KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125433151
Entry
125433151         CDS       T08213                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125433151 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stow03019]
    125433151 (RAE1)
   03036 Chromosome and associated proteins [BR:stow03036]
    125433151 (RAE1)
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125433151 (RAE1)
Chromosome and associated proteins [BR:stow03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    125433151 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st NBCH_WD40 eIF2A WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 PepSY B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 125433151
NCBI-ProteinID: XP_048353513
LinkDB
Position
LG05:120519148..120535730
AA seq 369 aa
MSLFGSTSGFGAGGTSMFGSTAADNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTIHWIKAPNYTCVMTGSWDKTLMFWDTRSPTPMMTLQLPERCYCADVVY
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacatcagggtttggagctggcggcaccagcatgtttggcagc
acagctgcagataaccacaacccaatgaaggacattgaagttacctctcctcctgatgac
agcattggttgcttggcttttagtccaccaacattgccgggtaatttccttattgcagga
tcgtgggcaaatgatgttcgttgttgggaagtccaggataatgggcagactattccaaag
gcacagcagatgcacacagggcctgtcttagatgtttgttggagtgatgatgggagtaaa
gtgtttacagcctcttgtgataaaactgccaagatgtgggacctcaatagtaaccaagca
atacagattgcacagcatgaagctcctgttaagactatccattggattaaagcaccaaat
tatacctgcgtaatgaccggaagctgggataaaacactaatgttctgggatacacgatca
ccaaccccaatgatgacgctgcagttgcccgagcggtgttactgtgcagatgtggtgtac
cccatggcggctgttgctactgcggagaggggtttgatagtttatcagttagagaatcag
ccatcggagtttagaaggatagaatctccacttaaacatcagcatcgctgtgtggcgatt
tttaaagacaaagtgaacaagccaactgggtttgcccttggaagtatcgaaggaagagta
gccattcactacattaacccaccgaaccctgccaaagacaacttcacattcaagtgtcac
cgttctaatggcacaaacacatctgcacctcaggatatctatgctgtaaatggaattgct
tttcatcccgtccacggcactcttgcaaccgtaggatctgatggtagattcagcttttgg
gataaggatgcccggaccaagctaaaaacctcagagcagctggaccagccaatatctgcc
tgctgcttcaaccataatggcaatatttttgcatacgcttccagttacgactggtcaaag
ggccacgagttctacaacccacagaagaagaactacatttttctgcgcaacgccgctgaa
gaattaaagcccagaaacaagaagtattaa

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