Sphaerodactylus townsendi (Townsend's least gecko): 125434311
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Entry
125434311 CDS
T08213
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125434311 (SOX5)
Transcription factors [BR:
stow03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125434311 (SOX5)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
125434311
NCBI-ProteinID:
XP_048355474
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Position
LG06:12398482..13032448
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AA seq
774 aa
AA seq
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MLTDPDLPPEFERMSSKRPASPYGEADGEVAMVTGRQKGEEEESEGLQAFHLPLHVTFPN
KSHSEEFQPISLLTQETCGHRTPTSQQNTLEVDGNKVMSSFAPHNSSTSPSKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFL
LPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKMPG
IPQSNLGAAVSPTSIHTDKSTNSPPPKSKDDAAQPLNLSAKTKMSESKSPTSPTSPHMPA
LRINSGSSSLKSSVPATLASPSARVNTIDILSSITSSGYLNDHDAVTKAIQEARQMKEQL
RREQQVLDGKVAVANNLGLNNCRTDKDKTTLENLTQQLAVKQNEDGKFSHAMMDFNMSGD
SDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKIL
GSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMR
NRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQ
STYGIKSEEHSHIKEEMQTDDVNGGMYDEYDEEEDDPDVDYGSDSENHITGQAN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgaccccgatttacccccggagtttgaaaggatgtcttccaaacgaccagcc
tctccatatggggaagcagatggagaggtagccatggtgacaggccgacagaaaggggaa
gaagaggagagcgaggggctccaagcctttcaccttcctttgcatgtgactttccccaac
aagtctcattccgaggaatttcagcccatttccctgctgacgcaagagacttgcggccat
aggacgcccacctcccaacaaaacacattggaagtcgatggcaataaagtgatgtcttcg
ttcgccccacacaactcatctacctcgccgtctaaagcagaagaaggtgggcgtcaaagt
ggagaatccttgtccagcacagctctgggaacccctgaaaggcgcaaaggcagcctcgca
gatgtggtggacaccctgaagcagaggaagatggaggagctgatcaaaaatgaaccagaa
gaaacccctagtattgaaaagctactatcaaaagattggaaagacaagctcctggccatg
ggatcagggaactttggagaaataaaagggactccagaaagcctggcggagaaagaacgg
cagctcatgggcatgatcaatcagctgaccagtttgcgggagcagctgctggccgctcac
gacgagcagaagaagttggctgcctcccagatcgagaagcagcgccagcaaatggagctg
gccaagcagcagcaagaacagattgcaagacagcagcagcaactcctgcaacagcaacac
aagattaaccttcttcagcaacagatccagcaggtccaaggtcagctgccgccattaatg
attccagtgttccctccagaccagcggactctcgccgcagctgcccagcaaggattcctc
ctccctccgggtttcagctacaaagcaggctgcagtgacccttaccccgttcagctgatc
ccgacaaccatggcagctgctgccgcggcaacccccggcttaggcccgctccaactgcag
cagttgtatgctgcccagcttgccgcaatgcaggtatccccaggaggaaagatgcccggc
atcccccaaagcaacctcggtgcagcggtctcgccaaccagcatccacacagacaagagc
acaaacagccctccgcccaaaagcaaggacgacgcggcccagccgctgaacctgtcggcg
aaaaccaagatgtcggaaagcaagtcgcccacgtcgcccacgtctcctcacatgccggcg
ctgcgaataaacagcgggagcagctccctgaaatcttcggtgccagcaacgttagccagc
ccttcggcccgagttaacacaatagatatcctttcctctatcacgtcgtcaggttactta
aatgaccacgatgctgttaccaaggcgatccaggaagcccggcagatgaaggagcagcta
cggagagagcaacaggtgcttgatggaaaggtggccgtcgcaaacaacctgggcctgaac
aactgcaggacagacaaggacaaaacgacactggagaacttgactcagcaattggcggtg
aaacagaacgaggacgggaagtttagccacgctatgatggatttcaacatgagcggagac
tctgacggaagtgctggggtctcagaatcccgaatttaccgggaatccagaggacgtggg
agcaacgagccgcacatcaagcgcccaatgaatgcctttatggtgtgggctaaagacgaa
cgacggaagatcctacaggccttccctgacatgcacaactccaacatcagcaaaatactg
ggatctcgctggaaagcgatgacgaacctcgagaagcagccgtactacgaggagcaggcc
cggctcagcaagcagcacttggagaaatacccagactacaagtacaagcccaggccgaag
cgcacctgcttagtggacgggaagaagctgcggatcggggaatacaaggcaatcatgcgc
aacaggcgccaggaaatgaggcagtacttcaatgtcggacagcaagcacagatccctata
gcgacagctggcgtcgtttacccgggagccatcgccatggcagggatgccttcgccgcac
ctgccctcggaacactcgagcgtgtcgagcagcccggagccggggatgcccgtcatccag
agcacttacggcatcaaaagtgaggagcactcccacatcaaagaggagatgcagaccgat
gacgtcaacggcgggatgtacgacgagtacgacgaagaagaggacgaccccgacgtggac
tatggcagtgacagtgaaaaccacattacaggacaagccaactga
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