Sphaerodactylus townsendi (Townsend's least gecko): 125434428
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Entry
125434428 CDS
T08213
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125434428 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125434428 (ARID1A)
03021 Transcription machinery [BR:
stow03021
]
125434428 (ARID1A)
03036 Chromosome and associated proteins [BR:
stow03036
]
125434428 (ARID1A)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Helix-turn-helix
ARID
125434428 (ARID1A)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125434428 (ARID1A)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125434428 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
125434428
NCBI-ProteinID:
XP_048355755
LinkDB
All DBs
Position
LG06:complement(108429888..108531769)
Genome browser
AA seq
2288 aa
AA seq
DB search
MAAQVAPAAAATSLGAPAPSDLKKAEPPRDCSSEEAGGEAAAEKQQQQQQPPSSESDGPP
GKELQDGAESNGGGAGAEADLKSPNGNPRPGGGGGGGGGASSLNNNLPEPPGSGSNSSDG
VGTPQPQQQPPQQQQQQPPQPPLPAPHPVALAPPAYGFGYGRGAQAAAAVAFHQHGGQQS
PGMAALQSGGLDQAYPGPTGAPPQNSHGGPATEHSFANHQYNSYYPAAGRSAYPPPPQAY
ALSSPRGSAQGPAQAGPKPPSAAFQQQQRFGALGPAAGGGPGGGATPQPTSTPTLNQLLT
SPSSARGYQAYPGTDYGTGPQDGAGGAANKAPAAAADLASQYGGATAGQGWGAAGAGGGQ
QRSHLAPMSPGSSGGGAGGGQPLSRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQSGQ
QQSHGYPGQPYGPQTPQRYPMAIQSRTQSAMGTVSYAQQIPPYGQQGPSGYGQPTQTPYY
NQQSPHPQQQPSYAQQSPSQTPHPQPSYQQQQTQSQPPQLQSSQPPYSQQPSQPPHQQSP
SPYPQQQSSAQQHPQSQPAYSQQQSQSPYQQQQQQQQQQQQQQQQTQQSVTSALSQQTAS
YPQSQSQQQSAYSQQRFPPPQEISQDSFGSQTSSAASMASSKGQEDVTLNLQSRPSSLPD
LSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVG
SPASVAQSRSGPLSPAAVPGTQMPSRPPSGQSDSILHPSMNQSTIAPDRGYIQRNPQMPP
YNSPQPGSALSPRQSSGGQMHAGMAPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMPNA
NYPNPGMGGSLNPMGAGSQIHGQTGVPPYPGLPPGRISHAAMGNRPYGPNMANMPPQVGT
GMCPPPGGMNPKAQQAAAAAMHAAATNSIQNRPSGYPNISQGGMMGTGPPYGQGINSMAG
MLNPQGPPYSMGGNMANNSAGMAASPEMMGLGDVKLTPAAKMNNKSDGTPKSESKSKKSS
SSTTTNEKITKLYELGGEPERKMWVDRYLSFTEEKAMGMTNLPAVGRKPLDLYRLYVSVK
EIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFS
TDSKKSQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIR
SNSVGLQDAFPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKGSD
PFMSSGQGPNTGMGDPYNRAAGPGISNMAMGQRQHYPYSPYERVRTEAGIGPEANLGSGT
PQPNIMPSTPDSGMYSPSRYPQQQQQRHDSYSNQFPTQGTSSGSPFPTQQTTLYQPQQQN
YKRPMDGNYGPPAKRHEGEMYSVSYSTGQGQVPQQLPPAQTQQPSQQPTAQPSPQQEMFN
QFGNTYSATDRRPGGPQNQFPFQFGRDRVSAPPGSSTQQSIPPQMMGGPVQSTPEGPQQG
SMWQGRNEMSYGYPNRQSPGSAPQGPAYHGVNRTDEMLHPDQRVNHEGPWPSHGNRQPPY
GPSAPVPPMTRPPQPNYQTPPSMQNHIPQVSSPAPLSRPVENRTSPSKSPFLHSGMKMQK
AGPPVPASHITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTTKDIGTPEAWRVMMS
LKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYE
VGDPGQRTLLDPEKVCKSSSPSPEEGEKDDPQSPNCAKEEEEEEEEEGEEEAAFTNKAVA
PLENTEEKLVSKFDKLPVKIVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQ
THFESKMELPLAHKRASCNSVPRKRLVAESNPVAQEGGPIPSDGPPEKRITATMDDMLSA
RPGALAEEEVRNVEVTKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSL
SKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQ
DQGVSCNKVEWWWDCLEILRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSA
EAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGTMVRFLSD
RKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLMH
MQNPPFEPTSMDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICD
VLFLIGQS
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtggcccccgccgcggccgccactagcctgggcgccccggccccgtcg
gacctgaagaaagccgagccgccgcgggattgctcgtcggaggaggccgggggcgaggcg
gcggcggagaagcagcagcagcaacagcagccgccgtcgtcggagagcgacggtcccccg
ggcaaagagctgcaggacggggccgagagcaatggcgggggcgcaggggccgaggccgac
ctgaagagccccaacgggaaccccaggcctggtggcggcggcggcggcggcggcggcgcc
tcttcgctgaacaataacctgccggagccgcccggcagcgggagcaacagcagcgacggg
gtgggcacgcctcagcctcagcagcagccgcctcagcagcagcagcagcagccgccccag
ccgccccttcccgctcctcacccggtcgccttggctccgccggcgtacggcttcgggtac
ggccgaggcgcccaggctgcggcggccgtcgccttccaccaacatggcggacaacaaagc
cctggcatggcagcgctgcagagcggggggctggatcaggcgtacccggggcccaccggg
gctcctccgcagaactcccacggcggccccgcgacggagcacagcttcgccaaccaccag
tataactcctactacccggcggccgggcgcagtgcctatccgcctccccctcaggcctac
gccctcagctcgcctcgggggagcgcgcagggccccgcgcaagccgggcctaagcctccc
tcggccgctttccagcagcagcagcgcttcggggccctggggccggcggccggaggagga
ccgggcggaggcgccaccccgcagcccacctcgacccccacgctcaaccaactgctgacc
tccccgagctcggcccgcggctaccaagcctaccccgggaccgactacggcaccgggccc
caagacggcgccgggggagccgccaacaaggccccggcggcggccgcggacttagcctcg
cagtacggcggcgccaccgccgggcagggctggggggccgccggagcaggaggaggccaa
caaaggagccacctggcgcccatgagcccgggcagcagcggcggcggcgctggagggggg
cagccactctccaggagccagcagccctccagcccaatggatcagatggggaagatgaga
cctcagccttacggaggaaacaacccatatacacagcagcagggacctcagtcagggcaa
caacaaagtcatggatatccagggcagccatatgggccacagactcctcagagataccca
atggcgatacagagcaggacgcagagtgcgatgggcactgtctcttatgcacagcagatt
cctccttacggacagcagggccctagcggatatgggcaaccgacccagactccctattac
aaccagcagagtcctcatccccagcagcagccttcatacgctcagcagtccccatctcag
acccctcaccctcagccttcttatcagcagcaacaaactcagtctcagcctccgcagctc
cagtcctcccagcccccatactcccagcagccatctcagccaccccatcaacagtcgcca
tctccgtatcctcagcagcaatcttctgcccagcagcatccacagagtcagcctgcctat
tcgcagcagcagtctcagtcaccttaccagcagcagcagcagcagcagcaacagcagcag
cagcagcagcagcaaactcagcagtctgttacctcggcgctttctcaacaaacggcatct
tatcctcagtctcagtcacagcagcaatcggcgtattctcagcagcgcttcccaccacca
caggagatctcacaagactcatttgggtcccaaacatcatctgctgcctcaatggcttcc
agtaaagggcaagaagacgtaactttgaatcttcagtcaagaccatctagcttgccggat
ctctctggctcgatagatgatctgcccatgggtacagaaggagcactgagtcctggcgtc
agcacatcagggatttccagtagtcagggagagcagagcaacccagctcagtctcctttc
tctccgcatacctctcctcatttgccaggcatcagaggaccttcgccatcgcctgttgga
tctcctgctagtgtcgcgcagtcacgttctggcccactctctcctgctgcagtgccaggc
acccagatgccctctcgaccacccagcggccagtcggatagcatcttacatccttccatg
aaccagtcaaccatagccccagatagaggttacatacagaggaatccacagatgcccccg
tataattcccctcagcctgggtccgccttatcgccacgtcagtcttctggaggacaaatg
catgccgggatggcgccttatcaacaaaattccatgggcagttatggacctcagggaggt
caatacgggccacaaggtggctatcccaggcagccaaactacaatgctatgcccaatgca
aattatcccaacccaggaatggggggaagcctaaacccaatgggagcaggaagccagatc
catggtcagactggtgtccctccctatcctgggcttcctccaggaagaataagccacgct
gctatggggaacaggccctatggacccaacatggcaaatatgcctccccaggtagggact
ggaatgtgtcctcctccaggtggcatgaacccgaaagcacaacaagctgctgccgctgct
atgcatgctgctgccaccaactcaatccagaataggccatctggttaccccaatataagc
caaggtggaatgatgggcactggacctccatatggccaaggaatcaacagtatggctggc
atgctcaatccgcagggcccaccttattcaatgggtggaaacatggccaacaattctgca
gggatggctgcgagtcctgagatgatgggacttggggatgtcaagctcacacctgcagcc
aaaatgaacaataaatcagatgggacaccaaaatctgaatccaagtcaaagaaatccagc
tcctccactaccacaaatgagaagattactaagctatacgagctgggtggtgagccagag
aggaagatgtgggtagatcgctatttgtccttcacggaagagaaagcaatgggcatgacc
aatcttccagctgtgggccggaaaccgctagacctgtatcggctctatgtctcagtgaaa
gaaattggaggactaactcaagtgaacaaaaacaagaaatggcgcgagttggctaccaat
ttgaatgtgggcacctctagtagtgcagctagctctctgaagaagcagtacatccagtgt
ctctatgcctttgagtgcaagattgagcgaggcgaagaccctcctccagacatcttttct
actgattcaaagaagtcacagcccaaaatacagcctccatctccagcgggttcaggttcc
atgcagggtccacaaacacctcagtccaccagtagctctatggcagaaggaggagacctg
aagcccccaactcctgcatcaaccccacacagtcaaatgccccctttgccaggcatcagg
agtaactcagtaggacttcaggacgcctttcctgatggcagtgaccccactttccagaaa
aggaactccatgactccgaatccagggtaccagcccagcatgaatacttccgacatgatg
ggccgcatgtcctacgagccaaataaggatccatatggcagtatgagaaaaggaagtgat
ccctttatgtcctcagggcagggccctaacactggtatgggcgatccttataatcgtgct
gcaggtccagggattagtaacatggctatggggcagaggcaacattatccttatagccca
tatgagagagtgagaactgaagcaggaattggacctgaagccaacttaggcagtggaacg
ccccagcccaacatcatgccttccactcctgattcagggatgtattctcccagccgctat
ccacagcagcagcagcagcgacatgattcctatagcaatcaatttcccactcaaggtaca
tcctctggcagccccttcccaactcaacaaaccaccctgtatcaaccgcaacagcagaat
tacaaacggccgatggatggcaactatggccccccagccaaacgacacgaaggggagatg
tacagtgtatcgtatagcacaggacagggtcaagtcccccagcagctgcctccggcacaa
acccagcaaccgagccagcaaccaactgctcagccttccccgcagcaggaaatgtttaac
cagtttggaaatacatactctgccactgaccgccgacccggtgggccacagaaccagttc
ccattccagtttggccgagatagggtctctgctcccccgggttccagcacacaacagagt
ataccgcctcagatgatgggtggtcctgttcagtccactccagagggccctcagcagggc
agcatgtggcaagggcgtaacgagatgagctacggctatcctaaccggcagagtccaggc
tctgcgccacaagggcctgcatatcacggagtgaatcgaacagacgaaatgctacacccg
gatcagagggtcaatcacgagggaccgtggccttctcatgggaaccgtcagcctccttat
ggtccctccgcccctgtgccccccatgacaaggccgccgcagccaaactatcagacccca
cctagcatgcagaatcacattcctcaggtatctagtccagcacctctttccaggccggtg
gaaaaccgcacctctcctagtaaatctccatttctgcactcgggaatgaaaatgcaaaag
gcagggccaccagtccctgcctcacatataacaccagcagccgtacaacctcctatgata
cgacgggacatcacattcccacccggatctgtggaagccacgcaacctgtgctgaagcaa
aggcggcgcctgaccacaaaagatattggaacgccagaagcctggcgagtgatgatgtct
ctgaaatctgggttattggctgaaagcacgtgggccttagataccatcaacatcctactt
tatgatgataacagcatcatgacctttaacctcagccagctgcctggattgttggagctt
ttggtggaatatttccggcgttgcctgattgaaatctttggaattctgaaagaatatgag
gtgggagatccagggcaaagaacattattggatcctgaaaaggtctgcaagtcttcaagt
ccctctcctgaagagggggagaaagacgacccccagagcccaaactgtgcgaaagaagag
gaagaggaggaagaagaggaaggggaggaagaggctgccttcacaaataaagctgtagcg
cccttagaaaacaccgaggaaaaactggtcagtaagtttgacaagcttccagtcaagata
gtgcagaagaatgacccatttgtggtagattattcagacaaactcggccgggtacaggag
tttgagagcgggctgctgcattggcggattggtgggggagacaccactgaacacattcaa
acccactttgagagcaaaatggagctgccactggctcacaaacgagcttcctgcaactct
gttccacggaaacgattagtagctgagagcaaccccgtcgcccaggaaggagggcccatt
ccgtctgatggtcctccagagaaaaggataacagcgaccatggatgacatgctttcggca
cggccgggtgcgttggcagaggaggaggtcaggaatgtggaggtgaccaaggagagcagt
aaatttccattcggcatcagtcctgctcaaagccaccgaaacataaaaatactggaggat
gagcctcacagtaaggatgagacccctttgtgtactcttctagactggcaggactcgctg
tctaaacgctgcatctgcgtgtctaatatcatcaggagtttatcatttgtgccaggtaat
gactttgagatgtccaaacatcctggtttgctgctgatcctggggaaactgatccttctg
caccataagcatcccgaacgcaaacaggcaccactgacctacgagaaggaagaggagcaa
gaccaaggagtgagctgcaacaaagtggagtggtggtgggactgcttggagatcctgcgc
gagaatacactggtcacgctggccaacatctctgggcagctggacctctcgccgtaccca
gagagcatctgtttgcctgtcttggatggactcctccactgggccgtgtgtccttctgcg
gaagcccaagatccttttccaaccctcggtcccaatgctgtcctctcacctcagagacta
gttttagaaactctcagcaaactcagcatccaggacaacaacgtggatttgatcctagca
acaccacccttcagtcgcttggaaaaactctacggcaccatggtgcgtttcctcagtgac
agaaagaacccggtttgccgagagatggctgtggtactgctggccaacttggcgcagggt
gacagcttggcagctagagccattgccgtgcagaagggcagcattggcaacttgttaggc
tttttggaggacagcctggcagctactcagttccagcagagccaggccagtttgatgcac
atgcaaaaccctccctttgagccaacgagcatggacatgatgcgccgggcagcccgagcg
ctgctcgccctggccaaagtggacgagaaccactccgagttcacgttatatgagtcacgg
ctcttggacatctccgtgtcacccttgatgaactcattggtctcacaagttatttgtgac
gtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
