Sphaerodactylus townsendi (Townsend's least gecko): 125431490
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Entry
125431490 CDS
T08213
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stow01002
]
125431490 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125431490 (USP42)
Enzymes [BR:
stow01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125431490 (USP42)
Peptidases and inhibitors [BR:
stow01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125431490 (USP42)
Ubiquitin system [BR:
stow04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125431490 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125431490
NCBI-ProteinID:
XP_048350292
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All DBs
Position
LG04:complement(157438815..157467359)
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AA seq
1374 aa
AA seq
DB search
MTIVDKVSESSNPSACQKQPFSSLVLASGDMDAGSPGWSTASSLEAPKHKISLGPVPGAA
VYSNSSVPEKSKPSTQKESSLGDGIAPPQKVLFPAEKVCLKWQKTHRVGAGLQNLGNTCF
LNSALQCLTYTAPLANYMLSHEHSKTCHEQGFCMMCTMQSHITQAFSNSGTIIKPMAVIN
DLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSNKLDRHSQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPYLDIPLEIKTAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFSCHAGHYYCYIKASNGQWYQMNDSIVSNSDIRSVLNQQAYVLFYIRSHDVKNGNEH
MHSAHTPGQSSPRPVINQRVVNNKQTTPGFIGPQLPPHMMKNSNHVNGTGPLKETPSSSV
ASPSSVPLNRPSSTPQASTIPNWTINRPPTATNPDPSKKKITISINKLSARQTASHNTCP
AENLGKPAPSSTVSNPSAVQSTSSASAVSAASRIPKPPPPPGETCPTPVANGKPKLNPST
LVPYGAESSEDSDEEPKGPVLENGHANPFNGVLSGSAAISPESSCTSCRGADEEAALLHK
PPKNVAVNGAIGVDEAPKENGLPPEDAACPAKPVKPAENPFSKANGLHGKGPPTALPPVP
EDRVLDSFRYNQLKTPPEEISASGAEKTSEEDGCLEASGSVSKRIPCDTAVQILTNLLGS
IKELPAPSNPSPASTKDEPCENVAVEMPNSHLDSSGQYEPQSNSLEAEAEFPLEGDLEDH
AAKTKGPKEEKDAWKKSPVHFRETPEGAEKLAQSPFRKSDAESRPLKVVTLNGVEKSQET
QNGVKNVADPALPEESSSTRLDAGNQSLKEEDGPRGGSEGLREQAEQQQEQQPRSQSKEK
VFASKKPDREHYRSKRDRSESEEREASRSQIDGHFHKKRCSHSRERTKQEYSRREYYNGS
KYRFPSSLEPGRGSGKYSHSTSHSRGKMDPERSRYCPWKGEPLWSRTSYHQDIPRKWEKY
RPDNYYYPSHVARSSQDRKFCHDERDYNKSSHMYNKPYKDYSYKSRWTYDPAEKERERYH
DSSSKADVYRYPIPAQHLEKYPHGREAPLTEEHYLHPAAEHLKDRKRKCPSPEGSNSNPE
KKRRRSSLSEPLEEPKSKKRKKSKKKKKSKDKHRERDCRHHQDSDPSASSSEAEAHRHKK
KKKKKKKRAKRSESCEEPLVPHLPKPASAEAGALKTWEADKALSKACRKRGGQPQDGVAE
AYWKSKCIEGSAGEGCVFTTDQVAATEAPFHKDCSWTVSRSSNNDFPYEEEIRW
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtgtctgagtcctccaacccttctgcctgtcagaagcagcct
ttcagctccctggtgctggcttctggagatatggacgcaggctctccggggtggagcact
gcgtcttctctagaagctccgaaacacaagatctccttgggaccagtgccgggagctgcc
gtttattccaattcatccgttcctgaaaagtccaagccctccactcagaaagagtcgtct
ctcggcgatggcatcgcacccccgcagaaagtcctcttcccggcggagaaggtgtgcctg
aaatggcagaaaacgcaccgagtcggagccggcctccagaacctcggcaacacatgtttc
ctcaattccgctctgcagtgtctgacctacacggcccctctggccaactacatgctgtcc
catgaacactccaaaacctgtcacgagcaggggttctgcatgatgtgcaccatgcagtct
catatcacccaagccttctccaactctggcaccatcatcaagccaatggccgtcatcaac
gacctcagacggatagcaaaacatttccgtttcggaaatcaggaagacgcacacgaattc
cttcgctacactgttgacgctatgcagaaagcatgtctgaacggaagcaacaagttggac
agacactcacaagccactacgctcatttatcaaatatttggaggatacctgcgatctaga
gtaaagtgcatgaattgcaaaggagtttctgatacttttgatccctacctggatattcca
ctggagataaagacagctcaaagtgttaacaaagctctggagcagtttgtcaaaccagaa
caactagatggtgaaaatgcttataaatgtagcaagtgtaaaaagatggttcctgcctca
aagagattcacaatccatcggtcgtcgaacgttctcaccctgtcccttaaacgatttgca
aatttcagcggtgggaaaattacaaaggaagtgaaatatcctgaatatttggacatccgc
ccatacatgtcccagccaaacggagagccaattatttatgtgttatacgctgtcctggtc
cacactggcttcagctgccatgccggtcattactactgctacatcaaggccagtaacggg
cagtggtaccagatgaacgattccattgtctccaacagcgacatccgatctgttctgaac
cagcaagcgtatgttcttttttatatcaggtcccacgatgtgaagaacggcaacgaacac
atgcattccgctcacacccccgggcagtcttcgccccgaccggtgatcaaccagcgggtg
gtgaataacaagcaaacaacgccgggtttcattgggcctcagctcccgccacacatgatg
aagaattcgaaccacgtgaacggaactggaccgctgaaggaaacgcccagcagttctgtg
gcgagccctagcagcgtgcccctcaacaggccgtcttccactccccaagccagcaccatc
ccaaactggacgataaacaggccgccaacggcgaccaaccccgacccttcgaaaaagaaa
ataaccatcagtattaacaagctgtccgctcgccaaaccgcctctcacaacacctgcccc
gcggagaacctcggcaagccggccccttcttcgaccgtttccaacccttccgcggtgcag
tctacctcaagcgcgtccgccgtctcggctgctagcagaatccccaagccgccgccgcct
cccggcgaaacgtgtcccacaccggtggcgaacggcaagcccaagctgaacccgagcacg
ctggtcccgtacggggctgaatcgtcggaagactcggacgaggagccaaaggggccggtg
ttggagaacggccacgccaaccctttcaatggggtcctgtcgggaagtgcggccatttcg
ccagagagctcctgcacgtcctgccgcggtgcggacgaggaggcggcactgctgcacaag
ccgcccaaaaatgttgctgtcaatggtgctattggtgtcgacgaggctccgaaagaaaat
gggctcccccccgaggacgctgcttgtccagccaagccggtgaaacctgcagaaaacccg
ttctcgaaagccaacggattgcacgggaaaggaccacctactgctttgcccccggttccc
gaagacagggtcttggactccttcagatacaatcaactaaaaacgccaccagaagaaata
agcgcaagcggagcagagaaaacctctgaagaggacggctgtttggaagcctcgggcagc
gtcagtaagagaatcccctgtgacacggcggtccagatcctcaccaatcttcttggcagc
atcaaggaactcccggctccttccaaccccagccccgcttctaccaaagatgaaccctgt
gaaaacgttgctgtggaaatgccaaattcgcatctggacagcagtgggcagtatgagcct
cagtcgaactcccttgaagccgaagcagaattccctctagaaggcgacctggaggatcac
gcagcaaaaacaaaaggaccaaaagaagagaaagacgcttggaaaaagagtcccgtgcac
ttccgagagacacccgagggtgcagaaaaactggcccagagcccttttagaaagtctgac
gctgaaagccgacctctcaaggttgtcactctgaacggggtagagaaaagccaagaaaca
cagaacggcgtgaagaacgtcgcggatcctgcactccctgaggagtcttcctccacaagg
cttgacgcagggaaccaaagtttgaaagaggaggacgggccaagaggggggagcgaaggt
ctcagagaacaggcagaacagcagcaggagcaacagccccgttcacagtcaaaggagaaa
gttttcgcctccaaaaaacccgacagggagcactaccgcagcaaacgagaccgctcggaa
agcgaagagcgggaggccagccgcagccagatcgatgggcacttccacaagaaaaggtgt
tcccacagcagagaacgaacgaagcaggagtattcgcgaagggaatactacaacggaagc
aagtaccggttcccctcgagccttgaaccggggcgaggttcagggaagtactcccattcc
acgtcccacagcagagggaaaatggatcccgaaaggagtcgctattgcccctggaaaggt
gagccattatggagcaggacgagttatcaccaggatatcccaaggaagtgggaaaaatac
cggcccgacaactactattacccttcccatgtagcaaggagtagccaggatagaaaattc
tgtcacgacgagagggactataacaaatcaagtcacatgtacaacaaaccatacaaagat
tattcgtacaaaagccgatggacttacgacccagcagagaaggaaagagagaggtaccac
gacagcagttcgaaagcagatgtgtaccgctacccaattcccgcccagcacctggagaaa
tatccccacgggagagaggcgcccctgaccgaggaacactatttgcatccagccgctgaa
cacttgaaggacaggaagagaaagtgccccagcccggagggcagcaacagcaaccctgaa
aagaaacgccggaggagctcgctgagcgaacctctcgaggagccgaaaagcaaaaagcgc
aagaagtcgaagaagaagaaaaagtcaaaggataaacaccgagagagagattgcaggcac
caccaggactcggatccctccgcgtcgagctccgaggcagaggcccacaggcacaagaag
aagaagaagaaaaagaagaagcgcgcaaaaagatccgaaagttgcgaagaacctctagtg
ccccacctccccaagccggcgagcgcggaagccggcgccctcaaaacctgggaggcagac
aaagctttatccaaagcgtgtcgaaaacgtggcggccagccccaagacggagtggccgag
gcctactggaaatcgaagtgcatagaaggcagcgccggggagggctgcgtcttcactaca
gatcaagttgctgctaccgaggcaccttttcataaagactgcagctggacagtctctagg
tcttcaaacaatgactttccatatgaagaagaaatcagatggtga
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