ccttccctgccttcgctgaagaccctgagtgtgtacaataacagcatcggtgacgctgga
gcagaaaactttgcaaaagcgctcccagaactggcctctttaagggagctaaacatccag
ttcaacaagataactgcggccggagcccaaagtctgaccgacagcctgaggaaatgcccc
cacatgcagagcatggcactctggaatcccacgatccctcacggcgttctcgagcacctt
cagcagctggattctcgaatcaggtcactgtag
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integrated database retrieval system
