Sphaerodactylus townsendi (Townsend's least gecko): 125433553
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Entry
125433553 CDS
T08213
Name
(RefSeq) tripartite motif-containing protein 54-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125433553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125433553
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125433553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_6
Sina_RING
Motif
Other DBs
NCBI-GeneID:
125433553
NCBI-ProteinID:
XP_048354121
LinkDB
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Position
LG05:complement(132220603..132255127)
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AA seq
531 aa
AA seq
DB search
MSSHMEYSSCPMDYPTMDSLERQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQSRGT
TLGSAGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQASARGPDRPLLKTEHPTC
EEHEDEKINIYCVTCGVPTCSLCKVFGEHKECEVAPLSDIYMKQKAALTDGIGALVAAND
RIQAYVNTLQGTCKNIEDNCKTQKQALCEKFDRMCVILEERRKIMLQRITYEQEEKTQHL
KSRSKACSDHIESSSKLVDTSLQSMEEPQMAVFVQNANVLIRKISEMSRSCKLDPLESGY
DNMEHYTVDFNAEERVLYQLDFIKEEEPEPTSEEDGACGETEDPPTDSGAGPGERREDLE
DFLAFGKEEQPPGVNLMPSEDLSSSAGGAEEKMVPLSAPSGAEGQVDRESTSWNSQQKEL
GRELHFCDPPTPLAEGALKSNVLVDVGQPKEEGVATEGFSTTDSSAEASGDGGVLDCSGD
SGAGNAFLLSGVAAAGGQGPAPDPVADGGTTEEIIEPLLSSWFNPTLWLRD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccatatggaatacagttcgtgcccgatggactatcccaccatggacagcctg
gagaggcagctcatctgccccatttgcttagagatgttcaccaagcccgtggtcatcctg
ccgtgccaacataacctgtgcaggaaatgcgccaacgacatctttcagtctcgggggaca
accttggggtctgcagggaggtttcgctgcccgtcctgccgccacgaagtggtcctggac
cggcacggcatctacgggctgcaacggaatctcctggttgagaacatcatagacatctac
aagcaggcatccgcgagggggcccgacaggcctctgttaaaaacggagcatccgacctgc
gaagaacacgaggacgagaaaatcaacatctactgcgtgacgtgcggggtgcccacctgt
tccctctgcaaggtttttggggagcacaaggaatgtgaggtggcccctctctcagatatc
tacatgaaacagaaggccgcgctgaccgatgggatcggggctctcgtggctgccaatgac
aggatccaagcctacgtcaacactttgcaaggcacgtgcaaaaacattgaggacaattgc
aaaactcagaagcaggccctgtgcgagaagtttgaccggatgtgcgtcattttggaagag
aggcggaagatcatgttgcagaggatcacgtacgagcaggaggagaaaactcagcatctg
aaatcccgctccaaagcctgcagcgaccacatcgaatcgtcctccaagctggtggacacg
tctctgcaatcgatggaggagccccagatggctgtttttgtgcagaacgccaatgtcctc
atccgcaagatttcagaaatgtcccggagctgcaagctcgaccctttggaatcaggttat
gacaacatggagcactacacggtcgatttcaacgcagaggaacgcgtcctgtaccagctg
gatttcatcaaagaagaggagcctgaaccgacaagcgaggaagacggagcctgcggggag
acggaagaccccccaacagactccggggcagggcctggcgagagaagagaagacctggaa
gacttcttggcctttggcaaggaggagcagcccccaggagtgaatcttatgccgagcgag
gacctgagcagttctgctggtggagcagaagaaaagatggtgcccctgtcagctccgtcc
ggggccgaaggccaggtggacagagaaagcacctcatggaactctcagcagaaagagctg
ggcagagagctccatttctgtgatcccccaacacctttggcggagggagccttgaagagt
aacgttctggtggacgtggggcagcccaaagaggaaggtgtggccacagaagggttcagc
accacggacagctcagcagaggctagtggcgatggaggcgtcttggattgcagcggagac
agcggagctggaaatgcttttcttctgagcggagtggcggctgccggtggccagggtcca
gctcccgatcccgtcgctgatggagggacgaccgaagagatcatcgagccgcttctgagc
agctggttcaatcccaccctttggctgcgtgattga
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