Sphaerodactylus townsendi (Townsend's least gecko): 125434041
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Entry
125434041 CDS
T08213
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03018
RNA degradation
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125434041 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
125434041 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125434041 (LSM7)
03041 Spliceosome [BR:
stow03041
]
125434041 (LSM7)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125434041 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
125434041 (LSM7)
Spliceosome [BR:
stow03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125434041 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
125434041
NCBI-ProteinID:
XP_048355043
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All DBs
Position
LG05:20680996..20685882
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AA seq
109 aa
AA seq
DB search
MPVESKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEY
MRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggaaagcaagatggcggacaaagaaaagaagaagaaagagagcatcttggac
ctttccaagtacattgacaaaaccatccgtgtcaaattccaaggtggtcgggaagctagc
ggtgtcttgaagggatttgacccccttctcaacctcgtgttggatggtaccatcgagtac
atgagagatccagatgaccaatacaaactcacggaggacacccgtcagctgggactggta
gtctgccgaggcacatctgtagttcttatttgtcctcaggatgggatggaagccattcca
aacccgtttatccagcagcaggacggctag
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