Sphaerodactylus townsendi (Townsend's least gecko): 125431419
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Entry
125431419 CDS
T08213
Symbol
SMG1
Name
(RefSeq) serine/threonine-protein kinase SMG1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125431419 (SMG1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stow01001
]
125431419 (SMG1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125431419 (SMG1)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125431419 (SMG1)
Protein kinases [BR:
stow01001
]
Serine/threonine kinases: Other
PIKK family [OT]
125431419 (SMG1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125431419 (SMG1)
mRNA cycle factors
Common to processing body (P body) and stress granule
125431419 (SMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
SMG1_N
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
125431419
NCBI-ProteinID:
XP_048350142
LinkDB
All DBs
Position
LG04:complement(155877988..155946301)
Genome browser
AA seq
3060 aa
AA seq
DB search
MSRRGPGSRLSGSSSSSGARQHYPPRGWNDWQPRTDSASTDQENLKYSSSRDRSSSSSYG
LQPSNSAAVSRHRHDDIRVPADVQNEEKGGYSVNGGSGENTYGRKSLGQELRVNNVNNPD
FTTVQHGNRALGAKDMRKTQERSLSYSDESRLSNLLRRITREDDRDRRLATVKQLKEFIQ
QPENKLVLVKQLDNILTAIHDVLNESSKLLQELRQEGACCLGLLCASLSYEAEKIFKWIF
SKFSSSTKDEVKLLYLCAMYKALETVGEKKAFSSIMQLVMTSLQSILENVDTPELLCKCV
KCILLVSRCYPHIFSTNFRDTVDILVGWHIDHTQKPSLTQQVSGWLQSLEPFWVADLAFS
TTLLGQFLEDMEAYAEDLSHVASGESVDEDIPPPSVSLPKLAALLRVFSTVVRSIGERFS
PIRGPPITEAYVTDVLYRVMRCVTAANQVFFSEAVLTAANECVSVLLGSLDPSMNVHCEM
VITYGLDQLENCQACGTDYIISVLNLLMLIVEQINTKLPSSFIEKLFIPESKLLVLRYHK
EKEVVAAAHAVYQAVLSLKNIPVLETAYKLILGEMACALNSLLCSLQLPEACSEIQHDAF
KSHVFDVANAKFVVIFDLSALTTIGNAKNSLIGMWALSPTVFALLSKNLMIAHGDIAVYF
PAVQFAVLYTLYSHCTRHEHFISSSLSSSSPSLFDGAVISTVTTATKKHFTIILNLLGLL
LKKDNLTHDTRKLLMTWALEVAVLMKKSETYAPLFSLPSFHKFCKGLLANTLLEDINICL
QACSSLHALSPSLPDDLLQRCVDVCRVQLFHSSARIRQAFGKLLKSIPLDVVLSNNHHTE
IQEISLAIRSHMSKAPSSTFHPQDFSDIISFILYGSSHRTGKESWLERLFYSCQRLDKRE
QSSIPRNLLKTEAVLWQWAVWEAAQFTVLSKLRTPLGRAQDTFQTIEGIIRSLAAHTLNP
DQDVSQWTTADNDEGHSSNQLRLVLLLQYLENLEKLMYNAYEGCANALTSPPKVIRTFFY
TNRQTCQDWLTRIRLSIMRVGLLAGQPAVTVRHGFDLLTEMKTNNVSQGNELEVTIMMVV
EALCELHCPEAIQGIAVWSAAVVGRSLTWISSVALQAEGRFEKAAVEYQEHLCAMTGVDC
CVTGFDKSVLKLANSNSGNNASPKHSLNGDLRKTVLAKPSDSSPEVINYLGNKACECYVS
IADWSAVQEWQNAVHELKKNSSGASVALKVDFNYIKSLSSFGIGELGECTEQLELLPGED
INLLIGGAKEKIDMKKLLPNMLSPDPRELQKALEVQLLRSSVCLATAVNHMEQEQKWQPI
TENLVKYLKQTSRIAIGPLKLATLTVSQSLPVLSTLQLYCSSALENTVSNRLSSEDCLIP
LFNEALRSCKQHDVRPWMHALRYTMYQNQLLAKLKEQAVPVRSHLMELDLTAAKFARKRG
NVALATRLLAQCSEVQLGKTTTAQDLVQHFKKLSAPIQMDEKWGPELEIEKTKLLYTAGQ
STHAMEMLSSCAICFCKSAKAEYAVAKSILTLAKWIQAEWKEISGQLKQVYRARQQQNLA
GLSTLSKNIYTLIDLPSVNTTEEDYPRIESESTVNIGVGEPDFILGQLYHLSSAQAPEIA
KSWAALASWAYRWGRKVVDNASQGGVCLLPREKSEVQNLLPENVTEEDREKIYSILGQAV
CRPAGIQDEDMTLQIAENEDNEEDDMVDVIWRQLLSSCPWLSDLDENSTEGLIKVWRKVV
DRIFSLYKLSCSAYFTFLKLNAGQVLLDEDDPRLHLRNTSEQSTDDVIVMATLRLLRLLV
KHAGELRQYLEHGLETTPTAPWRGIIPQLFSRLNHPEVYVRQSICNLLCRVAQDSPHLIL
YPAIVGTISLSSESQASGSKFPSAIPTFLGNIQGDELLAGECDGGSPPASQESLKDEPKT
GLNEDQAMMQDCYSKIVEKLSTANPTMVLQVQMLVAELRRVTVLWDELWLGVLLQQHMYV
LRRIQQLEDEVKRVQNNNTLRKEEKMAIMREKHTALMKPIVFALEHVRSITAAPAETPHE
KWFQDNYGDAIENALEKLKNPSNPAKPGSSWIPFKEVMLNLQQRAQKRASYILRLEEISP
WLAAMTNTEIALPGEVSARDTVTIHSVGSTITILPTKTKPKKLLFLGSDGKNYPYLFKGL
EDLHLDERIMQFLSIVNTMFATINRQETPHFHARHYSVTPLGTRSGLIQWVDGATPLFGL
YKRWQQREASLQAQKAQDSYQTPQNPGIVPRPSELYYSKIGPALKAVGLSLDVSRRDWPL
NVMKSVLEELMETTPPNLLAKELWSSCTTPDEWWRVTQSYARSTAVMSMVGYIIGLGDRH
LDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTQNIETAFGVTGVEGVFRLSCE
QVLHIMRRGRETLLTLLEAFVYDPLVDWTAGGEAGFAGAVYGGGGQQAENKQSKREMERD
ITRSLFSSRVAEIKVNWFKNRDEMLSVLPKLDGSLGEYLNLQEQLTEVEKLQGKLSEEID
YLEGAEGVDHLSHTLQHRYSEHTQLQTQQRAVQEAIQVKLNEFEQWTSHYQAAFNNLEAT
QLASLLQEISTQMDLGPPSYVPATAFLQNAGQAHLISQCEQLEGEVGAFLQQRRSVLRGC
LEQLHNYATVALQYPKTVFQKHRVEQWKTWMEELIVNMTIECSQDLYRKYEIQYAPQPPP
AVAQFITTTEMTLQRYAADINTRLIRQVERLKQEAVTVPVCEEQLKEIERCIKVFLHENG
DEGSLSLASVILTALCTLTRRNLMMEGAASSAGEQLVDLTSRDGAWFLEELCSMSGNVTC
LVQLLKQCHLVPQDLDIPNPVEASEAIHLANGVYISLQELNSNFRQIIFPEALRCLMKGE
HTLESMLNELDGLIEQTTDVPLQTLVESLQAYLRNAAMGLEEETHAHYIDVARMLHAQYG
ELIQPRNGSVDETPKMSAGQMLLVAFDGMFAQVETAFGLLVEKLNKMEIPVAWRKVDIIR
EARSTQANFFDDDNNRQVLEEIFFLKRLQTIKEFFRLCSTFSRTLSEQGKRIVETIIKCY
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagaggcccgggatctcggctgagcggctcctcgtcgtcgtccggcgccagg
cagcactaccccccgcggggctggaatgactggcagcccagaactgatagtgcatcaact
gaccaagagaatttaaaatactcttcatccagagaccggagttcttcctcctcctatgga
ttacaaccctcaaattcagcggcggtgtctcgacatagacatgatgatatccgagtcccc
gctgatgtacagaatgaagaaaagggtggctacagcgtcaatggaggatctggggaaaat
acttatggtcggaagtcgttggggcaagagctgagagttaacaatgtgaacaatcctgat
tttaccactgttcagcatgggaatcgtgctttaggcgcaaaagacatgaggaaaacacaa
gagcgatcattgtcttactctgatgagtctcgactgtcaaatcttcttcggaggattact
cgggaagacgacagagatcgaagactggctactgtaaagcaactgaaagaattcattcag
cagccagagaacaaactggtgctagttaaacagctggataatatcttgactgccatacat
gatgtgcttaacgaaagtagcaaattgcttcaagagctgagacaggagggcgcttgctgt
ctcggcctgctttgtgcttctctgagctacgaagctgagaagatctttaaatggattttt
agcaaattcagctcatccactaaagacgaagttaaactcctttatttgtgcgcaatgtac
aaagcgctggagaccgtgggagagaagaaagccttttcatccatcatgcaacttgtgatg
actagcttgcaatctatcctggagaacgtggatactccagaactgctgtgtaaatgtgtc
aagtgcatccttctcgtgtcccgatgttacccccacattttcagcaccaactttcgggac
actgttgacatcctggttgggtggcatatcgatcacactcagaaaccttctttgacccag
caggtctctggatggttacagagcctggagcctttttgggtagctgatctcgcattttct
accacgcttttgggtcagttcctagaagatatggaagcgtatgctgaggatctcagccac
gtggcgtctggcgaatccgtcgatgaagatataccacctccttctgtttcgctgcccaaa
ctggcggcactgcttcgggttttcagtacggtggtgaggagcatcggggagcgtttcagt
cccatcagagggccaccaattactgaagcttatgtcactgatgttctgtacagagtcatg
aggtgcgtgactgccgccaaccaggtcttcttttcggaggctgtcttgaccgctgccaac
gagtgtgtcagtgtcttgctgggcagtttggatcccagtatgaatgtacactgtgaaatg
gtcatcacttatgggctggatcagctggagaattgtcaggcttgcggtactgattatatc
atctcggtgttgaacttattaatgctgattgttgaacaaataaatacaaaacttccatcg
tcgtttatagagaagctatttataccagagtctaaattgcttgtgctccgctaccacaag
gaaaaagaggttgttgcggcggcgcacgctgtctatcaagcagtattgagcctcaagaac
attcctgttctggagacagcctacaagctgatcctgggggaaatggcgtgcgccttgaac
agcctcctgtgcagcttgcaacttccggaagcttgttccgaaatccagcacgacgctttc
aagagccacgtgtttgacgtggcgaatgccaagtttgtggtgatatttgacctgagtgcc
ctcaccacgattggaaatgcaaagaactcgttgattggcatgtgggctttatctccaacg
gtgtttgcgttgctgagcaaaaacctgatgattgcgcacggcgacattgcggtttacttc
cctgccgtccagtttgctgtgctctacacactgtattcacattgcactaggcacgagcac
ttcatctctagcagcctgagctcctcttccccttccttgttcgacggggctgtcatcagc
acggtaactacggccaccaagaaacattttacgatcatactgaacctcttgggactcctg
cttaagaaggacaaccttacacacgataccaggaaactgctaatgacttgggcgttggaa
gtggctgtcctcatgaagaaatccgagacgtacgccccgttgttctcgctcccatccttt
cacaagttctgcaaaggacttctagcaaacaccctcctagaagatataaacatttgcctt
caggcatgcagcagccttcacgctttatcaccgtctctgcctgatgacctgttgcagaga
tgtgtcgacgtgtgccgcgtccagctctttcacagcagcgctcgaataaggcaagcgttt
gggaaactgttgaaatctattcctttggacgtagtgttaagtaacaaccatcacacagaa
atacaagagatctctttggcgatccggagtcacatgagcaaggctccgagcagcacgttt
cacccgcaggacttttctgacatcattagcttcatcttgtacgggagctctcacagaaca
gggaaggagagctggctggaaaggttattttacagctgccaaaggttagataaacgagaa
caatcaagtattccacgcaatttgttgaaaacagaagctgttctttggcagtgggctgtc
tgggaagccgcgcaatttactgtcctgtcaaaactgaggaccccgcttggtagggcccag
gacactttccaaacaattgaaggcatcattcgaagtcttgcggcccacactttgaaccct
gaccaagatgtcagccagtggactacagctgacaacgacgaaggccacagtagcaaccag
ctgagacttgtgttgcttctgcagtacttggaaaacttggagaagctgatgtacaatgct
tacgaaggatgtgccaatgcgctgacttctccgcccaaggtcatcagaacgtttttctac
actaaccgccagacttgccaagattggttaactcgaattcgactgtctatcatgcgggtt
ggattgttggcgggacagccggctgtgaccgtccggcatggtttcgatttactgacggaa
atgaagaccaacaacgtttcccagggaaatgaactggaagtgaccatcatgatggtggta
gaagccctttgtgaactccattgccctgaggccatccaaggaattgcggtgtggtcagcc
gccgttgtcgggaggagtcttacctggatcagttctgtggctctgcaagcggaaggacgg
tttgaaaaagctgccgtcgagtaccaagagcacctgtgtgccatgaccggggtggattgc
tgtgttacaggtttcgataaatctgtcctgaagctggccaattcaaacagcggtaataat
gctagccccaagcactctctgaatggggatttgcggaaaacagtgctggctaagccaagc
gactcttcccccgaagtcatcaactacctgggcaacaaggcctgcgagtgctacgtttcc
attgctgactggtccgccgtgcaagaatggcagaacgccgtccacgaactgaagaagaac
tcgagcggcgcctcggtcgccttaaaagtcgacttcaactacatcaaatctctaagcagc
tttggcattggagagcttggagaatgtactgaacagctggaattgcttccgggggaagac
atcaatctacttattggaggagccaaggaaaaaatagatatgaagaagcttcttcctaac
atgctgtctcctgatccaagagaactccagaaagctcttgaggttcagttactgagaagc
tcggtctgtcttgcaacagcagttaaccacatggaacaggagcagaagtggcagccaatt
acggagaatcttgtcaagtacctgaagcaaacgtcacggattgctattggacccttaaag
cttgccaccttgacagtgtctcagtctttgccggtactgagcaccttgcagctctactgt
tcgtctgctttggaaaacactgtgtcgaatcggctttcctcagaggattgcctcattcct
ctcttcaatgaagcgctgcggtcatgcaagcagcacgacgtaagaccgtggatgcatgcc
cttagatatacaatgtaccagaatcagttgctggcaaaactgaaagagcaagcggttcca
gtgcgaagccatttgatggagctggacctgaccgctgccaagtttgcgcggaagcggggc
aacgtggctctggcaacccgcttgctggctcagtgcagtgaagttcagcttgggaagacc
acgacggcccaagacttagtccagcacttcaagaaactctctgcccccattcagatggat
gagaaatggggccctgaactcgaaattgaaaaaactaaactgttgtatacagcaggtcag
tccacccacgccatggagatgctgagctcctgcgccatctgcttctgcaagtctgccaaa
gcggaatacgcggtggccaagtccatcctgacgctcgccaagtggatccaagccgagtgg
aaagagatctcggggcagctgaagcaggtctaccgggcacggcagcagcaaaacctggcc
ggcctctcgacgttatccaaaaacatctacactttgattgacctgccgtctgtcaacacc
accgaagaggactatcccagaattgaaagtgaatccacagtgaatatcggtgttggagaa
ccagacttcatcttggggcagctctaccacctgtcttcagcacaagctcccgaaatcgcc
aaatcctgggcagccctcgccagctgggcttacagatggggccgaaaggtcgttgataac
gccagccagggaggtgtctgccttctgccgagagagaaatccgaagttcagaacctgctc
ccagaaaacgttacggaagaagacagagagaaaatctatagcattctcgggcaggcagtg
tgtcggccagctgggattcaggatgaagacatgacccttcagattgcagagaacgaagac
aacgaggaagacgacatggtggatgtgatctggcgccagctgctgtcgagttgcccctgg
ctttcggacctggacgagaattcgaccgaggggctgatcaaagtgtggaggaaagtggtg
gaccgcatcttcagtctttataaactctcgtgcagcgcatattttactttcctgaagctc
aacgccgggcaggttctgctggacgaggacgaccccaggctgcatctcagaaacacttct
gagcagagcactgatgacgtgatcgtcatggccaccttgaggctgctgcggctgctcgtg
aagcacgctggggagctgaggcagtacctggaacacgggcttgaaaccacccccacagcc
ccatggcgaggcatcattcctcaactcttctcccgcctgaaccaccccgaagtctacgtc
cggcagagcatttgtaacctcctttgccgagtagcgcaagattctccgcaccttatcttg
taccctgcaattgtaggcaccatatcgctcagcagcgagtcccaggcttcagggagcaaa
ttcccttccgcgatcccgacctttttgggaaacatccaaggggacgaactgctggccggc
gagtgtgacggaggaagcccccccgcttctcaggagagcctaaaagatgagccgaaaacg
ggcttgaacgaagaccaggccatgatgcaagactgctacagcaaaatcgttgagaagctg
tcgaccgccaatccgacaatggtgttgcaggtccagatgctcgtggccgagttgcgcaga
gtcaccgtcctttgggacgaactgtggctgggcgtcctactgcagcagcacatgtacgtc
ctgcggcggatccagcagctggaagacgaggtgaagagagtccagaacaacaacaccctg
cgaaaagaggaaaaaatggccatcatgcgcgagaaacacacagccctgatgaaacccatt
gtctttgccctggagcatgtgcggagcatcaccgcggctcctgcggaaactcctcatgag
aagtggttccaagacaactacggcgatgccattgaaaacgctctggagaaactgaagaac
ccgtcgaacccggctaagccggggagcagctggatcccttttaaagaggtcatgctcaac
cttcagcagagagcccagaagcgggccagttacatcctgcgtctcgaggagatcagcccg
tggctggctgccatgaccaacaccgagatcgccctccccggagaggtgtctgcccgagac
acagtcacgatccacagcgtggggagcaccatcacaatcctgcccacgaaaaccaaaccc
aagaagctcctgttcctgggctcggatgggaagaactacccgtaccttttcaaaggtttg
gaagacttgcatctcgacgaacggatcatgcagttcctgtccattgtcaacacgatgttt
gccaccatcaatcgccaagagacgccccatttccacgcgaggcactactcggtgacaccg
ctgggaacccgatcgggcctgattcagtgggttgacggagccaccccgttatttggtctg
tataagaggtggcagcagagagaagcctctttgcaagcacagaaggctcaagattcctac
cagacgcctcagaatcctggaattgtcccaagacccagtgaactgtactacagtaaaata
gggcccgcattgaaagccgttggacttagcttggatgtgtctcgccgagactggccgctg
aatgtcatgaagtctgtcctggaagagttaatggaaaccacgccgcccaatcttctagct
aaagaactttggtcatcctgtactacccctgatgaatggtggagagttacacagtcttat
gcaaggtccacagcagtaatgtctatggttggctacatcatcggtctcggagacagacat
ctggataacgtcctgatcgatatgaccactggagaggtcgttcacatagattataacgtt
tgctttgaaaaagggaaaagccttcgcgtcccagagaaagttccgtttcggatgacccag
aacattgagacggcgtttggggtgactggagttgaaggggtgttcaggctttcctgcgaa
caggtgctgcacattatgcgacgcggccgagagaccctgctgacgttgctggaggctttt
gtttacgacccgctcgtggactggaccgccggaggggaagccgggtttgctggagccgtg
tacggcggaggggggcagcaggctgagaacaagcagagcaagagagagatggaaagagac
atcacgcgcagcctcttctcttccagggtagccgaaatcaaggtcaactggtttaagaac
agagatgaaatgctgtctgtccttccgaagctggatggcagcttgggagaatatttgaac
ctgcaagagcaattaacagaggttgaaaaactgcaaggcaaactctcggaagaaattgac
tacctggagggagcagaaggggtggatcacctgtctcacacgctgcagcacaggtattct
gaacacactcagctgcagactcagcaaagagccgtgcaggaagccatccaggtgaagctg
aacgaatttgagcagtggacctctcactaccaagcggcgttcaacaacctggaagcgacg
cagcttgccagtctcctccaggaaatcagcacccaaatggacctcggcccaccgagctac
gtgcctgcaaccgccttcctccagaatgccggccaagcgcacttgatcagtcagtgtgag
cagctagagggagaagtcggggcttttcttcagcagaggcgctctgtgctgcgcgggtgc
ctcgagcagctgcacaactacgcaacggtcgctctccagtaccccaagacggtgtttcag
aagcaccgtgtggagcagtggaagacctggatggaggaactcattgttaacatgacgatt
gaatgcagtcaggatctttacaggaagtatgaaattcagtacgctcctcagcccccaccg
gccgtcgcccagtttatcaccacgaccgaaatgacactgcagcggtatgccgctgacata
aacaccagactgatcaggcaggtggagcgcttgaagcaagaggcggtcacggttcccgtc
tgcgaggagcagctgaaagaaatcgagcgctgcattaaggtctttctccatgaaaatgga
gacgagggctctctgagcttagcgagcgtcatccttactgctctgtgtactcttaccagg
cgtaatctcatgatggaaggcgcagcgtcgagtgctggggaacagctggtggatctgact
tccagggacggagcctggttcctggaggagctgtgcagcatgagcgggaacgtgacgtgc
ctggtgcagctgctgaaacagtgccacctggtcccccaggacttagatatccccaatccc
gtcgaagcgtcggaagccattcacctggcaaacggagtttacatctctcttcaggagttg
aattccaatttccgccagatcatcttccccgaggctctgcggtgcttaatgaagggcgag
cacaccttggagagcatgctgaacgaactggacggcctcattgagcaaacgaccgacgtc
cctttgcaaacgctggtggagtctcttcaggcatacttgagaaacgcggccatggggctc
gaagaagaaacccacgctcattacattgatgtggcgaggatgcttcacgcccagtacggt
gaactgattcagccgaggaacggctcggtggatgaaacccccaaaatgtcagcggggcag
atgctgttggtagccttcgacgggatgtttgcccaagtggagaccgcgtttgggctgttg
gttgaaaagctcaacaagatggaaatccccgtggcctggcgcaaggtcgacattatcagg
gaagcccgcagcacgcaggccaactttttcgacgacgacaacaatcggcaggtcttggaa
gagattttcttcttgaaacggttgcagacgattaaggaatttttcaggctttgcagtact
ttttcccggacgctttcagagcaagggaaacgcattgtagagaccattattaaatgctac
taa
DBGET
integrated database retrieval system
