KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125433397
Entry
125433397         CDS       T08213                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018  RNA degradation
stow03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125433397
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125433397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stow03019]
    125433397
   03041 Spliceosome [BR:stow03041]
    125433397
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125433397
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125433397
Spliceosome [BR:stow03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125433397
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 125433397
NCBI-ProteinID: XP_048353856
LinkDB
Position
LG05:complement(118846309..118846608)
AA seq 99 aa
MTSTLENYINCTVAVITSDGQTTVGTLKGFDQPINLIVDESHERMFSSSQGVEQVVLGLY
IIRGDNVAVIGEIDEETGFAIDLGNIQVEPLNSLVHRRK
NT seq 300 nt   +upstreamnt  +downstreamnt
atgacatccactctggaaaactacattaattgtactgttgcagtaattacttcagatggt
caaacgacagtgggaactctcaaaggttttgatcagcccatcaacctgattgtggatgaa
agccatgaaagaatgttcagttcttcacaaggagtagaacaagtggttttaggattgtac
atcataagaggagacaatgttgctgtaattggagaaattgatgaagagacaggctttgct
attgacttgggaaacattcaagtggaacctttgaattcacttgttcacagaagaaaataa

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