Sphaerodactylus townsendi (Townsend's least gecko): 125434200
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Entry
125434200 CDS
T08213
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125434200 (CACNA1I)
04020 Calcium signaling pathway
125434200 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stow04040
]
125434200 (CACNA1I)
Ion channels [BR:
stow04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125434200 (CACNA1I)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125434200
NCBI-ProteinID:
XP_048355188
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Position
LG06:39988790..40197212
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AA seq
2078 aa
AA seq
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MMVILLNCVTLGMYQPCDDMDCLSNRCQILQVFDDFIFIFFAMEMVLKMVALGIFGKKCY
LGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFRDENLTIQGNITLPPYYQPEEEDEK
PFICSLSGDNGIMGCHEIPPLKERGHQCCLDKDDYFYYISVRQEFNVSGMCVNWNQYYNE
CRTGNSNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYVCHI
VRKAKRRTLGFYNSLQDRRLGRTPPTTVKRRMSRKNQRQYRRCRKHNSVDYMPPTLGQPI
AMSVTSDPSNCPSCHKTQQEAARRLSVLDSADSDQEEGGEASDEDGDGRKGSEGAADLEK
EEEDGEEGRQLTHCGYVWQEVRFKLRGIVESKYFNRGIMIAILVNTISMGIEHHEQPEEL
TNILEICNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQADGGLS
VLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKF
SLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTF
GNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNIEEFDKCLDSLDPKLCAVPMTPNG
HLDPSIPCLNQPGAAAGIIHPSRHTLQPEQVLVALESRKSSVMSLSSSRSSHYGAWGRSG
GWGSRRSSWNSLARGHSLKHKPPSAEHESLLSGERHRTSEGEREGLVRVRHHRRTLSLDT
KGSSDLVELAPSGPPNHRASRRIGVTTGPTEHQNCNGKMPAITKDIFPEMNNRKDHGEDE
EEIDYSLCFRIKKMIEAYKPDWCELREDWSIYLFSPQNRFRILCQTIIAHKLFDYIVLAF
IFLNCITIALERPQIEQRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGEQAYLRSS
WNILDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETL
ISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFFHCLGVDIRNITNRSDCMAANYKWVHH
KYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWMLLYFISFLLIVS
FFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCSVRLL
IHSVCTSHYLDIFITFIICLNVVTMSLEHYNQPMSLETALKYCNYMFTAVFVLEAVLKLV
AFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLL
KMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDEHPCEGMSRHA
TFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDDRSCLSNLQFISPLYFVSFVLTAQF
VLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLCPCGSSSPGSGQDGGGGRVDP
EGHLCMTCYSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFHHYSSPAMCEKCNHDK
QEVQLAEMEGLSLNSDKSSILLGDDEDNHSVDQLSPKETQDGLDSTNSLGMEDLEECLLS
LADPEASPAPESYLCEMEETAFSPVQSWLKNEGNQGPTTPFSSDTSNPLLPVPAEFFQPV
VSAKRPAQEKASCPENLPKISLQASWVSLQSPSVNCSLIHQTTESDTSLDDSRSNSSEGS
LQTTLEDSLNLSDSPQCTLDLPVTLCPVPAAATQRALVAPLSPASRRQSLRGRGIFTLQN
IRRHQRSHSSGGSTSPGCTYHDSMDPSDEEGAGNSLRGGGTNNDHSDTLSSLSLTSLFSP
PPPPQGLALMKKCNSTSSLHANPSSRGSAGTEAKQFYSVDPRGFLSMPSWVTDFCKNSPS
PREDEVPDLDSDSLVTVDHSSPAPPELELGSGVSKRNR
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatcctgttgaactgtgtgacccttgggatgtaccagccctgcgatgatatg
gactgcctttccaacagatgtcaaattttgcaggtatttgatgacttcattttcatcttc
tttgctatggagatggtgctgaaaatggtggcgttaggtatctttggcaagaaatgctac
cttggagacacctggaaccgcctggatttcttcattgtcatggctgggatggtggaatat
tctctggatctccaaaacattaacttgtctgcaatccgcactgtacgcgttctgagaccc
ctcaaagctatcaaccgtgtgcctagtatgcggatcctggtgaatttgctgctggacacc
ttgcccatgctggggaatgttctgcttctctgcttttttgtcttcttcatctttggcatc
attggagtacagttgtgggctggactgctgagaaaccgatgtttcagggatgagaactta
acaatacaaggtaacatcacccttcctccctactatcaacctgaggaggaggatgaaaag
cccttcatctgttcactgtcaggagataatggtatcatggggtgccatgagattcctcca
ctgaaggagcggggacatcaatgctgtttggacaaggatgactatttctactacatctct
gtgaggcaggagttcaacgtcagcggcatgtgtgtcaactggaaccaatattacaacgag
tgcagaacaggcaattctaatccacacaaaggggctataaattttgacaatattggctat
gcatggattgttatatttcaggtgattacactggaagggtgggtggagattatgtactat
gtgatggatgctcattcattctacaacttcatctatttcatccttctgatcattgtgggc
tcattctttatgatcaacctatgcctggtggtcattgccacgcagttttcagagacaaag
cagcgggagcaccagctgatgcaagagcaaagagcacggtacctgtcctctagcactgtc
gccagctacatggaaccaggagactgctatgaggagatcttccagtacgtctgccatatt
gtgcgcaaagccaagcgccgtactcttggcttctacaacagcctgcaggatcgacgccta
ggccgaacaccaccaactactgtcaagcggaggatgagtaggaaaaatcagaggcaatac
aggcgttgccggaaacacaattctgttgattacatgccaccaactcttggtcagcctatt
gccatgtcagtgacctctgatcccagcaattgtccaagctgtcacaagacccaacaggaa
gcagcccgaagactttctgtgctggatagtgccgattcagatcaggaggaaggaggggaa
gccagtgatgaagatggagatgggaggaagggaagtgagggggctgcagacctggagaag
gaagaggaagatggagaagaaggcagacaactgacacattgtggttatgtgtggcaagaa
gtgaggttcaagctgaggggaattgtggaaagcaagtacttcaaccgtgggatcatgatc
gccatccttgtgaacaccatcagcatgggtattgagcaccatgaacagcctgaagaacta
accaacattttggagatctgcaatgtggtgtttaccagcatgtttgccctggagatgatc
ttgaaacttgctgcctttggactctttgattatctccgcaacccttacaacatctttgac
agcattatcgtcatcatcagtatctgggagatcatcggtcaggcagatggaggcttgtca
gtgctgaggacatttcggctgcttagggtgctgaaactggtgagattcatgcctgccttg
cggcgtcagctagtcgtgctaatgaagaccatggacaacgtggctactttctgcatgctt
ctcatgttgtttatctttatattcagcatcctgggaatgcacatctttggatgtaaattc
agcctcaggacagacacaggagacacagttccagatcggaagaattttgactctctgctt
tgggccattgtcactgtgttccagatactcactcaggaggactggaacgttgttctgtat
aatggcatggcctcaacttccccttgggcatccctttattttgtggctctcatgacattt
ggcaactatgttctcttcaatctgctggtggccatcctagtggagggattccaggctgag
ggcgatgctaaccggtcgtattcagatgaggatcagagttcgtcaaacatagaggagttt
gacaagtgcctggacagcttggatccaaagctctgtgcagttcctatgaccccaaatgga
catcttgaccccagcattccttgtctcaaccaacctggggcagctgctggaattattcat
ccttcccgccatactctgcagccagagcaagttcttgttgcccttgaatccaggaaaagc
agcgtgatgtctctgtctagctctcgtagttctcactatggagcatggggccggagcggg
ggctggggcagccggcgctccagctggaacagccttgcaagaggccacagtctcaaacac
aagcctccttcagctgagcatgagtcactcttatctggggaaaggcaccggacctctgag
ggagaacgagaaggtctggtcagagtgcgacaccatcgacggacactctccctagatact
aaaggctcctctgatctggttgagttggcaccatctggcccacccaatcacagggcgtca
cggaggataggtgtgaccacagggcctactgagcatcagaactgtaatggtaaaatgcca
gctatcacaaaggacatcttcccagaaatgaacaatcgcaaggaccatggagaagatgag
gaggagatagactatagcctatgtttccgcatcaaaaagatgatagaggcttacaagcca
gactggtgtgaattacgggaggactggtcaatctacctcttctcaccacaaaacaggttc
cgcatcctctgccaaactattattgctcataaactctttgattacatcgtcttggccttc
atcttcctgaattgcatcactattgccctggagagacctcagattgaacagaggagtaca
gagagaatctttcttacagtttctaattacatcttcacagcaatctttgttgctgaaatg
acattgaaggtagtctcccttggcctatattttggggaacaggcctatctccggagcagt
tggaatattctggatggcttcttggtgtttgtgtctatcattgacatcgtagtttcagtg
gcctctgctggtggagccaaaattttgggggttctacgagttctccgactactgcgtact
ttacgcccactcagggtcataagccgcgcaccgggcctcaagctggtcgttgagacgcta
atttcttccctcaagcctattgggaacattgtcctcatttgctgtgctttcttcatcatc
tttggcattcttggggtgcagctctttaaggggaagttcttccattgcctcggtgtggat
atccgaaacatcaccaacaggtcggactgcatggctgccaattacaagtgggtacatcac
aaatacaacttcgacaatctgggccaggctttgatgtccctgtttgtgctggcttccaaa
gacggctgggtcaacattatgtacaatggactggatgctgttgctgttgaccagcagcct
gtgaccaacaataacccttggatgctcctctacttcatttcctttttgctcatcgtcagc
tttttcgtgctcaacatgttcgtgggagtggttgtggagaactttcacaaatgtagacag
catcaagaggcagaggaggcccgccgtcgagaggagaaacggctgagacgcctggagaag
aagcgtaggaaagcacagcgcttgccgtattatgccacctactgttctgtccgccttctc
atccattcagtctgcaccagccactacttggacatcttcatcaccttcatcatttgcctc
aacgtcgtcaccatgtccctggagcactacaaccagccaatgtctctggagactgccctc
aagtactgcaactacatgttcactgcagtctttgtgttggaggccgttctgaagcttgtg
gcctttgggctgagacgtttcttcaaagacaggtggaaccaactggacctggccattgtt
ctgctctcagtcatgggcatcactctggaagagattgaaatcaacgctgcccttcccatc
aaccccaccatcattcgcatcatgagagtgctgcgcattgcccgagtcctgaagctgttg
aagatggcgaccgggatgcgggccttgctagacacagttgtgcaagcgctgccacaggtg
ggaaaccttggcttgctgttcatgctcctgtttttcatctatgctgccctcggagtggag
ctctttggaaagcttgtatgcaatgatgagcacccctgtgagggaatgagtcggcatgct
acctttgagaactttgggatggctttcctcacgctatttcaggtctccacaggtgacaac
tggaatggaattatgaaggacacccttcgtgactgcacccatgatgaccggagttgtctc
agcaatctgcagttcatctcaccactgtactttgtgagttttgtgctcacggcccagttt
gtcctcatcaatgtagtagtagctgtactcatgaagcacctagatgacagcaacaaggaa
gcacaggaggacgccgaaatggatgctgagattgagcttgagatggcccatgggctgtgc
ccatgtggctctagctcgccaggctccggacaagatggaggaggtggaagagtggaccct
gaaggacacctatgcatgacgtgttactctcctgcacaggagaacttatggctggacagt
gtctctttaattattaaggactccttcgacggggagttaatgatcatcgataacctatcg
ggctccgtcttccatcattactcctcgccggccatgtgcgagaagtgtaaccatgacaag
caagaggtccagttggctgaaatggaaggcttatcactgaactctgataagtcttctatc
ctgctaggggatgatgaagacaaccacagcgttgatcagctgagccctaaggaaactcag
gatggtctggacagtaccaactccctggggatggaagatttggaggaatgtctcctatcc
ttggcagacccagaagcttctccagctccagaaagttatttatgtgaaatggaagaaact
gcctttagtccagtccagtcttggctgaagaatgagggcaaccaaggtcctactaccccc
ttctcttcagatacaagcaatcctctgttaccagttccagcagagtttttccaaccagtt
gtctctgccaaacgaccagctcaggagaaagcttcctgcccagagaatctccctaaaatc
tctctgcaggcttcttgggtatcactgcaatctccaagtgtgaactgctcacttatccac
cagaccactgagagtgatacctccctggatgacagcaggagcaacagctcagagggcagc
ttgcagaccacactggaggacagcttaaacctcagtgactcgccccaatgcacactggac
ctcccagtaacactgtgcccagtgccagcagccgccacccaaagagctttagtggcacca
ctttcccctgcctctcgaaggcagagcttgaggggtcgagggattttcactctccagaac
atcaggcggcaccaacggagccacagcagtggtgggagcaccagccctggttgcacttac
catgactccatggacccttctgatgaggaaggtgctgggaacagcttaaggggtggaggc
accaacaatgaccattcggatactctcagcagtctctctctcacttccctcttctcgcct
ccccctccaccccaaggtctggcactcatgaagaagtgcaacagcaccagcagtcttcat
gccaatccttcttcccggggttctgcaggaactgaagctaagcagttctactcggttgac
ccaagagggtttctctccatgccttcatgggtgacggacttctgcaagaacagcccttct
ccaagggaggacgaggtgccagacctggactcagacagccttgtgactgtggatcacagc
tccccagctcctcccgagttggaactgggaagtggggttagcaagaggaacagatga
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