Sphaerodactylus townsendi (Townsend's least gecko): 125433171
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Entry
125433171 CDS
T08213
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03250
Viral life cycle - HIV-1
stow04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125433171 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125433171 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125433171 (SAMHD1)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125433171 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
125433171
NCBI-ProteinID:
XP_048353551
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Position
LG05:100516128..100543378
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AA seq
635 aa
AA seq
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MQNSSQEGVSKRARPDSPADGYCTPEKRVSAYPGKDPSHLHPRHWDTEQLCLFLRRRGFD
DPEVLRRFREDQITGSVLPYVTESYLENMGIRNLPWRKRLLHCLRKLEQTHTDIMKVFND
PVHGHIEIHPLLIRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGHLAGCLVR
ALQERQPELDISHRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLANPESTWKHEQASVEM
FDYLIASNDLGPHMEFYGLCLPEDIEFIKEQIGGPTKTDDCSWPYRGRSEEKSFLYEIVA
NKRNGIDVDKWDYFARDCHHLGIQNNFDYGRFIKFARVCVVDGKKHICTRDKEAGNLYDM
FHTRNCLHRRAYQHKVGNIIETMITDAFLKADKYIKIKGFEGKEYHLSTAIEDMKAYTKL
TDDIFLTILHSDLPELHEAQEILRKIERRDLYKYLGETQPLEGREIKKEQYDKLPAEVAN
SKPKVANSKPEVANQDVELKAEDFIVDVINMDYGMQEENPINNVHFYCKSDISKAVKITK
EQVSKFLPEKFAEQLIRVYCKKTDSKSIEVAGKYFVQWCINKDFNKPRDGDVIAPELTPL
KWNPDQNDTKQHSVQHKRASKTLFPTEHLQPHSSN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactccagtcaggagggcgtctccaagcgggcccggcccgacagcccggccgat
gggtattgcactcccgagaaacgggtctctgcctatcccggtaaggatcccagccacctg
caccctcgccactgggacaccgagcagctgtgcctcttcctccgccgcagaggctttgac
gacccggaggtactgcgccgcttccgagaagatcaaataactggttcagtactgccctat
gtcactgaatcttatctggaaaacatgggaatcagaaatctgccctggagaaaacgactt
ctgcactgtttgcgcaagctggaacaaactcatactgacataatgaaggtatttaatgat
ccagttcatggccatattgaaatacatcctctcctcattcgaatcattgatacaccccag
ttccagcgtctacgatacattaaacagttgggtggcacttactatgttttccctggagca
tcacacaatcgctttgaacattccctcggggttggccatcttgcaggctgcttggtccga
gcgctgcaggaacgacaaccagagctggatatcagccacagggatattttatgtgtccaa
attgctggcctttgtcatgatctgggtcatgggccattctcacatatgtttgatggaaga
ttcatcccacttgcgaatccagaatccacatggaagcatgaacaggcttctgtggagatg
tttgactacttgattgcttccaatgacctgggaccacatatggagttttatggtctctgt
ttgcctgaagatatagagtttatcaaagaacaaataggaggacccacaaaaactgatgac
tgttcatggccttaccgtggacgatcggaagagaagagtttcctttatgagattgtggcc
aacaaaagaaatggcatcgatgtagataaatgggattactttgcaagggattgtcatcat
cttggaatccagaataattttgattatggacgcttcattaaatttgctcgggtctgtgta
gtcgatggaaagaagcatatttgtacccgtgataaggaagctggaaatttatatgacatg
tttcacacccgaaactgcctgcaccgcagagcctatcagcacaaagttggcaacataatt
gaaaccatgattacagatgctttcttaaaagctgataagtatataaagatcaagggcttc
gaaggaaaagaataccatctctctacagcgatagaggatatgaaagcttatactaagcta
acagatgacatttttctgacaattctgcattctgatctcccggagctgcatgaagcacag
gaaattttgcgtaaaatagaacgccgcgatctctacaagtacctaggagagactcaacct
ctagagggcagggaaatcaaaaaggagcagtatgacaagttgcctgctgaagttgctaat
tctaagcctaaagttgctaattctaagcctgaagttgctaatcaagatgttgaattgaag
gctgaagacttcatagttgatgttatcaacatggattatggaatgcaagaggaaaatcct
atcaataatgttcatttctactgcaagtctgatatcagtaaggcagtcaaaattactaaa
gaacaagtatcaaagttcctgccagagaaatttgctgaacagttaatcagggtttactgt
aagaaaacagatagcaagagtattgaagttgccggaaaatatttcgttcagtggtgcata
aacaaggatttcaataaaccacgggatggtgatgtgattgcccctgaacttactccattg
aaatggaatccggatcaaaatgacacaaagcagcattcggtgcagcacaagagagcttca
aaaactctctttcctactgagcatcttcagcctcattccagtaactaa
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