Sphaerodactylus townsendi (Townsend's least gecko): 125431972
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Entry
125431972 CDS
T08213
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125431972 (DSCAM)
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
DSCAM family
125431972 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
125431972
NCBI-ProteinID:
XP_048351188
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All DBs
Position
LG04:complement(69137599..69623471)
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AA seq
1772 aa
AA seq
DB search
MAGQRVELPCKASGHPAPKYRWLKDNVPWEPDSRFRLTVMGLLIENTRSSDSGNYVCEVW
NNYGTAEVIGRLHVKQPLKVTISPRKVKSSVGSQVSLSCSVAGTEDPELFWYRNGEIINP
GNNVRIIGVNHETLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEK
VVSPGEGVSLMCSVKGTPLPTITWTLDEDPILKDGSHRISQIITSEGNVVSYLNISSTQV
RDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTLIHCRVIGYPYYSIK
WYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVP
PFIQPFESQRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRI
SNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGY
PVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADV
SKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYL
VSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREV
RARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHASSTY
NIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGI
IRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLDNLKKFTQYGMVVQACNRAGIGPSS
QEIITTTLEDVPSSPPENVQAVATSPETISITWSTLAKDALNGILQGFRVIYWANLLDGE
LGEIKNITTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVK
AAAASTSTVFVSWLPPIKLNGVIRKYTVFCSHPYPTVISEFEASPDSFSYRIHNLSRNRQ
YSVWVVAVTAAGKGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIILPCKAVGDPAPT
VKWMKESNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVATNNWGSDEIILNLQV
QVPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSY
RLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNL
IGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLTKSYIVYDLQEATWYELQMRVCNSAGC
AEKQAKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVLLLVV
RRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTME
TIDDRSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNA
KTGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTD
SLTSSTPSESGICRFTASPPKPQDGGRVTNMAVPKAHRPGDIMHLPPYLRMDFLLNRGVP
GTSRDLGLGQACLEPQKSRTLKRPTVLEPIPMEASSTREVQSWQPGAVATLPQREGAELG
QAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacagcgagtggagctgccttgcaaagcatctggacacccagcaccaaagtac
cgttggctgaaagacaacgttccctgggagcctgacagcaggttccggcttactgtgatg
ggcctgctgatagaaaacacccgctcttcagactcaggcaactatgtgtgcgaagtctgg
aacaattatggtacagctgaggtgataggccgcttacatgtaaaacagcctctcaaagtc
accatcagtccacggaaagttaagagcagtgtgggtagtcaagtgtccttgtcctgcagt
gtggctggaactgaggaccctgaactcttctggtaccggaatggtgaaatcatcaatcct
ggaaataatgtgaggatcattggggtcaatcatgagacccttattatggatggaatggcc
aaaagcgatggtggggcgtaccagtgttttgtacgcaaggacaagatgtctgcacaagac
tatgttcaggtggtgctagaagatggaactcccaagataatttctgccttcagtgagaaa
gtagtaagtccaggagagggtgtttctttgatgtgcagtgtaaaaggaactcctcttccc
acaatcacatggacattagatgaagatcccatcctaaaagatggctcccatcggatcagc
cagatcatcacctctgaggggaatgtggtcagctatcttaatatctccagcactcaggtc
cgagatggcggggtctatcgttgtactgccaacaactctgctggagtcgtcctgtaccag
gctcgaataaacgtaagagggcctgccagcattcgaccaatgaaaaatattacagcaata
gctgggcgggacaccttaattcactgtcgggtcattggctacccatattactctatcaag
tggtacaagaattctaatctgcttccttttaaccatcgtcaagtagcctttgaaaacaat
ggaacgctgaagctctcagatgtacagaaggaagtggatgagggcgaatatacatgcaat
gttctcgttcaaccccagctatccaccagccagagtgtacatgtgactgtaaaagtacca
ccttttatccagccttttgagagtcagaggttttccattggacagagagtcttcatacca
tgcgttgtggtctcaggggatttgccaatcacaatcacttggcagaaagatggcaggcca
atcccagccagccttggtgtaaccattgacaacattgacttcaccagctccttaaggatt
tctaatctttccctcatgcacaatgggaattatacctgtatagctcgaaatgatgcagca
gccgtggagcaccaaagccaattaattgtaagagttccccccagatttgtggttcaacca
agtgatcaagatgggatttatggaaaagctgtcattctgaactgttctgcagaaggctat
cctgtccccacaattgtttggaagtactcaaaaggtgctggagtcccccagttccagcca
attgccttgaatgggcggatacagcttctcacaaatggctccttgttgatcaagcatgta
ctggaggaagatagtggatactacctctgcaaggtcagcaatgatgtgggggctgacgtc
agcaagtccatgtacctcactgttaaaattcctgctatgataacctcctatcccaacacc
accttggcaacacagggtcaaaagaaagagatgagttgcacagcacatggggaaaaaccc
atcatagtccgctgggagaaagaagacagaataattaatcccgaaatgtcccggtatctt
gtttctacaaaggaagtgggtgatgaagtgatctctacactgcagattttgccaacggta
cgagaagactctggtttcttctcctgtcatgccatcaattcatatggggaggaccgtgga
atcattcagctcactgtacaagaacccccagatcctcctgaaatagaaatccgggaagtg
agagcccgcagcattgccctcagatggactatgggatttgatggaaacagtccaatcaca
ggctatgatatagaatgcaagaacaagtctgattcctgggattctgttcaaagaaccaaa
gatgtttccccccagctgaatcaagccactatcattgaccttcatgcttcctctacctac
aatatccgcatgtatgcaaaaaaccgcattggcaagagcgaggccagcaatgagcttaca
atcaccacggatgaagcagctcctgatggaccccctcaggatgttcagcttgagcccata
tcttcccaaagcattcgagtaacctggaaggctccaaagaaacacttgcaaaatgggatt
attcgcggataccagattggttaccgggaatacagcgcaggcggcaatttccagttcaac
atcatcagtattgatacaactggtgacagtgaagtttacactttagataacttgaaaaaa
ttcacacaatatggcatggtggtacaggcatgtaatcgagctggaataggaccatcttct
caggaaatcattacaacaacacttgaggatgttccaagttcccccccagagaatgtccag
gctgttgctacatcaccagaaaccatctcaataacctggtctactcttgccaaagatgcc
ctcaatggaattctacagggattcagagttatatattgggctaatcttttagatggagag
ctgggggaaattaaaaatattaccaccacccagccctcgttagagcttgatggcctggaa
aagtacacaaactacagcatccaggtgttggccttcacacgagctggagatggagtcagg
agtgagcagattttcacacgcacaaaagaggatgttccaggtcctcctgctggagtcaaa
gcagctgcagcttcaacttccactgtgtttgtatcttggctaccacccatcaaattgaac
ggtgtcatccgaaagtacactgtattctgctctcatccataccccacagtaatcagtgag
tttgaagcatctccggactcattttcctacagaatccacaacctgagtcgaaatcgacag
tacagtgtctgggtagtagctgtgacagctgcaggaaagggcaacagcagtgaaattatc
actgtggaaccattagccaaagctcctgccagaattctgacattcagtggcacagttaca
accccatggatgaaggatattatcctcccttgcaaagcagttggagacccagctccgacc
gtcaaatggatgaaagaaagtaacgggacacccagtctagtgatgattgatgggcgaaga
agcatctttagcaatggcagctttgtcatccgtaccgtgaaagctgaggattcaggatat
tacagttgtgtagccactaacaattggggatcagatgaaattattttgaatttacaagta
caggttccaccagatcaacctagacttacagtgtctaaaaccacatcttcctcaatcact
ctttcctggatacctggagacaatggcggcagctctattcgaggttatatactgcaatac
tcagaagacaacagtgaacagtggggcagttttcccattagccccagtgaacgttcctac
cgtttggagactttgaagtgtggtacctggtataagttcacattgactgctcagaatgga
gtggggccaggacgcattagtgaaatcatagaagccaaaacacttggaaaagaaccacag
ttttcgaaagaacaagagctttttgccagtattaacaccactcgtgtaagattaaatctt
attggctggaatgatggcggttgtccaatcacctcctttaccctggagtacaggccattt
gggaccactgtatggacaacagctcaacgaacctctcttactaagtcatatatcgtgtac
gaccttcaggaggcaacctggtatgagctacagatgagggtctgtaatagtgctggttgt
gcagagaaacaggccaaatttgcaacactcaactatgatgggagtacaatccctccactc
attaagtcagttgtccaaagtgaggaaggtctggcaaccaatgaagggctaaagatgctg
gtgaccatttcctgtatcttggttggggtcttgctgctttttgtgcttctgctggttgtg
agaaggaggaggagggaacaaagactgaagagactcagagacgcaaaaagtctggctgaa
atgcttatgagtaagaatacaaggacttcagatacacttaacaagcaacagcagacactg
agaatgcacatagacattcctagagctcagcttctgattgaagagagagatacaatggag
accattgatgatagatctacagtcttgttaaccgatgctgattttggagaaacatcaaag
cagaaatcactgactgtcactcacacagtacattaccagtctgtctcacaagccactgga
ccactagtagatgtttctgatgcacggccagggacaaatcctacaacacgaaggaatgca
aaaacggggcccacagctcgcaacagatatgctagccagtggactctcaacagaccccat
cccactatatcagcccacaccttaacaacagattggaggctaccaacccccagggctgca
gggtctgtggataaagagagcgacagttacagtgtcagtccatctcaagatacagatcgc
gctcgaagcagcatggtctccacagaaagtgcctcctcaacgtatgaagagctagcaaga
gcatatgaacatgccaaaatggaagagcagctgcgacatgccaagtttaccatcacagaa
tgcttcatatcagatacctcctcagaacagctaacggcagggactaatgactacacagac
agcctgacctcaagcaccccatcagaatcggggatttgcaggtttactgcatcacctccc
aaacctcaggatggaggacgcgtgacaaacatggctgttccaaaggcacatcggccaggt
gacatcatgcatttgccaccgtatcttcgaatggactttttgttaaatcgaggtgttcca
ggcactagcagagacctgggtttaggacaagcctgtctggaacctcagaaaagtcgaacc
ttgaagcgtccaacagttttggagccaatacctatggaagcatcatcgacgagagaagta
cagtcatggcaacctggtgccgtagcaacattacctcagcgagaaggagctgagctagga
caggcagctaaaatgagcagctcccaagaatcccttctggactcccgaggccacttgaaa
ggaaacaatccttacgcaaaatcttatactttggtataa
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integrated database retrieval system
