Sphaerodactylus townsendi (Townsend's least gecko): 125431921
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Entry
125431921 CDS
T08213
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
Motif
Other DBs
NCBI-GeneID:
125431921
NCBI-ProteinID:
XP_048351099
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Position
LG04:complement(40849171..40881411)
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AA seq
739 aa
AA seq
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MAVLLAPTWLLVMVVTIYIELLRSTQAGAYYGIKQMPPQVPQYQALGQQQIPHMPLGKDG
IPLQRMGKEGPPPMPYGKEYVPQFLKEIPPLPMLGKERISKKQKEIPIAGLRGERGPPGE
PGPRGPTGPPGIPGHGVPGAKGKPGPQGYPGIGKPGMPGMPGKLGAMGPPGQRGEMGPKG
EIGPMGIPGPQGPPGPHGLPAIGKPGDRGLPGQPGPKGEPGMKGLPGIQGPAGPKGDKGI
GIPGLPGLKGQPGLPGPLGPVGLPGIGKPGLIGFPGPQGPTGKPGLPGKPGPQGLGGAPG
IQGPPGLPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGVPGIGKPGFPGPKGDRGMG
GIPGPLGPKGEKGHMGPPGMGGPPGEPGPPGLPGLMGPPGGMGFPGPKGEVGVIGPQGPL
GPKGELGLQGFPGKPGFPGEVGPPGLRGLPGPIGPKGEAGHKGLPGLPGAHGPMGPKGEP
GIPGAQGHQGPSGIPGIAGPSGPIGPPGLPGPKGERGVQGPPGLPGMGKPGIAGAQGPPG
KPGVIGLPGQPGTQGPPGPPGPPGPPVIIQPTPPAIGQYLPEMGPGIDGVKTPHGYKGEK
GKNGGVVYEMPAFTAELTTPFPRVGVPVMFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAY
HVHCKGGNVWVALFKNNDPLMYTYDEYKKGFLDQASGSAVIQLMQGDRVYIQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgctagcaccaacctggctgttggtgatggttgtaaccatttacattgag
ctactgagatcaactcaagctggtgcttattatgggatcaagcagatgcctccacaagtg
cctcagtaccaagccctcggacaacaacaaatacctcacatgccactgggcaaagatggt
attccactgcaacgcatgggcaaggaggggcctccacccatgccttatgggaaagaatac
gtgcctcagtttttgaaagaaatcccaccactccctatgcttggcaaggagaggatttca
aagaaacagaaagaaatcccaatagctgggttgagaggtgaacgtggtcctcctggggag
cctggaccaagagggcctactggacctccagggataccaggacatggagtgccaggagcc
aaaggaaaaccaggtcctcaaggatacccagggattggaaaaccaggaatgcctggaatg
ccaggaaaactaggagcaatggggcctccaggacaaagaggcgagatggggccaaaagga
gagattggacctatgggtattccaggacctcaaggtccgccaggaccacatggactacct
gcaataggaaaaccaggtgatcgaggtttgccagggcaaccaggaccaaagggtgaacca
ggaatgaaaggactgcctggaatacaaggtcctgctggtccaaaaggagataaaggcatt
gggattccaggactgccaggattaaaaggtcaaccaggtttgcctggccccctaggtcct
gttggacttcctggaataggcaaaccaggactgattggttttccaggcccacagggacct
acaggcaaacctgggcttccagggaagccaggacctcaagggttaggtggagcccctgga
attcaaggtcctcctggccttccaggtataggaaagccaggtcaagatggaatcccaggt
cagccagggtttcctggtgggaaaggtgagcaaggtttgccaggtttaccagggcctcct
ggagtacctgggattggaaagccaggtttccctggtcctaaaggtgaccgtggcatgggt
ggtattccaggaccacttgggcctaaaggtgaaaaggggcatatggggccacctggaatg
ggtgggccaccaggagagccaggtccaccagggttgccaggacttatgggtccccccggt
ggtatgggattcccaggccctaaaggagaagttggagttattgggcctcaagggccactt
ggtccaaaaggtgaacttggcttacaaggttttccaggaaaacctggctttcctggggaa
gtgggacctccaggtctacgaggattaccaggtccaattggaccaaaaggagaagccggt
cacaaaggcttgcctggtctacctggtgctcatggacctatggggcccaaaggagagcct
ggaatcccaggagctcaaggccatcaaggcccttctggaattccaggcatagcaggaccc
agtggcccgattggacctcctgggcttcctgggcctaaaggggaacgaggtgtacaaggt
ccaccaggtcttccaggaatggggaaacctggtattgctggggcacaagggccgcctgga
aagcctggagtgattggtttacctggccaaccaggtacccagggacctccagggcctcct
ggtccccctggccccccagtaataatccaacccacaccaccagcaattgggcaatatttg
cctgagatgggcccaggcattgatggagtaaagactccacacgggtacaagggggaaaaa
ggcaaaaatggtggtgtggtctacgagatgccagctttcacagccgagctcaccactcct
ttcccacgggtgggagtgcctgtgatgtttgacaagctcctctataatggcaggcagaat
tataatccacagactggcatcttcacctgtgaaattcctgggatttactactttgcctac
catgttcactgtaaaggagggaatgtctgggtggctttgttcaaaaacaatgatccattg
atgtacacctatgatgaatacaagaaaggattcctggaccaagcttcagggagtgctgtc
attcagctgatgcagggagacagagtgtatatccagatgccatctgaacaggcagcagga
ctctatgccgggcaatatgttcattcatctttttcaggatatttgttgtatcccatgtaa
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