Sphaerodactylus townsendi (Townsend's least gecko): 125435901
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Entry
125435901 CDS
T08213
Symbol
SMO
Name
(RefSeq) LOW QUALITY PROTEIN: smoothened homolog
KO
K06226
smoothened
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125435901 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
stow04030
]
125435901 (SMO)
G protein-coupled receptors [BR:
stow04030
]
Frizzled / Smoothened family
125435901 (SMO)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Comm
Motif
Other DBs
NCBI-GeneID:
125435901
NCBI-ProteinID:
XP_048358349
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Position
LG06:6118719..6154766
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AA seq
828 aa
AA seq
DB search
MASSGVGLALLLGLGALGGLRASGASNGSAERCKRAAPCEALRQPSCLGSPLPYAATSVL
LAGDSRSQDEARDKLLLWSGLRNAPRCWDVIQPLLCAVYMPKCEDGMVELPSQMLCQATR
GPCTIVERERGWPDFLKCTTDHFPEGCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVE
GCGIQCHNPLFTEKEHHEMHVYIAAFSSVTIFCTFFTLATFVADWKNSNRYPAVILFYVN
ACFFMGSIGWLAQFMDGARSEIVCRADGTMRLGEPTSDETLSCVIIFIIVYYSLMSGVIW
FVMLTYAWHTSFKALGTTYQPLVGKTSYFHLVTWSIPFVLTVAILAVAQVDGDSVSGICF
VGYKNYHYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLR
LGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIATQTNKPIPDCEIKN
RPSLLVEKINLFAMFGTGISMSTWVWTKATLLIWKRTWCRLIGRSSNEPKRIKKSKMIAK
AFSRRKELQQNPLQEMSFSMRTVSHEGPVAGLAFDLNESHGVRRFSGLWAPSICFKMVAR
RGAILPQDVSVTPVATPVPPEERASLWVVEAEISPRLERKLRRKKKKRRRKMEVSPDRPG
DARYDAPEVDSFAPRDVSSVPRLPQLPRNKCLVSGPKEPGNDTLPSRGYPRSRPGALQRE
DLFSRGMCESTAGYRQTSALHSISHPFCPEDGLPDEAGLGNAARLYPVPHPQLQRSSFFQ
QLSTGPPPASLFFRNSPYPSQTQARGLPPIHSRTNLMDAELLDADSDF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcgggggtgggcctggcgctgctgctggggctgggggcgctgggggggctg
cgggcgtcgggggcgtccaacgggagcgcggagcggtgcaagcgcgccgcgccctgcgaa
gccctccgccagccctcctgcctgggctcgccgctgccctacgccgccacctcggtgctg
ctggccggcgactcccgctcccaggacgaggcccgcgacaagctgctcctctggtccggt
ttgcgaaatgccccccgttgctgggacgtcatccagcccctcctgtgtgccgtttacatg
cccaagtgcgaagatggcatggtggagctgcccagccagatgctgtgccaggcgacgcgg
ggaccctgcaccatcgtggaacgggaacggggctggcccgattttctgaaatgcaccaca
gaccacttcccagaaggatgcccaaatgaggtccagaatatcaagttcaacagctcaggg
cagtgcgaggcccccttagtccggacagacaaccccaagagctggtacgaggacgtcgag
gggtgcgggatccagtgccacaaccccctttttactgagaaggagcaccatgagatgcac
gtctacatcgccgccttcagctcggtcaccattttctgcaccttctttaccttggccacc
ttcgtagcagactggaagaactcgaatcgctaccctgctgtcatcctcttctacgtcaac
gcctgcttcttcatgggcagcattgggtggctggcccagttcatggacggggcccgcagc
gagatcgtgtgtcgagcggacgggaccatgcggctgggagagcccacctccgacgagacc
ctctcttgcgtgatcattttcatcatcgtctactactccttgatgtcgggcgtgatctgg
ttcgtcatgctgacctacgcctggcacacgtccttcaaggccctgggcaccacctaccag
ccgctggtgggcaagacctcctacttccacctcgtgacctggtcgatccctttcgtcctc
acggtcgccattttggctgtcgctcaggtggacggggactcggtcagcggcatctgcttc
gtcgggtacaagaactaccactatcgggcggggtttgtgctagcccccatcggcctggtg
ttaatcgtggggggctatttcttgatcagaggcgtgatgaccctcttctccatcaagagc
aaccaccccggcttgctgagtgagaaagcggctagcaagatcaacgagacgatgctgcgg
ctggggatctttggcttcttggccttcggctttgtgttcatcaccttcggctgccacttc
tacgatttcttcaaccaggcggaatgggagcgcagtttccgggagtacgtcctctgtgag
gccaatgtcacaattgcgactcagaccaataagcccatcccagactgcgagatcaagaac
cggcccagcctcttggtagagaagattaacctctttgccatgttcgggactggtatttcc
atgagcacctgggtatggaccaaagccaccctcctcatctggaagcgcacctggtgcagg
ctgatcggccggagcagcaacgagcccaagaggatcaagaagagcaagatgatcgccaag
gccttctccaggcggaaggagctgcagcagaacccccttcaggagatgtccttcagcatg
cgtaccgtctcgcacgaggggcccgtggctggcctggcgtttgacctgaatgagagccac
ggggtccgacgtttctccgggctttgggctccaagcatctgctttaagatggtggctcgc
aggggagccatcttgcctcaggacgtttctgtcactcccgtggccacacctgtgcccccc
gaggaaagggctagcctgtgggtagtggaggccgagatctccccccggctggagaggaag
ctgcgccgcaagaagaagaagcgccggaggaagatggaggtgagccccgaccggccgggc
gacgcgcgctacgacgcccccgaagtggactccttcgcccccagagacgtcagctccgtt
cctcgccttcctcagctccccaggaataagtgtttggtatccggccccaaagaacccggg
aacgacacgctgccgtcgagaggttaccccagatcgagacccggcgctctgcagcgggaa
gacctgttttccagggggatgtgtgaatccacggccggctacaggcagaccagcgccctc
cattccatcagccaccccttttgccccgaagacggcctgccagacgaggcgggactcggg
aacgccgctcgcctgtaccccgtgcctcacccgcagcttcaacgcagcagctttttccag
cagctcagtacgggtccgccccccgcctccttattcttcaggaacagcccttacccgtcc
cagactcaagcgagggggttgccccccatccactcccggaccaacctcatggacgccgaa
ctgctggacgcagattctgatttctag
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