Sphaerodactylus townsendi (Townsend's least gecko): 125432093
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Entry
125432093 CDS
T08213
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125432093 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stow01009
]
125432093 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stow04515
]
125432093 (PCDH9)
Protein phosphatases and associated proteins [BR:
stow01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125432093 (PCDH9)
Cell adhesion molecules [BR:
stow04515
]
Cadherins
Protocadherins
125432093 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
V_ATPase_I
MAP17
EphA2_TM
RCR
DUF6249
DUF6377
7tm_3
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125432093
NCBI-ProteinID:
XP_048351393
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All DBs
Position
LG04:127258742..128217803
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AA seq
1224 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAFAQELIYTIREELPENVPIGNIPKDLNISHISSATGTST
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDRERLCAGAAYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDRELKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVYIPENAPIGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRPLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRRTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVISPSSNITFKLVPLSAIPGSVVAEVFAVDIDTGMNAELQYTIVSG
NNKGLFRIDPMTGNITLEEKPTPTDVGLHRLVINITDLGYPKSLHTLVLMFLYVNDTAGN
TTYINDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDVVHEPI
NGTISLPAELEEQSIGRFDWGAAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKAKGPLHGRQALNFGDMP
KYLWEIWVPDKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDE
FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPALGSYQ
QPKSPLSTFAPPKDWIKKDKLVNGHTLTRSWKEDSNRNQFSDRKQFGSGEGHFNPTHMTD
IPLANLKAYKQASAAVESPKENQL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgccctcattgcctgtcttcggctggattct
gccttcgcccaagaacttatttacaccattcgggaggagctgccggaaaacgtgcccatt
gggaacataccaaaggatttgaacatctctcacatcagttctgccacagggaccagtaca
agtcttgtctacagactggtgtccaaagcaggggatgcccctttggtcaaagtgtccagc
acgacgggggagatcttcaccacctccaaccgaatcgaccgggagcgcctctgcgccgga
gccgcgtacgcggaggagaacgagtgcttcttcgagctggaggtggtgattctccccaac
gactttttccggctgatcaagatcaaaatcatcgtgaaggataccaatgacaacgccccc
atgttcccttcgccggtcatcaacatctccatcccggaaaacactctgatcaacagccgc
ttccccataccctcggctacggaccccgataccggcttcaacggggtgcagcactacgaa
cttttgaacgggcagagcgtctttgggctggatatagtggagactccggaaggcgagaag
tggccacagctgattgtccagcaaaacctggacagggagctgaaagacacgtatgtaatg
aaaatcaaagttgaggacggaggaaccccccagaaatccagcacggctatcctccaggtc
acagtaagtgatgtcaatgacaacaggccggtttttaaagagggtcaggtggaggtgtac
atccccgagaatgcccccatagggacctccgtcatccagcttcatgctacagatgcagac
gtaggaagcaatgcagagatcagatatatttttggtgcccaggttgctcctgcaactaaa
agactctttgctttaaataacaccactgggctgattacagttcagagacccttagaccgg
gaggagactgctattcacaaagtgacggtgctggcaagcgatggcagctccacgcctgcc
cgggcaacagttaccatcaacgtgactgatgttaatgataaccccccaaacatagatctc
aggtacattataagtcccatcaacggcacagtgtacttatctgagaaagaccctgtcaat
accaagattgccctaattacagtctcagataaggacacagatgtgaatggcaaagttatc
tgtttcattgagagagaggtgccattccacttgaaggctgtctatgataaccagtacttg
ttagagacttcttccttgctggactacgagggcaccaaagaattcagctttaagatagtg
gcctccgattccggcaagcccagtctgaaccagaccgccctagtaagagttaagctcgag
gatgaaaatgacaaccctccaattttcagccagccggtaattgagctgtcagtttccgaa
aacaaccgccgtggtctgtacttaaccactattagtgccacggatgaggacagtgggaaa
aatgcagacattgtgtatcagcttggccccaatgcttccttttttgatttggatagaagg
acgggggttttgacagcctctcgagtcttcgaccgagaagagcaggagaggttcattttc
acggttacggcacgagacaacggcaccccgcccctgcagagccaagccgctgtcatagtt
acggtactagacgaaaacgacaacagtcccaaattcactcataaccattttcagttcttt
gtgtcggagaacttaccaaagtacagcaccgtgggagtgatcacagtcactgacgcagat
gcaggcgagaataaagctgtgaccctttccatcctgaacgacaatgagaactttgtgctg
gatccttactctggagttataaaatcaaacgtgtcttttgatcgagagcagcagagttcc
tacacctttgacgtcaaggccatcgacggtgggcaaccgccccgttcatcgaccgcaaaa
gtcactataaacgtcatggatgttaatgacaacagtcctgtggtcatttccccgtcttct
aacattactttcaaactggtgcccctttcggctatccccggatccgtggtagcggaagta
tttgctgttgacatcgacacgggaatgaatgccgagcttcaatacaccattgtcagtgga
aacaacaaaggtttatttcgtatcgacccaatgacgggtaacattaccctggaagagaag
ccgactccgactgatgtggggctgcatcggttagtgatcaacatcactgacctgggttat
cctaaatccctgcataccctggtcctcatgtttttgtacgtcaacgacacggctggaaac
accacgtatatcaacgacttgatccgcaggactatggaaacccccttggacaggaacatt
ggagacagcagccagccctaccaaaacgaggactaccttaccatcatgatcgccattgtt
gcgggcgccatggtggtcatcgtggtgatctttgtcaccgtcctggtccgctgccgccac
gcctccaggttcaaagcggctcagaggagcaagcaaggcgccgagtggatgtcccccaac
caggagaacaaacagaacaagaagaagaagcggaagaaacggaagtcccctaagagttcc
ctgttgaattttgttaccattgaggagtccaaaccggaggatgtggttcacgaacctatc
aacgggactattagccttccagctgagctggaggagcaaagtataggaagatttgactgg
ggcgccgcgccgcccaccacctttaaacccaacagccctgaccttgctaagcattacaaa
tctgcctccccgcagtctgcttttcatctgaagcctgacactcccgtctcggtgaaaaag
catcacgtgatccaagaactccctttggacaacacctttgttgggggttgtgacaccctt
tccaaacgctcttccactagctcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaaggcaaagggccccttgcacggccgacaggcactgaattttggagatatgccg
aagtacttgtgggagatttgggtacctgacaaaccatgggtgtcccagcgccgtgttaca
tttcacctccctgatggttcgcaagaaagctgcagtgacagtggtctaggagatcatgaa
cctgtgggtagtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaa
ttctacgaccaggcctcaccggacaagaggaccgaagctgatggcaactccgaccccaac
tctgatggacctctcggcccccgaggattagctgaagcgacagaaatgtgcactcaagaa
tgtctggttctgggtcattcggacaactgctggatgcctcccgctttgggttcataccag
cagccaaaatctccgctctccacctttgcgcctccgaaggactggattaagaaagacaaa
ctggtgaatggacatacattgaccagatcctggaaagaagatagcaacaggaaccagttc
agtgatcgaaagcaatttggatcaggggaagggcatttcaaccccactcacatgactgac
attcctttggctaacttgaaggcctataaacaggcctcggcggccgtggagagtccaaag
gagaaccagctataa
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