Sphaerodactylus townsendi (Townsend's least gecko): 125431908
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Entry
125431908 CDS
T08213
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stow03009
]
125431908 (DDX10)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125431908 (DDX10)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
90S particles
Helicases
125431908 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Motif
Other DBs
NCBI-GeneID:
125431908
NCBI-ProteinID:
XP_048351056
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All DBs
Position
LG04:26669667..26919639
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AA seq
850 aa
AA seq
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MGKSGGVSAGSVSDPVRNFERWKKKYAQRNNKLKLQRKQKKRPEWEVEREAIARLEQRYS
EINTNEIVRFSDFPLSRKTLKGLQEAQYRMVTEIQRQTIGLALQSKDVLGAAKTGSGKTL
AFIVPALEVLYRQQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLVIGGKDL
KQESERIHNINILICTPGRLLQHMDETSYFHASNLQMLILDEADRILDMGFADTMNAILE
NLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQNYVVCELHQKI
NMLYSFLRSHLNRKSIVFFASCKEVQYLFRMFCRLRPGLPVLALHGKQQQMKRMEVYNDF
VRKKSAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLILLP
SEEKEMLQQLLQKKVPINKIKINPEKIVDIQKKMQSSLAQDQGLKERAQRCFVSYLRSVY
LMKNKDVFDVFKLPVAEYALSLGLAVAPRVRFLQKAQKKMLGSNPEKECLFRGADHSEKE
PPSLSNNEVERCRTLFSETVTLAGEEIQELRSKDNRMEEDSSQGESELEEEPLMCKDLKT
PSVQFFEDDEDDDDTKDVDVLTVKRRNVFGLKPTVALNSSEQSKPKLKKKITKTKEAKKV
LKRKFKVNTKIVFTEEGELIQQWPPAQKKSVENKAEQSDDSGGIDLERAKERLQEEDKFD
KEEYRKKIKEKHREKRLKEKAARREARKRNAKNQEEEVAFLDYSDSDGEFDPSILPDPDQ
NRETDQEDDPESFGGLETGRQRFGGSRTEAAAPKRKKMKLSQEDSFASLDTGLSLAEDEA
LVLELLSGRS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggggaaatccggaggggtctccgcggggtcggtttccgacccggtgcgcaacttcgag
cgctggaagaagaaatacgcgcagcgcaacaacaagctgaagctgcagcgcaagcagaaa
aagcggcctgagtgggaggtggagagggaggcgatcgcccgcctggagcagcgttactcc
gagataaatacaaatgaaatagtaaggttttcagatttccctctatccaggaagacgtta
aaaggtttgcaagaagctcagtatcgcatggtgactgaaatccagcgacagactataggt
ttggcattacaaagtaaagatgtgttaggagctgcaaaaactggttcaggcaaaaccttg
gctttcattgtacccgctctggaagtcttatatcgccagcagtggacttccacggacggg
ttgggagttctgataatatcacccactagagagttggcctatcagacgtttgaggtcctg
cggaaggtgggaaagaatcatgacttttcagcgggactcgtcattggtggaaaggactta
aaacaagaatcagaaagaatccacaatataaatatactgatatgtacgcctggccggctt
ttacagcacatggatgaaacttcatattttcatgcttctaacctgcaaatgttgatactt
gatgaagctgacaggattttggacatgggctttgctgatacgatgaatgcaatcctagaa
aaccttcccaagaaacgccagacgctgcttttctccgccactcaaacaaaatctgtgaag
gacttggcgcgactcagcctcaaagatccggaatacgtctgggtgcatgaaaaggcaaag
ttcagcaccccggcaactttggaacagaactacgttgtttgtgagctgcatcaaaaaatc
aacatgttgtactcctttctgagaagtcatctgaataggaagagtattgtattttttgca
agctgcaaagaggttcagtacctctttcgtatgttctgccgcctccgtcccgggctgcct
gtactggcacttcacggcaagcagcagcagatgaaaagaatggaagtctataatgatttt
gtgcgcaagaaatcagcagttctctttgctacagatattgccgctcgggggctggatttc
cctgcggtgaattgggtcattcaatttgactgtccagaggatgcaaatacatatattcac
agagttggaaggacagccaggtacaaagaaggtggagaagctttgctcatacttctccct
tcagaggaaaaagaaatgcttcagcagctgttgcagaagaaagttcctatcaacaaaatc
aaaatcaaccctgagaagattgtggacatccagaagaagatgcagtcctccttagctcaa
gatcaagggttgaaagagagagctcaaaggtgttttgtttcctatctgcgatccgtctac
ctaatgaagaacaaagacgtattcgacgtattcaagctacctgtggctgaatatgccctc
tccctcggacttgctgtggcccctcgtgtgagatttcttcagaaagcccagaagaaaatg
cttggaagcaaccctgaaaaagaatgtttgttcaggggggcagatcactctgagaaagaa
ccaccttccttaagcaacaacgaagtagagagatgcaggacactcttcagtgaaacagtg
acgttagcaggagaggagatccaagagcttcgcagcaaagacaacagaatggaggaggat
tcatctcaaggagagtctgagttggaagaggaaccactaatgtgcaaggacttgaaaact
ccatctgtgcagttctttgaagatgatgaagacgacgatgacacaaaggatgttgatgtg
ctgaccgtaaaacggcggaacgtctttggcttgaaacccacggtagctttgaactcatca
gaacaatcaaaaccaaaactgaagaagaaaataactaagacaaaagaagctaaaaaagta
ttgaagagaaaatttaaagtaaacacaaaaattgtatttactgaagagggggagctaatt
cagcagtggccgccagcacagaagaagtctgttgaaaataaagcagaacagagtgatgat
tctggagggatcgatctagaacgagcaaaagagagactgcaggaagaggacaaatttgac
aaagaagaatacagaaagaaaattaaagaaaaacacagggaaaagaggttaaaagaaaag
gcagctaggagagaagccaggaagagaaatgcaaagaatcaagaggaagaagtagcgttt
ttggactacagtgacagtgatggcgaatttgatccaagcatccttcccgaccccgaccaa
aacagagagactgaccaagaggatgatcctgaaagctttggtgggcttgaaacaggcaga
caacgttttggtggaagcagaacagaagcagcagcgccaaaaaggaagaagatgaaactt
agccaagaggattcatttgcgtcattagacacaggcctttctctcgcagaagacgaagcg
ctcgtgttggagctgctcagcggtcgcagctaa
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