Sphaerodactylus townsendi (Townsend's least gecko): 125433895
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Entry
125433895 CDS
T08213
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49 isoform X1
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stow03009
]
125433895 (DDX49)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125433895 (DDX49)
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
90S particles
Helicases
125433895 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
125433895
NCBI-ProteinID:
XP_048354777
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All DBs
Position
LG05:12765231..12782873
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AA seq
479 aa
AA seq
DB search
MAAFRALGLAPWLTAQAEQLGLSRPTPVQEACIPPTLQGRDCMGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFSLQKIKFLVLDEADRLLEQGCTDFTHDLEVILAAVPTAR
QTLLFSATLTDTLTELKQVAMNKPFFWESPSEVRTVEELDQRYLLVPEKVKDAYLVHLVQ
TFQDEHEDWSIIIFTNTCKNCQVLNMMLKKFNFPSVALHSMMKQKQRFAALAKFKSSVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRHGVAITLVTQYDIHLV
HAIEDQIKMKLQEFSVEERSVLNILTQVNVVRRECEIRLEGTDFDEKKEINKRKQMILEG
KDPDLEEQRKAELAKIRKKNTEFRSRVQQTLQEKQQLKLRRKLQKKMQRQQKRPPVAAK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtttcgtgcgctcggcctggcgccctggttgacagcccaagcagagcagctc
ggcctgtcgaggcctacgccggtccaagaagcctgtatccctcctactctccaaggtcgt
gactgcatgggatgtgccaagacggggagtgggaagacagctgcgtttgtcctaccgatc
ttgcaaaaactctcagaagatccctatggtattttttgcctggtccttacgccaacgaga
gaattggcttaccagatagctgaacagttccgagtcctcgggaagccgctgggcttaaag
gattgcataattgttggtggaatggacatggtggcccaagccctggagctttctcggaag
cctcatgtggtcattgctacccctggccgactggccgatcacctccggagttccaacacc
ttcagccttcaaaagatcaagtttttggtcctggacgaagctgaccgtctcctggagcag
ggctgcactgacttcacccacgacctggaagtgattctggcggctgtgcccactgccagg
cagactctcctcttcagcgccacgctgaccgacacgttgaccgagctcaagcaggttgcc
atgaataagcctttcttctgggagtctccatcagaagtgcggacagtggaagagctggac
cagcgctacctgctggtgccggagaaggtcaaagatgcctacctcgttcacctggtccaa
acattccaggatgaacacgaggactggtccataatcatcttcaccaatacctgcaagaat
tgccaggttttgaacatgatgctgaagaaattcaacttcccctcggtggctctgcattca
atgatgaagcagaaacaacgcttcgccgctctggccaagttcaaatccagcgtctacaag
atcctcatagcgaccgacgtggctgccagaggactcgatatcccaacagtccaggttgtc
atcaaccacaacacccctggactccccaaaatctacatccaccgagtaggccggactgcc
cgtgcaggtcggcacggcgtggccatcacccttgtgacgcagtacgacattcatctggtc
cacgcgatcgaggaccagatcaaaatgaagcttcaggagttctccgtagaggaacggtcc
gtgctgaacatcctcacccaagtgaatgtggtccggcgcgagtgtgagattagattagaa
ggaacagatttcgatgagaagaaggaaatcaacaagcggaagcagatgatcctcgaagga
aaggatccggacctggaagagcagcggaaggctgagctggccaagatcaggaagaaaaac
accgagttccgcagcagagtccagcagacgttgcaggagaagcagcagctgaagctgcgg
cggaagctgcagaagaaaatgcagcggcagcagaagcgaccaccggtagcagccaagtga
DBGET
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