Sphaerodactylus townsendi (Townsend's least gecko): 125434522
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Entry
125434522 CDS
T08213
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125434522 (SRRM1)
03015 mRNA surveillance pathway
125434522 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125434522 (SRRM1)
03041 Spliceosome [BR:
stow03041
]
125434522 (SRRM1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125434522 (SRRM1)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
125434522 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
125434522
NCBI-ProteinID:
XP_048355956
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All DBs
Position
LG06:complement(95061728..95087862)
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AA seq
906 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKENREKRDRSRSPRRRKSRSPS
PRRRSSPVRKERKRSHSHSPHHKAKSRSVTPAPEKKEETPEPEPSIKVKETLIQEATSTS
DILKIPKIEPVPDTKEMTPERGSKKEREKEKDKNRQRSPSRSKSRSKSRSRSQSHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRIPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRVVSSPPRKTRRLSPSASPPRRRHRPSPPPSPPPKPRRSPTPQQ
SIRVRKTRGSVSPSRTSAPKHKSIEKRESPSPAPKTRKVELSESEDDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEEERPKKSNVKNGEVGRRRQHSHSRSPSPSPRKWQKDSS
PRMQMGKRWQSPIVKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRH
SPTPRRYSPPIQRRYSPSPPPKRRTASPPPKRRASPSPQPKLRVSRSPPPKQRSSPPPKR
RSPSISSKHRKGSPPSRSNREARSPMQNKRHSPSPRPRPSRTSASPPPIRRGPSSSPPRR
LSPSPSTRPIRRVSRTPEPKKSKKPSMPSPHSARRGSSSRSASGSPEPPPKKHQTPPSPI
RSQSPTAHWSPPAPAKKAKSPTPSPSPVRNSDQEGSGKKKKKKKDKKHKKDKKHKKHKKH
KKEKAAAAAAAAIAVLTPPAPEDQEKNTEPTKETESEPEDNLDDLEKHLREKALRSMRKA
QASPPP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcgggacaagtgcagaacaggacaaccgcttcagcaacaaa
cagaagaagctcctgaagcaactgaaatttgcagaatgcctagaaaagaaagtggacatg
agcaaagtaaacctcgaagtaatcaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactgggttcttgaatgggaaaaatgctagagag
ttcatgggggaactgtggccattactgctgagtgcccaagaaaacattgctggtattcca
tctgctttcctggagctgaagaaagaagaaataaaacagagacaaattgaacaggaaaaa
ttggcttctatgaagaaacaagatgaagacaaagataagagagacaaggaagataaagaa
aacagagaaaaaagggacaggtccagaagccctagaaggcgcaaatcaagatctccttcc
cctcgaaggcgctcctctcctgtgaggaaagagaggaaacgcagccattcccactccccc
caccataaagcgaaaagtcgtagtgttactcctgcaccagaaaagaaagaagagactcct
gagccagagccttcaatcaaagtaaaagaaacactgatccaggaggcaacatctactagt
gatatattgaaaatacccaaaattgagcctgtgccagatactaaagaaatgactccagaa
agaggttcaaagaaggagagagagaaagaaaaggacaaaaatcgtcaaaggtctccatcc
cgatccaaatcaaggtcaaaatctcgctcacgctctcagtctcattcaagaccaagaagg
cgtcacagatcacgatccaggtcttattcaccaaggagacgccccagcccaagacggcgc
ccgtctcctcggagaagatccccaccaagacgtattccacctccaccaaggcacagaagg
agcagatctcctgtgaggcggaggagacggtcatcagcatctttgtcaggaagcagttcc
tcttcttcctcttcacgttctcgatctccgccaaaaaagccacccaagagggttgtctcc
agtcctcctcgtaaaacacgtagattgtctccttctgcaagtccccctaggcgaaggcac
cggccatccccgcctccaagtccacccccaaaaccacgcaggtctccaacacctcagcag
tcaatccgtgtgagaaagacccgaggctcagtttctcccagtagaacctcagcacccaaa
cataaaagtattgaaaaaagggaatctccctcaccagcaccgaagactagaaaagtagaa
ctgtcagaatcagaagacgataagggtggcaaaatggcagctgcagattctgtgcaacaa
agacgacaatacagaagacagaaccagcagtcttcatctgattctggctcgtcatcttcc
tctgaagaggaacggccaaaaaagtcgaatgtaaagaatggtgaagtgggcaggcgcagg
cagcactctcattcccgcagtccgtctccctccccacgaaaatggcagaaagattcttcc
cctcggatgcagatgggaaagaggtggcaatcaccaattgttaaaagtaggaggaggcga
agtccctcaccacctccagccagaagacggcggtctccttctccggccccacctccgaga
cggcgccggtcaccttctttaccacgtcgaaggtctccatcaccacctcctcgccggcac
tctcccacacctaggagatattctcccccaatacaaagaagatactccccttcaccacca
ccaaagcggagaacagcttctcctccacccaagcgaagggcatctccttctccacagccg
aagctcagagtctctcgctctccgccaccaaagcaaagaagctctccgcctcccaagaga
cggtcgccatccatatcttccaagcacaggaaaggatctccacccagcaggtctaaccgg
gaagcccggtccccaatgcagaacaaacggcattcaccttccccacgtcccaggccttca
cgtacttctgcaagtcccccaccaatacgcagaggaccttcatcttcaccaccacgtcgg
ctgtctccatctccaagcaccaggcccatcagaagagtgtcaaggaccccagaacccaag
aagtcaaaaaagccatccatgccgagtccacattctgcaagaaggggatcttcatctagg
tctgcatcaggatcacccgagccaccccccaagaaacatcagacccctccttctcctata
cggtctcaatcacccactgctcactggtctcctccagctcctgcaaagaaggctaagagt
cctacaccaagtccatctcctgtcaggaactccgatcaggaagggagtggcaagaagaag
aagaaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcat
aagaaggaaaaagctgcagcagctgcagcagctgcaatagccgtgcttaccccaccagcg
cctgaagaccaagagaaaaatacagagcccacgaaggagactgagagtgaaccagaagat
aacctcgacgatttggaaaaacatcttcgtgagaaagctctgaggtcgatgaggaaggcg
caagcatctccacccccttag
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