Sphaerodactylus townsendi (Townsend's least gecko): 125435635
Help
Entry
125435635 CDS
T08213
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125435635 (ZC3H12A)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
125435635 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
125435635
NCBI-ProteinID:
XP_048357863
LinkDB
All DBs
Position
LG06:103901565..103920925
Genome browser
AA seq
664 aa
AA seq
DB search
MDLDGVSPARGFPGWSDPGPSRPRPQKEPRESAPFESGYLSLNVAAPCSRGRTPEEQHGA
PSLADPELQSWHEQERAEMQLRVDFFRKLGYSAEEIWVVLQKLGSNADTNTVLGELVKHG
VAAGERDPADAAQEAPEPPVPAQHRSVLPAVPLERKEDENLRPVVIDGSNVAMSHGDKDV
FSCRGILLAVNWFLDRGHTDITVFVPSWRKEQSRPEVPISDQHILRDLEKKKILVFTPSR
RVGGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQMERPEWKKFIEERLLMYSFVSDKF
MPPDDPLGRHGPSLDNFLRKKPVLPELRKQQCPYGKKCTYGIKCRFYHPERLNHLQRSVA
DELRANARLSPTRSAATKEEGHGRRPVQAEFLGCLEGDKITLLKASTEKKSCVSKAKHGD
APPPLPKGSTSAGATPVGSSSSYRPPEWDQPPALSPHMDSLSYMSQDHLDSGIGSLENQL
SEMWPSSLACHGKHSHPEHLGMTAHRGQSSAYHLPPGPESSSYSHYQPHGYPKPVSAPGS
NAGFLQYRTDLSHPRAAHSFSSYGVPPDSGASLSPGRKYWSEPYQPPPAAPQDLARAPQL
TYNDSCQWASADRFAEERANVHVKLCGIFHPHLVDAVMSRFPQMLDPQQLAAKILTYKSQ
NPRV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatctggacggcgtctcgcccgcccggggctttcccggctggagcgacccgggaccg
tcccgcccgcgcccgcagaaggagccccgggagagcgcgcccttcgaaagcggctacctg
agcctgaacgtggcggcgccctgttctcggggcaggaccccggaggagcagcacggcgcg
cccagcctggcagaccccgagctgcagagctggcacgagcaagagcgcgccgagatgcag
ctgcgagtggacttctttcgcaagctgggctactccgccgaagagatctgggtggtcctc
cagaagctgggctcgaacgcggacaccaacactgtcctgggggagctggtgaagcacggc
gtggcggcgggggagcgagatccggccgacgctgcacaggaagccccggagccgccggtg
cctgcgcagcacaggagcgtcctgcctgccgtgcctttggagcggaaggaggacgagaac
ttgcggcctgtcgtcatagatggaagcaatgttgccatgagccacggggataaagacgtc
ttctcttgccgaggcattctgctagccgtgaactggttccttgaccgaggacacacggat
atcacggtctttgtgccatcttggagaaaggagcagtcgaggcccgaagttccaatctca
gatcagcacatcctgcgtgaccttgagaagaagaagatccttgtcttcacgccttcacgc
agggtggggggcaagcgagtggtctgctacgatgaccgcttcattgtgaagctggcctat
gagtcagacggcattatcgtgtccaatgacacctaccgagatctgcagatggagcgcccg
gagtggaagaagttcattgaggagcgcttgctgatgtattcctttgtcagtgacaagttc
atgcctcccgatgacccactagggcgacatggccccagcctggacaacttcctgagaaag
aagccggttctgcctgaactcagaaagcagcagtgcccctatggcaagaaatgcacatat
ggaatcaagtgcagattctaccaccctgagcgcctcaaccaccttcagcgttccgttgct
gatgagctgcgagccaacgcaaggctgtctcccaccaggagtgccgccaccaaggaagaa
ggacatgggcggcgccctgtgcaggctgaattcttgggctgcctcgagggtgacaagatc
accttgctgaaagcctccacagagaagaaaagctgtgtctctaaagcaaagcatggggat
gcaccaccacccttgcccaaaggcagtactagcgctggggcgacccctgttggtagcagc
agcagctaccgtcctccagagtgggaccagccacccgcactctccccccacatggactcc
ctgtcctatatgtctcaggaccacctcgactctggcattggctccttggagaaccagctg
tctgagatgtggcccagctctttggcctgccacggcaagcattcccacccggagcacctg
gggatgactgcccacaggggacagagctcagcctaccatctacctcccggccctgagtcc
agtagctacagccactaccagccccatggctatcccaaacccgtctcggcacctggctcc
aacgccggcttcttgcaatacagaacagatttgtcgcaccccagagcagctcactccttt
tccagttacggcgtgcctcctgactccggcgcttctctgagccctgggcggaagtattgg
tccgagccttaccagcctccccctgcagcaccacaagatttggccagagctccccagctg
acctacaatgactcctgccagtgggcctcagctgatcgctttgctgaagagcgtgccaac
gtgcatgttaagctgtgtgggatcttccaccctcacctagtggatgctgtcatgagccgc
ttcccacagatgttggatcctcagcagctggctgccaagatcctcacttataagtctcag
aatcctcgagtgtga
DBGET
integrated database retrieval system
