Sphaerodactylus townsendi (Townsend's least gecko): 125433964
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Entry
125433964 CDS
T08213
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125433964 (MSH4)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125433964 (MSH4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_28
ATPase_2
KH_KRR1_1st
AAA_30
Motif
Other DBs
NCBI-GeneID:
125433964
NCBI-ProteinID:
XP_048354888
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All DBs
Position
LG05:complement(53970045..54017979)
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AA seq
932 aa
AA seq
DB search
MPDANNGARGSQLMEEAAAASTSYSGHCSSSSGAEHLPCYQFGLQQTPGGDLLRSSSNDC
PVGPQKGRGFSGVFTPTLLPRRTEDSYFGDKSSHTENVSTVNLTSPSSTRGLNNARTGKT
PFSSNRSGHRNWTPFRGYSVTSSSSISVHNAASVIVAVIEGRGLARGEVGMASVDLKNPE
VVLSQFADNTTYAKVITKLRILTPLEIIMSNTACDAGNATKLFSLITENFKNVTFTTVQR
KYFSESKGLEYIEQLCTPEFSTVLMEIQSKYYCLAAVAAVLKYVEFIQNSVYAPKSLKIR
FHGSEQTAMIDSTSALNLELITNNRDPRNGHTLFGVLNYTKTPGGSRRLRSNILEPLIDA
DTINTRLDSVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNASESKITNLI
YLKHTLELVEPLKDALKSYMTPLLKAYCSSLEDNRFGIILEKIKTVINDDTRYTKGCLNM
RTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPLKTSFSSARGFFIQMN
ADCPAIHSGLLPAEFTKITKVKNVYSFTSPDLMKMNERCQESLREIYHMTYLIVCKLLSE
IYEHIHCLYKLSDTVSMLDMLQSFAHACTLSDYVRPEFTDTLAVKQGWHPVLEKLSFEKP
VPNNTYITEGSNFIIITGPNMSGKSTYLKQIALSQIMAQIGSFVPAEYASFRIAEQIFTR
VGMDDDLETNSSTFMKEMKEISYIIQNANDRSLIIIDELGRGTSTEEGIGICYAVCEYLL
KLKAFTLFATHFLELCHIDILYPNVENNYFEVQHVRRNTGDMERIAYTYILSKGQTEEKN
YGIKAAELSSIPPSIILDAREIVTLIARQILQQQSTPETLKERAIHHLGSRLVQTARNSR
LDQGTLRIYLKGLKKKYEAECIISEQVATKNQ
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcaaataacggcgctcgaggaagtcagttaatggaggaagccgcagcagcg
tccacttcttattcgggccattgctcgtcttcgtctggggcggagcacctgccttgttat
cagttcgggttgcaacagaccccgggtggcgacctcctgcgctcttcctcgaacgattgt
ccggttggtccccagaaaggccggggctttagcggtgtttttactccgaccttactcccg
aggaggaccgaagattcatactttggagacaaaagttctcatacagaaaatgttagcaca
gtcaatttgacaagtccttcttcaactagaggtttaaataatgcacggacaggaaaaaca
ccattctcttctaatagatcggggcatagaaattggactcctttcagaggatattcagtt
acatcatcatcatcgatatcagttcataatgctgcatccgttattgtagctgtaatagaa
gggagaggtcttgctagaggtgaagtgggaatggcaagtgttgacttaaaaaatcctgag
gtggtgctgtctcagtttgcagacaatacaacatatgccaaggttatcacaaaactcaga
attttaacacccttagaaataataatgtcaaacactgcatgtgatgcaggaaatgcaaca
aaattgttcagcttgataacagaaaatttcaagaatgtgacttttactacagtgcaaaga
aaatacttcagtgaaagtaaaggcttggaatacattgaacaactgtgtacccctgaattc
agtactgtccttatggaaattcagtctaagtattactgcttggcagctgttgcagctgtg
ctgaaatatgttgagtttattcaaaattctgtttatgctcctaagtcacttaagattcgt
tttcatggaagtgagcaaacagcaatgattgactccacatcagccttgaatcttgagtta
ataactaacaacagagatcctaggaatggtcatactctttttggcgttctaaattatact
aaaacaccaggtggaagtcgaagacttaggtctaatattctagagcctcttattgatgct
gatacgattaacaccagactggattctgtccaggagctcctccaggatgaggaactcttt
tttggccttcagtcagttatttcaagattcctggacactgaacaactactttcagtttta
gtacaaattccaaaacaggatacggttaatgcctctgaatcaaaaataacaaatttaatc
tatctgaagcatactttggagcttgtagagcctcttaaggatgctctaaaaagctacatg
acaccgttattaaaggcttactgtagttctctggaagacaataggtttggaatcattctt
gaaaagattaaaaccgtcattaatgatgatacaagatatacaaaagggtgcttgaatatg
agaactcagaagtgctatgcagtgaagcctaatatcaatgaattccttgacatagcacga
agaacatatactgaaattgtggatgatatagcaggaatgataacacagcttgcagaaaaa
tacaaccttcctttgaaaacaagttttagttcagctcggggattttttattcagatgaat
gctgactgcccagccatacacagtggtctgcttcctgcagaatttactaagattactaaa
gtaaaaaatgtatatagttttacttcaccagatttaatgaaaatgaatgaaagatgccag
gaatccttgagagaaatttatcacatgacatacttgatagtgtgtaaactactgagtgaa
atctatgagcatattcattgcctttacaaactgtctgatacagtgtctatgctagatatg
ttgcagtcatttgcccatgcatgcacactctctgattatgtgcgcccagaatttacagac
accttagcagtaaaacaagggtggcatcctgttctagaaaaattatcatttgagaaacct
gtacctaacaatacgtatattacagagggaagtaattttatcataattaccggaccaaat
atgagtggcaagtcaacttatctaaaacagatagccctctctcaaattatggcacaaatt
ggatcttttgttccagcagaatatgcttcttttagaattgctgagcagatatttactaga
gtaggtatggatgatgatttagaaacaaattcatcaacattcatgaaggaaatgaaagag
atatcatatatcatacaaaatgctaatgacagatcacttatcataattgatgaacttggc
agaggcaccagtactgaagaaggcattggcatatgttatgcagtctgtgaatatcttctg
aaattaaaggcatttacgctgtttgctactcatttcttggaattatgtcatattgatatc
ttatatcccaatgtggaaaacaactactttgaagtgcagcatgtgagaaggaatactgga
gatatggagagaattgcttatacttatattctttcaaaaggacaaacagaggaaaagaat
tatgggataaaagctgcagagctctcctctattccaccatcaataatattggatgcaagg
gagattgtaacacttattgctagacaaattttgcagcagcaaagtactccagaaacatta
aaggaacgggctatacatcacttgggaagtagactggtacagactgcacgcaattcccga
ttggatcaaggcaccttgcgaatatacctgaagggactgaagaaaaagtatgaggctgag
tgcattatttctgaacaagtagctactaaaaaccagtag
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