Sphaerodactylus townsendi (Townsend's least gecko): 125432164
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Entry
125432164 CDS
T08213
Symbol
ERCC4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03420
Nucleotide excision repair
stow03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125432164 (ERCC4)
03460 Fanconi anemia pathway
125432164 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stow03032
]
125432164 (ERCC4)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125432164 (ERCC4)
DNA replication proteins [BR:
stow03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125432164 (ERCC4)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125432164 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
125432164
NCBI-ProteinID:
XP_048351523
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All DBs
Position
LG04:155708129..155735076
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AA seq
912 aa
AA seq
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MAEVSSLSLEHETQIFLDLFHQDGLVICARGLGIDRLLLRFLQLYSVPTGLVLVLNTSPA
EEEFFIDQLRTRNVAHLPRRITNEIPSSSRYEVYMEGGVVFATSRILVVDFLTGRIPSDL
ITGILVYKAHRIIESCQEAFIMRLYRQKNKQGFIKAFSDNAVSFSTGFCHVERVMRNLFV
RKLYLWPRFHVTVHSFLEQHKPEVVELHVNMTPAMRAIQSSILDILNACLRELKHCNPAL
EVEDLSLENAIGKSFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFL
NLLESLRASEKAFGQNSGWLFFFSISSAISMFLELGSXKVQKYRLPDNKEKKKRKAPGKA
DVEEEKEQKRELVLENNPKWEALRDVLTEIERENADSKALGGPGEEPGGRTLICAGDDRT
CAQLKEYITAGTNAFLIRLYHKTFRKDKEVAEAFLKERKGAECQGRDAGEPLPKKAKKKS
SNPKKRKRKPELTLTQMVGRCEQETVXGGEPYEEVSSGPESGEEAGPKDFSLDLPSESCY
GVLKEPLTVIHPLSGCSDPYALTRVLHEVGPRYVVLYDAELTFVRQLEIYKASRPGKPLR
VYFLIYGGSTEEQRYLTTLRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDAAPAA
VSTDTRKAGGQDQKSVQHSIVVDMREFRSELPSLIHRRGIDIDPVTLEVGDYILTPDICV
ERKSVSDLIGSLNNGRLYGQCVSMCRYYKRPVLLIEFDPSKSFSLTPRTSFHQEISSSDV
TSKLALLTLHFPRLRILWCPSPYATAELFEELKQNRPQPDPSTAAAITADSESLPESDKY
SPGPQDFLLKMPGVNAKNCQAIMNHVKSLAELFTLSQDKLAELLGNAISAKQLYDFIHLP
YTDATSEGKTKK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtgtcatcgttgtcgctggagcacgagacgcagatcttcctggatcttttc
caccaggacgggctggtgatctgtgcccgcgggctgggcatcgaccgcctcctcctgcgc
ttcctccagctctactctgtgcccaccggcttggtcttggttctgaacaccagccctgca
gaggaggagttctttattgaccagttgaggacacgcaatgtggctcaccttcctcggcgc
attacgaatgaaatccccagcagcagccgttacgaagtgtacatggaagggggcgtcgtg
tttgccacgagccggatccttgtggtggattttttgacgggcagaattccttctgatctt
atcaccggcatccttgtgtacaaagcccacagaataatcgagtcctgccaagaggccttt
ataatgcggctctatcggcagaagaacaagcagggtttcatcaaagccttctctgacaac
gccgtttccttcagcactggcttttgtcacgtggaaagggtgatgaggaatctctttgtc
aggaagctttacctgtggccaaggtttcacgtgacggtgcactcctttttagagcagcac
aagccggaagtggtggaacttcacgtgaacatgacgccagccatgcgggccatccagagc
tcgatactggatatcctgaatgcctgtttgagagagctgaagcactgcaaccccgctctg
gaagtggaagatttgtcgctggaaaacgccatcggcaagtcttttgacaagacaattcgt
cactacctagaccctctttggcaccagcttggagccaagaccaagtcgttggtgcaagat
ttgaagattcttcggactttgctgcagtacttgacccagtacgactgtgtcacttttctc
aaccttttggaatctttaagagcgtccgaaaaggctttcggtcagaattcaggctggctt
ttctttttctcgatctcaagtgcaatctccatgttcttggaactcgggtcttgaaaagtg
caaaagtaccgccttccagataacaaggaaaagaagaaaaggaaggcgcctggaaaagca
gatgttgaggaagagaaagagcagaaaagggaactggtcttggaaaacaaccccaagtgg
gaagccctgcgcgatgtgctcacggagatcgagagggagaacgccgacagcaaagctctc
ggcgggccaggtgaggaaccgggaggacggacgctcatctgcgcgggggacgaccggacg
tgcgctcagctgaaggagtatatcactgctgggaccaacgctttcttgataagactctac
cacaaaacctttcggaaggacaaggaagtcgcggaagcattcctgaaggagaggaagggg
gccgagtgccagggcagggacgccggggagcctttgccgaagaaggccaaaaagaagtct
tccaatccgaagaaaaggaagaggaaaccagagctgactctcacacagatggtgggcagg
tgcgagcaggagactgtannagggggcgagccctacgaagaggtcagcagcgggccggag
agcggcgaggaagccggacccaaagacttctctctagacctgccctcggaatcttgttac
ggggtcttaaaggagccgctgaccgtcatccatcccttgagcggctgcagcgatccctac
gccctcacgcgggtcttgcacgaggtcggccccaggtatgtcgtcctgtacgacgcggag
ctgaccttcgtccgccagctggagatctacaaggccagcaggcccgggaaacctttgagg
gtttacttccttatatacggagggtcgacggaggagcagcgctacctgaccacgctgagg
aaggaaaaggaggccttcgagaaactcattcgagagaaggccagcatggtcatccccgaa
gaacgagaaggaagagacgagaccaatttggatctagtgcgggatgctgctcccgctgcc
gtttccactgacacgcggaaagcagggggccaggaccagaagagcgtccagcacagcatc
gtggtggacatgcgcgaatttcgcagcgagctcccgtctctgatccatcgccgaggcatc
gacatcgacccagtgaccttggaagtgggcgactacatcctcacgcccgacatctgcgtg
gagcgcaagagcgtcagcgacctgatcggctccctcaataacgggaggctctacggccag
tgcgtctccatgtgccgctactacaagcgccctgtcctcctcatcgaattcgaccccagc
aaatccttctctctcaccccgcggacgtctttccaccaagagatctccagcagcgacgtc
acttccaaactggccctgctgacccttcacttcccccgtctcagaatcctgtggtgtcct
tcgccttacgccaccgcagaactcttcgaggagctgaagcagaaccggccccagcctgac
ccgtcaacggctgcagctattacggcagattcggaaagcctcccagagtcagacaaatac
agcccgggcccccaagacttcttgctcaaaatgccaggggtgaacgccaaaaactgccag
gcgatcatgaaccacgtcaagagcctggcggagcttttcactctgtctcaggacaagctg
gcagaactgctgggcaatgctatcagtgccaaacagctctatgacttcattcatttgccg
tacacagacgctacctctgaagggaaaaccaagaagtga
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