Sphaerodactylus townsendi (Townsend's least gecko): 125433005
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Entry
125433005 CDS
T08213
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stow03032
]
125433005 (PIF1)
03029 Mitochondrial biogenesis [BR:
stow03029
]
125433005 (PIF1)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125433005 (PIF1)
DNA replication proteins [BR:
stow03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125433005 (PIF1)
Mitochondrial biogenesis [BR:
stow03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125433005 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Herpes_Helicase
UvrD_C_2
DEAD
AAA_7
AAA_16
PhoH
Mg_chelatase
RsgA_GTPase
NACHT
AAA
SLFN-g3_helicase
ABC_tran
DUF815
AAA_29
AAA_5
Motif
Other DBs
NCBI-GeneID:
125433005
NCBI-ProteinID:
XP_048353209
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Position
LG05:76771083..76785340
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AA seq
636 aa
AA seq
DB search
MQLSCQSDGRIRCTVAIEHLGAAVPSRVLLRDAWVTLGRDEFRELALQVTNSSGPEIPRN
FPLRRDGVRLFTRFMKDGKSSVRLGSGTKGVQLLFSNCPPDLLRRFIQTLRIKFKATQEG
VRPVSERTRLLSGLPRTFDTVSPVQVRDLQQGRVRQILADVATTPTKSQALCGELRKRAR
DESVGGNQVTEIQSAKKLPWLMRSRATLTQDQSMVLNAVLSGKNVFFTGSAGTGKSYLLK
KIVASLPPNSTYATASTGVAACQIGGTTLHAFAGIGSGKAPLHQCTELAQRSGVRLQWLN
CCHLIIDEISMVDGEFFDKLEAVARTIRKCEDPFGGIQLIICGDFLQLPPVSKGTEQAKF
CFQAKSWMKCIHLNMELTKVQRQTDRDFIALLDAVRQGRCTEEVTKQLTATAAHRVERDG
ILATQLCTHKDDVELTNTKRLQKLSGEPRCFKAVDSDPGLVKTLDAQCPVSSIIELKLGA
QVMLTKNLDVSRGLVNGARGVVIGFETEGKGLPKVRFLCGVTTLVGLERWVLKGPAGTHL
TRQQLPLKLAWAISIHKSQGMSLDCVEISLARVFECGQAYVALSRARSLTGLRVLDFDPS
AVKANSCVLHFYRCLRKEQFLAQASLKSYIQADKEN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcagctgccagtccgacgggcgcattcgctgcactgtagctatcgagcatttg
ggtgcagcagtcccgagtcgagtgctgcttcgggacgcctgggtgaccttgggccgggat
gagttccgagagctggcgttgcaagtgacaaatagcagtggtccggaaattccccgcaac
ttccctttacgccgggatggagtgcgactgttcacacgtttcatgaaagacgggaaaagc
tcggtgcgtttgggttcaggcaccaagggcgtgcagctgctgttctcgaactgccctccc
gacctgttgcgtcgcttcattcagacgctgcgcatcaaattcaaagcaacccaggagggg
gttcggcccgtgagcgaacggacgaggcttctctctggcctgccgcgcaccttcgacaca
gtcagccccgtgcaggtccgcgacttgcagcaggggagggtcaggcaaatcttggctgat
gtggccaccaccccgaccaaaagccaggccctttgcggtgagcttcgaaaacgtgcccgg
gatgaatcggtgggtggcaaccaggtgactgaaatacaatcagctaagaagctgccttgg
ttgatgcgctccagagccacactcacacaggatcaatcaatggtgctgaatgcagtgctg
agtggaaagaatgtcttcttcacaggcagtgctgggactggaaaatcctacttgctgaaa
aagattgtggcctcactgcctccgaacagcacttatgccacagccagcacaggagtagca
gcatgtcaaattggtggcaccaccctccatgcctttgcaggtattggttctggaaaggcc
cccctccaccagtgcactgagctggctcagaggtcaggggtacggctacagtggctaaat
tgctgtcatctgatcattgatgagatctctatggtggatggtgaattctttgataagctg
gaggcagtagccagaactatcaggaaatgtgaggatccatttggaggaattcagctcatc
atctgtggagacttcctgcaactacccccagtcagcaaaggcaccgagcaagccaagttt
tgcttccaggcaaagagttggatgaagtgtatccacttgaacatggaactgaccaaagtg
cagaggcaaactgacagggacttcattgctcttctggatgcagttcggcagggcagatgc
acagaggaggtcaccaaacagttaactgcaacagcagcccacagggtggaaagagatgga
atcctggccactcagttgtgcacccacaaggatgatgtggaactgacaaatacgaaacga
ctgcagaagctatctggagaaccacggtgcttcaaggcagtggatagtgaccctgggttg
gtgaaaactttagatgcacagtgtcctgtaagcagcatcattgaacttaaactcggtgcc
caggtgatgcttaccaagaatttggatgtatcccggggtttggtaaatggggctcgtgga
gttgtgattggttttgaaactgaaggaaaaggactgcctaaagtgaggtttctgtgtggt
gtcactactcttgttgggttggaaagatgggtcttaaagggaccagcagggacacatctg
actcgccaacaattgcccctaaaacttgcctgggccatttccatccacaagagtcagggt
atgtctctagactgcgttgaaatctccctagctcgtgtctttgaatgcggccaggcttat
gtagcgctttctcgggcacgtagcttaacaggacttcgtgttctggattttgatcccagt
gcagtgaaagctaattcttgcgtgttgcatttctaccgttgcttgaggaaagaacaattt
ttagctcaggcctctctgaaatcctacattcaagctgataaggaaaactga
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