Sphaerodactylus townsendi (Townsend's least gecko): 125435661
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Entry
125435661 CDS
T08213
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125435661 (SMG9)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
125435661 (SMG9)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
BrxC-PglY_N
Motif
Other DBs
NCBI-GeneID:
125435661
NCBI-ProteinID:
XP_048357907
UniProt:
A0ACB8FSB9
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Position
LG06:120985568..121003199
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AA seq
510 aa
AA seq
DB search
MSESGHSQPGLYERRRRWNRDKELGHQSLSGPGRDRDYVPWDRDRDRRDPMDEPVGSMMQ
KTPIILAKPPAERSKGAPPAAPAPAPAAAPPIEKPIVLMKSREEGKGPVGAIETSTQPPA
AVAKVEKEGQRPTQPVYQIQNRGMGSTASSGVMDPVVGQAKLLAPERMKHSIKLVDDQMN
WCDSAIDFLLDQTDVLVVGVLGLQGTGKSMVMSLLSANQPEEDQRTYVFRTQSQEIKERG
GNQTSGIDFFITQERIIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAA
FLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSNSSGTDEGTEYYPHIVF
LQNKAKRENFCPRNLKQMHLVVDKIMMHSHLKYKGTLSMLDCNIFPGLPPSYLDTEVNLF
LLPFMDTDADDALPRAAPGSGPLFSLLPGYKGHPSFPSLIAKLRSQIMSMSRPQLSHTIL
TEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcggggcacagccaacccgggctgtatgagcgtcgccgccgctggaaccgt
gataaggaattgggtcaccagagcctgtctgggccaggccgggaccgcgactatgtcccc
tgggaccgtgatcgagatcggcgggaccccatggacgagccagtgggatccatgatgcag
aagaccccgatcatcctggccaagccacctgcagaaaggtccaagggagccccgcccgca
gctcccgctccagcacctgctgctgccccacctatcgagaagcccattgtgctgatgaag
tcccgggaagaaggcaaaggtcccgtgggggcaatagagacatccacccagccccctgca
gctgttgccaaggtggagaaagagggccagcgccccacgcagccggtctatcagatccag
aacagggggatgggctcaaccgcatccagcggcgtcatggaccctgtggtcggtcaggcc
aagctgctagccccagagaggatgaaacatagcatcaagctcgtggatgaccaaatgaac
tggtgcgacagtgccattgacttcctcctggaccaaactgatgtactggtagttggagtg
ctgggattgcagggtactggcaagtccatggtgatgtcacttttgtcagccaatcaacct
gaagaggaccagagaacctacgtgttccgcactcagagccaagagatcaaggagcgtggg
ggcaaccagactagcggcattgacttcttcatcactcaggagcgaatcatcttcttggac
actcagccaatcctcagcccctccatcctggaccacctcattaacaacgatcgcaagctg
cctcctgagtataacctaccgcacacctatgttgagatgcagtccctccagatcgccgct
ttcctgttcaccgtctgccacgtggtcatcgtagtgcaggactggttcacggatctgagc
ctgtacaggttcttgcagacggctgagatggtgaaaccttccactccgtcccccagccat
gaatccagcaactcctccggcacagacgagggcacagagtactacccacacattgtcttt
ctccagaacaaagccaagagggagaacttctgtccccggaacctgaagcagatgcacctt
gtggtcgataagatcatgatgcactcccatctgaaatacaagggcaccctctctatgctg
gactgcaacatatttcctggcctgcccccgagttatctggacacagaggtcaacctgttc
ttgctgcctttcatggacacagatgcagacgatgctttgcccagagcagcccctggaagc
ggcccactcttctctctcttgcccggctacaaagggcaccccagcttcccgtctctgatt
gccaagctccgcagccagatcatgtccatgtcccggccgcagctctcccacaccatcctg
acggaaaagaactggttccactatgcggcacgcatctgggatggtgtgaagaagtcctct
gcccttgcagagtacagccgcctgctggcctga
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