Sphaerodactylus townsendi (Townsend's least gecko): 125432046
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Entry
125432046 CDS
T08213
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125432046 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125432046 (ROBO1)
Cell adhesion molecules [BR:
stow04515
]
Immunoglobulin superfamily
ROBO family
125432046 (ROBO1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
125432046
NCBI-ProteinID:
XP_048351327
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All DBs
Position
LG04:55772899..56442221
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AA seq
1675 aa
AA seq
DB search
MKWKHYSFTVVVAVLSLSWFHQLMGQLIPDSDDLEKGTDSGTPLPTSDNEDNSLGYTGSR
LRQEDFPPKIVEHPSDLIVSKGEPATLNCKAEGRPAPTIEWYKGGERVETDKDDPRSNRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPADVM
VAVSEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVIVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEPPHFVVKP
RDQVAALGRTVTFPCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITS
VQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCV
AAGTLMPTIIWRKDGILLSTQDSRIKQLETGTLQIRYAKLGDTGRYTCIASTPSGEASWS
AYIEVQEFGVPVQPPRSTDPNLIPSAPSKPEIIDVSRNTVTLSWQPNLNLGATPTSYIIE
AFSHAAGSSWQTVAENVKTETFAVKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPATIS
NGESDWLIFDVRTPTKNSVVIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSA
PPQSVSVSKSDGNGTAIVITWQPPPEDTQNGMVQEYKVWCLGNESRYHMNKTVDGSTFSV
VIPSLIPGIRYSVEVAASTGAGFGVKSDPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLANTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNINEPASQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIA
NYNNQLENKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQ
LIQSNISNVNSNVNSGSGDLNEKHWKPSGQQKQEVAPVQYNIMEQNKLNKDYRVSDNAPT
IPYNQSYDQNTGGSYNSSDRGSNTSGSQGHKKGARTPKASKQSGMNWTELLPPPPVHPPP
HSSSEDYSISVNESSHFSKTNFSYDQEIPCPVPPARMYLQQDDLEEEEEDERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEELHPMLQECSEEINHLQHPPDRRRQPVSPPPPPRPI
SPPHTYGYIAGPLLSDMDTDAPEEEEDEADLEVAKMQSRRLLFRGLEQTPASSVGDLESS
VTGSMINGWGSASEDDNISSGQSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARHQNQD
AVGGRRLYHASHCPRPTSPVSTDSNMSAAVIQKVRPAKKQKHQQGHLRREVYTDDLPPPP
VPPPAIKSPTAQSKSQMEVRPVMLPKLSSIEPRTERIAERKGTSYKGKEGSDGRQHSDVR
TSSGERRESQEQQSDSKLRGNKVARRDGTPAKTHLLQEDILPYCRPTFPTSNNIRDPSSS
SSMSSRGSGGRPRVEQANLSRRNVAEMQVFRTYERGEDDDDEEEEEEEELQETES
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacattattcttttactgtcgtggtagctgtactcagcctgtcctggttc
catcagttaatgggtcagcttattccagactctgatgacctagagaaggggaccgacagt
ggaacgccacttcccacctcagataatgaggacaattcgttgggctatacaggttcgcgt
cttcgccaagaggatttccccccaaagattgttgaacatccttcggatctaattgtgtct
aaaggtgaaccagcaactttgaactgtaaggctgagggcaggcctgcaccaactattgaa
tggtataaaggaggagaaagggttgaaactgacaaagatgatcctcgctctaataggatg
ttgctgccaagtggatctttatttttcttacgtatagttcatggtcgcaagagtagacct
gatgaaggagtctatgtctgtgtagcaaggaattaccttggtgaagctgtgagccataat
gcatcgttggaagtagcaatactacgtgatgacttcagacaaaaccctgcagatgtcatg
gtagctgtaagtgagccagctgtaatggaatgccaacctccaagaggccatcctgagcct
acaatatcatggaaaaaggatggatctcctctggatgacaaagatgaaagaattactatt
agaggaggaaaactgatgatcacctatactaggaagagtgatgccggcaaatatgtgtgt
gttggaacaaacatggtgggagaaagggaaagtgaagtggcagagcttacagttttagaa
agaccttcatttgtgaagaggccaagtaatttagcagtaattgtggatgacagtgcagag
tttaagtgtgaagcacgtggtgatccagttcctacagtaagatggcgaaaggatgatgga
gaattgcctaaagcaagatatgaaatccgtgatgatcacaccttgaaaatccgaaaagtt
atggcaggagacatgggatcttatacttgtgttgcagaaaatatggttggaaaagcagaa
gcatcagcaactctaacagttcaagttgtatctgagccaccacattttgttgtgaaacct
cgtgaccaggtggctgcgttaggcagaacagtgactttcccgtgtgaagcaacagggaac
cctcaaccagcaatattttggcgaagagaaggaagtcagaacctgctattttcataccag
cctcctcaatcttctagccgtttttctgtctcacaaactggtgatctcactattacaagt
gtacagcgatccgacgttggatattatatctgccaaaccttaaatgtagcaggaagcatc
acaacaaaagcctatttggaggttactgatgtaattgcagaccgacctcctcctgtcatt
cgacagggccctgtgaatcaaacagtagctgtggatggtactttagtactgagctgtgtg
gctgcaggtactttaatgcccaccataatctggagaaaagatggcattcttctttccaca
caagactcccggatcaagcagctagagactggcacactacagattcgatatgccaagctg
ggtgatactggtcggtatacatgcattgcttcaaccccaagtggtgaagcatcgtggagc
gcatacattgaggttcaagaatttggagtgcctgtacagccaccaagatctactgaccct
aacctgattccaagtgcaccatcaaaaccagagattattgatgtcagcagaaacacagta
acattgtcgtggcagcctaacttgaatttaggtgcaactccaacctcttatataatagag
gccttcagccacgctgctggcagtagctggcaaactgtagcagaaaatgtgaaaacagaa
acatttgctgttaaagggctgaaaccaaacgcaatttatctcttccttgtacgggcagca
aatgcatatggaattagtgatcccagtcagatatcggatccagtgaaaactcaagatgtt
ccccctacaagtcagggtgtagatcacaagcaagtacagagagaactgggtgatgttgtc
ctacatcttcataatcccaccatcctttcttcttcctcgattgaagttcattggacagtt
gaccagcagtcccagtatatacaagggtataaaattctgtataggccagcaactatttct
aatggagaatctgactggttgatttttgatgtgaggaccccaacgaaaaacagtgttgtc
attcctgaactgaaaaaaggtgtaaactatgaaattaaggctcggcctttttttaatgag
tttcaaggagctgatagtgaggtgaaatttgccaaaacactggaagaagctccaagtgct
cctcctcaaagtgtttcagtaagcaagagtgatggaaatggcactgcaattgtcataact
tggcagcctcctccagaggatacacagaatggaatggtccaggagtacaaggtctggtgc
cttggcaatgaaagtcggtaccatatgaataagacagtggatggttcaactttttctgta
gtaatcccatctctaattcctggtattcggtatagtgttgaagtggcagcaagtactgga
gctggttttggagtaaaaagtgatccacagtttattcaattagattctcatgggaaccct
gtgtcaccagaagatcaagtcagtttagcccagcaaatttcagatgttgtaaaacagcca
gcattcattgctggaattggtgctgcctgttggattatcctaatggttttcagcatttgg
ttgtaccgccaccgaaagaaacgaaatggactcgctaatacttatgctggtattagaaaa
gtcccgtcttttaccttcacaccaacagttacatatcaaaggggaggagaagccgttagc
agcggaggaaggccaggtcttttaaacatcaatgaacctgcctctcagccatggcttgca
gacacgtggcctaacactgggaacaatcacaatgactgctctatcaactgctgtacatca
ggcaatggaaacagtgatagcaaccttaccacatacagtcgaccagctgattgtatagca
aattacaacaatcagctggagaacaagcagacaaacctaatgctgcctgagtcaacagtg
tatggagatgtggatctaagcaataagatcaatgagatgaaaactttcaatagccctaat
ttaaaagatggaagatttgtcagccaaccagggcagcctacgccttatgccaccacgcaa
ctcatccagtcaaacatcagcaatgttaacagcaatgttaacagtggcagtggagatttg
aatgaaaagcactggaaaccttctggacaacagaagcaagaggttgcaccagttcagtac
aatattatggagcaaaacaaattaaacaaagattatcgagttagtgataatgctccaact
attccatacaaccagtcatacgaccagaatacaggaggatcctacaacagttcagataga
ggaagcaacacatctgggagccaagggcacaagaagggtgctcgaacacccaaagcttca
aagcagtctggcatgaattggacagaactacttcctccacctcctgtacatcctcctccc
catagtagtagtgaagattatagtatttcagtgaatgaaagttctcatttttctaaaact
aattttagctatgaccaggaaatcccatgcccagtaccaccagccagaatgtatctacaa
caggatgatctagaggaagaggaagaggatgaacgaggtcccacaccaccagttcgaggc
gcagcttcatctccagcagctgtgtcctatagccatcagtctactgccacactaactcct
tcaccacaagaagaactccatcctatgttgcaggaatgctcagaagaaataaatcacttg
caacacccaccagatcggaggcgtcagccagtgagtcctcctccacctccaaggcctatc
tctccaccacatacctacggttatattgcaggacctcttctatcagatatggacacagat
gcaccagaggaagaagaggatgaagcagacctagaagttgccaagatgcaaagtagaaga
ctcctgtttcgtggccttgagcagacacctgcttcaagtgtaggagatctggaaagctct
gtaacaggttccatgattaatggctggggatcagcctcagaagatgacaacatatctagt
ggacagtctagtgttagctcatctgatggatccttttttacagacgcagattttgcacag
gctgttgcagcagcagcagaatatgctggtcttaaagtagcaaggcatcaaaatcaagat
gctgtaggaggacgtagactttatcatgcctcacactgccctagacccactagtcctgta
tctactgacagcaatatgagtgctgctgtaatacagaaggttcgacctgccaaaaagcaa
aagcaccagcaaggacatctgcgcagagaagtctacacagatgacctgccaccccctcct
gtaccgcctcctgctataaaatctcccactgcccaatccaaatctcaaatggaggttcga
cctgttatgttgccaaagctctcttctatagaaccaagaacagaaagaatagcggaaaga
aaaggaacaagctataaagggaaagaaggttctgatggccgccagcattctgatgtgcgg
acaagttcaggggagcgtcgggaatcacaggaacagcaaagtgatagcaaactacgagga
aacaaagtagcaaggcgagatggcacaccagcaaaaacacatcttcttcaagaggatatt
ctgccatattgtagacctacatttccaacatcaaacaacattagagatcccagttcctca
agctccatgtcatcaagaggatcaggaggtagaccaagggtagaacaagcaaatctaagt
cgaagaaatgttgcagagatgcaagtatttagaacatatgagagaggtgaggatgatgat
gatgaagaagaagaagaagaagaagaattacaggaaactgaaagctga
DBGET
integrated database retrieval system
