Sphaerodactylus townsendi (Townsend's least gecko): 125431914
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Entry
125431914 CDS
T08213
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125431914 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125431914 (DDX3X)
03041 Spliceosome [BR:
stow03041
]
125431914 (DDX3X)
03036 Chromosome and associated proteins [BR:
stow03036
]
125431914 (DDX3X)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125431914 (DDX3X)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125431914 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
125431914 (DDX3X)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125431914 (DDX3X)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125431914 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125431914
NCBI-ProteinID:
XP_048351066
LinkDB
All DBs
Position
LG04:complement(73406571..73434177)
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDDQSGGGTASKGRYIPPHLRNREASKQDSPSWDSRG
GNGYMNGYDRDSRMNGYDRDRGVFGSRGGSGRDDRGFDGWNAGRDRDAYSSFGARSDRGS
GKSSFFGDRGNGSRGRFDERGGRGSDFDGIGTRGDRSGFGRFERGGNSRWSDKCDEDDWS
KPLAPSERMEQELFAGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVDMGEIIMGNIEL
TSYTRPTPVQKYAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKEN
GRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSKVRPCVVYGGADIGQQIRDLERGC
HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRQ
TMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNA
TGKDCLGEFQHNSNGSGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREE
ALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
SFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGSSRGRSKGRFFSRGGLVPR
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggctgtggaaaatgccctcggtctagatcagcagtttgctggtctagac
ttgaattcttcagacgatcagagtggaggaggtacagcaagcaaaggccggtatattcct
cctcacttgcggaacagagaagcttcaaaacaggattcccccagctgggactctcgtgga
ggtaatggctatatgaatggatatgatcgtgacagccggatgaatggctacgatcgtgat
cgcggtgtgtttggatccagaggaggatctggacgtgatgacagaggatttgatggatgg
aatgctggaagagatagggatgcatacagtagcttcggtgcaagaagtgatcgtggttca
ggaaaatccagcttctttggtgaccgtggaaatggctcacggggaagatttgatgagcgt
ggtggaagaggcagtgattttgatggcattggcactcgtggtgacagaagcggctttgga
agatttgaacgtggtgggaacagtcgttggtctgacaagtgtgatgaagatgactggtcc
aaaccacttgcaccaagtgaacgtatggagcaggagctctttgctggtgggaacactggc
attaactttgagaaatatgatgacattccagttgaggcaacaggcaacaactgccctcca
cacattgaaagtttcagtgatgttgacatgggggaaattatcatggggaacattgagctc
accagctacactcgacctactccagtgcagaaatatgctatccctatcatcaaagagaag
agagatttgatggcttgtgcccagacagggtctgggaaaacagctgcatttcttctgcct
atactgagtcaaatatatgcagatggcccaggtgatgccttgagagctatgaaggaaaat
ggaagatatggacgtcgtaagcaatatccaatctcgttagttttggctcctacaagagaa
ttggcagtgcagatttatgaagaagccaggaagttcgcatatcgttccaaagttcgtcct
tgtgttgtctatggtggtgctgacattggccaacagatacgtgacttggagcgcggctgc
cacttacttgttgcaactccgggacgtcttgtagatatgatggaaagaggaaaaattgga
ctggacttctgcaagtacttggtattggatgaagctgatcgtatgcttgacatgggattt
gaacctcagattcgtcgaattgttgagcaggatactatgcccccaaagggtgtccgtcag
accatgatgttcagtgctacctttccaaaggaaatccagatgcttgctcgtgacttctta
gacgaatatatctttctggctgttggcagagttggctctacgtctgagaacattacacag
aaagtagtgtgggtggaagagtcagacaaacggtcattcctgcttgacctcctaaatgcc
acaggtaaagactgtttgggagaattccaacacaactctaatggctcaggcaaagattcc
ttgacattggtgtttgtggaaactaaaaaaggggctgactccctggaagatttcctgtac
catgaaggatatgcttgtacaagtatccatggtgatcgttcccagcgagacagagaagaa
gcattgcatcagttccgttcgggtagaagtcccatcttggttgccactgcagtagctgca
agaggcctggatatttcaaatgtaaaacatgtcatcaactttgatttgccaagtgacata
gaagaatatgttcatcgcattggtcgtacagggcgtgtggggaaccttggtcttgccaca
tcattcttcaatgaaaggaacataaacattacaaaagacttgttagatcttcttgttgaa
gctaagcaagaagtgccatcttggctagaaaacatggcatatgagcagcaccacaagggt
ggaagtagtcgtggacgatctaaaggccgtttcttcagccggggggggttagtgccaaga
gactag
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integrated database retrieval system
