Sphaerodactylus townsendi (Townsend's least gecko): 125434542
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Entry
125434542 CDS
T08213
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125434542 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125434542 (LAMB1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
COG3_N
OVT1
VipD-like_C
Filo_VP35
Motif
Other DBs
NCBI-GeneID:
125434542
NCBI-ProteinID:
XP_048355990
LinkDB
All DBs
Position
LG06:85221998..85293818
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AA seq
1782 aa
AA seq
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MGLFQVYFGCFLGLWATAVGQEPEFSYGCAEGSCYPATGDLLIGRASKLSVTSTCGLQKP
EPYCIVSHLQEDKKCFICDSRDPFHETINPDSHRIENVVTTFAPNRLKLWWQSENGLENV
TVQLDLEAEFHFTHLIMTFKTFRPSAMVIERSSDFGKAWQVYRYFAYDCENSFPGVNSGP
MKKVDDVICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFTKLH
TLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVNGHDEEVEGMVHGHCMCR
HNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNEHSVECHFDMAVYLATGNSSGGV
CDNCQHNTVGRNCEQCKPFYFQHPERDIRDPNICESCNCDPIGSQNGGICDRYTDFSAGL
IAGQCRCKLFVEGERCDICKEGFFGLSGDNPLGCQSCACNPLGTHPGGNPCDSETGSCYC
KRLVTGRRCNECLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCLCRPHMIGRQCS
EVEPGYYFISLDHYVYEAEETIFGPGVSIVERQYSQERTPSWTGIGFARVPEGAYLEFYI
DNIPYSMEYDVLIRYEPQLPDQWEKAVITVFRPATIPSSSRCGNTIPDDDNQEVSLSPGS
RYVVLPHPICFEKGLNYTVRLELPQYSYNTEVENPYTLIDSLVLMPFCKSLDIFTVGGRG
DDVMTNSAWETFQRYRCLENSRSVVKTPMTDVCRNMIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRRCDKCAPGTFGFGPSGCRACECHVQASVNPFCHPETGQCHC
FHGIYGRICDRCLPGYWGFPNCQACQCNGHADDCDPYSGQCLNCQDHTSGHNCERCLGGY
YGDPVLGSGDHCRPCPCPDGPETGRQFASGCYQDPVTLQVVCVCEKGYKGSRCGECASGF
FGNPEEVGGTCRPCQCNNNIDLTDPEACDKKSGLCLKCLYHTEGRNCQLCKHGYYGRALQ
QDCRRCVCNYLGTVRERCNSTSECECEKETGQCQCLPNVIGQNCDRCATNTWKLASGTGC
EPCDCDTERSFGSSCNEFTGQCQCMPGFGGRTCSECQEFYWGDPSVECQACDCDSRGVQT
PQCNRTTGQCICKDAVEGLRCDKCTRGYSGTFPDCAPCHQCFALWDIIISELTNRTQRFL
ERAKALKITGVSGPYQQTLNSVEEKLNEIKSIIAQNPAAQPLKNIANLFEEAEKLTADVT
EKIEEIEGKLSKVASESKSVDNQLNDLESDAKNVDNVVKTIAEQLELMKNSDIRGAVDSI
TKYFQMSLTAEERVNASTLLPGSIIEQSAELRLEVESLINETEFEAKEEEHSRLLDELAG
KLQSLDLAEVAEKTCGTPPGASCSDSKCGGLGCRTEDGKKKCGGPGCDGLVTLSHNAWQK
AMDFDRDILVALEDVELLSIMVSEAKVRADEAKRNAQEVLLQTNATKEQVDRSNRDLRNL
IKQIRDFLMKDSADLDSIEAVANEVLNMEMPSTPDQLQALADNIRERVESLSDVEIVLQQ
SSGDIARARALLHEAKQASKSATDVKVTADMVKEALEEAGKAQNAAEKAIKLADEDIQGT
QDLLTSIESETTASEETLANATLRIAELEKNVQELRRKAATNSADIRVVEETVASVNRTT
GDVKKVLDNDVNDKYKTVELLIAKKTGESADARKKAEALQNEAKTLLDQANSKLQLLREL
ENTYEQNQRVLEEKAKQLVQLEETVRGLLQAISQKVAVYSTC
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttccaggtgtactttggctgctttctaggtctctgggccactgcagtaggc
caggaaccagaattcagttatggatgcgctgaggggagttgctatcctgctaccggagac
ttgctaattggacgagcttcaaaactttctgttacctccacctgtgggctccaaaaacct
gaaccatactgtattgtgagtcacctccaggaggataaaaaatgttttatatgtgattca
cgggacccattccatgagacaatcaacccagacagtcaccgtattgagaatgtggtcact
acctttgctccaaaccggctcaaactgtggtggcagtcagaaaatgggttggaaaatgtc
actgtccagctggatctagaagctgaattccatttcactcatctcatcatgaccttcaag
acatttcgtccatctgcaatggtgattgaaagatcctcagattttgggaaagcttggcaa
gtttatagatattttgcctatgactgtgagaattctttcccgggtgttaactctggacca
atgaagaaagtagatgatgtgatttgtgattcccggtattctgatattgagccttcgaca
gagggagaggtaatttttcgtgctctagatcctgcttttagaattgaggacccgtacagt
ccaaggattcagaatttattaaagatcacaaacttaagaatcaaatttaccaaactacat
acactgggagacaaccttctggactcaagaatggaaatcagagaaaaatattattatgcc
atttacgacatggtggttcgtgggaattgcttctgttatgggcatgccagtgagtgtgca
ccagtgaatggacatgatgaagaggtggagggaatggtccatggtcattgcatgtgtagg
cacaacaccaaaggcttaaactgtgaacagtgcttggacttttatcacgatttaccatgg
cgtcctgctgaaggtcgcaacagcaatgcatgcaaaaaatgcaactgcaatgaacattct
gtagagtgccattttgatatggctgtgtacctggcaactggaaatagcagcgggggagtg
tgtgacaactgccagcataacactgtggggcgtaattgtgagcaatgcaaacctttctac
ttccaacatccagagagagatatccgggaccccaacatttgtgaatcatgcaactgtgat
ccgattggctcccagaatggtggaatatgcgatcgctatactgacttctctgctggactt
attgctggccagtgcaggtgcaaattatttgtggaaggggaacgctgtgatatctgcaaa
gaaggtttttttggattaagtggagacaatccacttggttgtcagtcttgtgcatgtaat
cccttgggcacacatcctggagggaatccttgtgactcagagaccggaagctgctattgt
aagcgtcttgttacaggaagacgctgtaatgaatgcttgcctgaacactgggggctgagc
aatgatatggatggatgtcgaccatgtgactgtgatcaaggaggagcactgaacaataac
tgttctagtgaatctggccagtgcctttgcaggcctcatatgattggccgacaatgcagt
gaagtggaaccgggttattactttatttctttagatcattatgtctatgaagcagaggaa
accatctttggtcctggagtgagcatagttgagcgtcaatattctcaagagcgtacgcct
tcatggactggaataggatttgccagagttcctgaaggagcatatctggaattctacata
gacaatattccatactctatggagtatgatgttttgattcgctatgaaccacagttacca
gatcagtgggagaaagccgttatcactgtatttcgcccagccacgattccgagcagcagc
agatgtggtaatacaattcctgatgatgataaccaagaggtatcactatctccaggttca
agatatgtagtccttccacatccaatatgctttgaaaagggattaaattacactgttcgt
ttggagctgccacagtactcctacaatacagaggtggaaaatccatacactctcattgac
tcacttgtccttatgcctttttgcaaatcactggacatattcacagttggaggaagagga
gatgatgtgatgactaacagtgcctgggaaacgtttcagagataccggtgcctggagaac
agcaggagtgttgttaaaacacctatgactgatgtttgcaggaatatgatttttagcatc
tcagcgctattgcatgagacagcattgtcttgccaatgtgatcctcaaggctcgttaagt
tctgtgtgcgatcctaatggaggccaatgtcagtgtcggccaaatgtggtaggaagaaga
tgtgacaaatgtgctcctggcacttttggatttggacctagtggatgcagagcatgtgag
tgtcatgtccaagcttctgtcaatcctttctgccacccggagactggacagtgccactgt
ttccatgggatatatggccgtatatgtgacagatgcttacctggttactggggatttcca
aactgtcaagcttgccaatgcaatggccatgcagatgattgcgacccatacagtgggcag
tgtttaaattgccaggatcatacttctggacacaactgtgaaaggtgccttggtggttat
tatggtgatcctgttctgggatctggagatcactgccgcccttgcccttgtccagatgga
ccagaaactggccgccaatttgccagtggctgttaccaggatcctgtcacactgcaggtg
gtttgtgtctgtgagaaaggctacaaagggagcagatgtggtgaatgtgcttctggcttc
tttggaaaccctgaggaagtcggagggacttgcaggccttgccagtgtaacaacaacatt
gatctgactgatcccgaggcctgtgacaaaaagtcaggattgtgcttgaagtgcttgtat
catacagaggggagaaactgccagctgtgtaaacatggctattatggacgggcccttcag
caggactgtagaaggtgtgtttgcaattatttgggaacagtacgtgaacgttgcaacagc
accagtgaatgcgagtgtgaaaaagaaacaggccaatgccagtgtcttccaaatgtgatt
ggacagaactgtgaccgctgtgctacaaacacgtggaagttagccagtggcacagggtgt
gaaccatgtgactgtgatactgaacgttcctttggctcttcttgtaacgagtttactgga
cagtgtcagtgtatgccaggattcggagggcgcacatgtagtgaatgccaggagttttac
tggggtgacccaagtgtggagtgccaagcttgtgactgtgattcccgtggcgtccagacc
ccccaatgcaatcgcaccactgggcaatgtatttgtaaggacgcagttgagggactccga
tgtgataagtgtacccgaggctattctggcaccttcccagactgtgcgccatgccaccag
tgctttgctctctgggatatcatcattagcgagctgactaataggacccagagattcctg
gagagagcaaaggctttgaaaatcacaggggtcagcggtccttaccagcagacactcaac
tctgtagaggaaaaattgaatgagattaaaagtatcattgctcaaaatccagcagctcag
cctcttaagaacatcgcaaatctctttgaggaagcagagaaactaacagcagatgttaca
gaaaagatagaagaaatagaaggaaaattatccaaggtggcatcagaaagcaaaagtgtg
gacaatcagttgaatgacctagagtcagatgcaaagaacgtagacaatgttgtgaagaca
attgcagaacagctggagttaatgaaaaactctgatattcggggtgccgtagacagcatc
accaaatatttccaaatgtctctgactgcagaagagagagtgaatgcctccactctcctt
cctggcagcataatagagcagtcagctgaactgcggctggaagtggaaagcctgatcaat
gaaacagaatttgaggctaaggaagaggaacattctcgactcttggatgaactcgcaggg
aaattgcaaagtctggatctggcagaagtggctgaaaagacatgcggaactccccccggg
gcttcctgttctgattcaaagtgtggcggcctgggctgtcgaactgaggatggaaagaaa
aaatgcgggggacccggctgtgatggattagttaccctgtcccacaatgcctggcaaaaa
gccatggattttgacagagacatacttgttgctctagaagacgtcgaactgctctctata
atggtgtctgaagcaaaagtgagggctgatgaagcaaaacgcaatgcgcaagaagttctg
ctacaaaccaatgcaaccaaggagcaagtggatcgaagcaacagggacctgaggaacctt
attaagcagatccgggactttctgatgaaagacagtgctgatctggacagcattgaagca
gttgctaatgaagtgctcaacatggagatgcccagcacaccagatcagttacaggccctg
gcggacaatattcgggaacgggtggaaagcctttctgatgttgagattgtcctacagcag
agctctggagatattgcaagggcccgggcactgttgcatgaagctaagcaagcaagtaaa
agtgcaacagatgttaaagtcaccgcagacatggtgaaagaagctctggaagaagctgga
aaagcccagaatgcagccgaaaaggccatcaaactagcagatgaagatatccagggaaca
caagacctccttacctctattgaatctgaaaccacagcatcagaagaaaccctggctaat
gctactttgcgcattgctgaactagagaagaatgtgcaagagcttaggcgaaaagctgct
acaaattcagcggacattagggtcgttgaagaaactgttgcttctgtcaatcgaactacc
ggagatgttaaaaaagtcttggacaacgatgtcaatgacaagtataaaacagtagagctc
ctaattgccaaaaaaacaggggagtctgcagacgcccggaagaaagcagaagcactgcag
aatgaagcaaaaacactgctagatcaagcaaacagcaaactacagctgctcagagagttg
gaaaatacgtatgaacagaaccaaagagtcctggaagaaaaggccaagcagctggtacag
ttggaagaaacagtccgtggccttctgcaagctattagccaaaaagtcgctgtttacagt
acctgttag
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