Sphaerodactylus townsendi (Townsend's least gecko): 125436184
Help
Entry
125436184 CDS
T08213
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125436184 (CHD1)
03036 Chromosome and associated proteins [BR:
stow03036
]
125436184 (CHD1)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125436184 (CHD1)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125436184 (CHD1)
SLIK complex
125436184 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
HDA2-3
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
125436184
NCBI-ProteinID:
XP_048358894
LinkDB
All DBs
Position
LG07:complement(48461636..48547292)
Genome browser
AA seq
1792 aa
AA seq
DB search
MNGHSDEESPRNSSGESSQSDDDSGSASGSGTGSSSGSNSDGSSSQSGSSDSDSGSESGS
QSESESDSSKEKKVQAKPPKVDGAEFWKSNPSILAVQRSAMLRKQQQQSKVASSNSSSEE
DSSSSENSADDSSSDIKRKKHKDEDWQMSGSGSVSGTASDSDLEEDRNKSTCDESESDYE
PKNKVKSRKPPSRIKQKGGGKSIGQKKRQLESSSDDDDDYDKRGSRRQATVNISYKEAEE
AKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGATTTIYAVEADGDPNDGF
DKSIEPGEMQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKNAS
PEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGA
LIAKKFQSCIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHDGLELRDYQLN
GLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQR
EIQTWAPQMNAVVYLGDITSRNVIRTHEWMHLQTKRLKFNILLTTYEILLKDKSFLGGLN
WAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSS
WEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYK
WILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQNLIRSS
GKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL
DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV
NIYRLVTKGSVEEEILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEELSA
ILKFGAEELFKELEGEEQEPQEMDIDEILKRAETRENECGPLSVGDELLSQFKVANFSNM
DEDDIELEPEQNSRNWEEIIPEVQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEG
RRRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERL
DAIARDAELVDKSEIDLRRLGELVHNGCIKALKDSSSGQERAGGRLGKVKGPTFRISGVQ
VNAKLVISHEEELAPLQKSIPSDPEERKRYTIPCHTKAAHFDINWGKEDDSNLLIGIYEY
GYGSWEMIKMDPDLNLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDIARKEAQRLSGA
GGSKRRKMKIKKNKMVKAKMKAEIKSDSSPPPSDKSEEEAEDSKDEVASVKHQNKKIKTE
KENEENLDADPGMKRETDEKREMKENKRDLKKEKKEKEDKKELREKDMKEKRESKVKDYS
QREKEAKEEKANESKSDSKDKPKKTPSPDTPVHITASSEPVPISEESEELDQKTFSICKE
KMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLW
IFVSKFTEFDARKLHKLYKHAIKKRQETQQYNDQNSSSSMNTHLIRNPDVERLKENTNHD
DSSRDSYSSDRHLPQYHDHHKDRLHGDAYKKSDSRKRPYSAFSNGKDHRDWDHYKQDNRY
YSDGKHRKLDDHRNRDHRSNLEGSLKDSRTHSDHRIHLDHRSSSDYSHHKSSRDYRYHSD
WQMDHRASSSGPRSPLDQRSYDSRSPLGHRSPFEHSTDHKSTPEHMWNSRKT
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtccacggaacagcagtggagaatcaagccagtca
gatgatgattccggttcagcatcaggttctggaactggttcaagctctggaagcaacagt
gatggaagtagtagccagtcaggaagcagtgattcagactctggctcagagtctggcagt
caatcagaatctgagtctgattcctctaaagaaaagaaggtccaagctaaaccgccaaag
gttgatggggctgagttttggaaatcaaacccgagtattctggctgtacaaagatctgca
atgctgaggaaacagcagcagcagtcaaaggtggcatcctcaaatagcagctctgaagag
gactcgtcaagtagtgaaaattctgcagatgactcatccagtgacatcaagaggaagaaa
cataaagatgaagactggcaaatgtctggatcaggatctgtatctggaactgcttcagat
tctgatttggaggaagacagaaataaaagtacgtgtgacgagagtgaatctgattatgag
ccaaaaaacaaagtaaagagcaggaagcctccaagcagaataaaacaaaaaggtgggggg
aaaagcattggtcagaaaaaaagacaacttgaatcatcatcagatgatgacgacgattat
gataaaagaggatctcgccgccaggcaacagtaaatattagttacaaggaagctgaagaa
gcaaagacggattcagatgatttactggaagtctgtggagaagatgtcccccaacctgaa
gaagatgagtttgaaacaatagaaaaattcatggatagccgtattggacgaaagggagct
acaggtgctacgaccaccatctatgcagttgaagctgatggagatccaaatgatgggttt
gataaatcaatagaacctggtgaaatgcagtatttgattaaatggaaaggttggtctcac
atccataatacctgggaaactgaagaaaccctgaagcaacagaatgttagaggaatgaaa
aaactggacaactataagaaaaaggaccaggaaacaaaacgatggttaaaaaatgcttct
ccagaagatgtagaatattacaactgtcagcaagagctcaccgatgatttacacaagcag
tatcaaatagtagagagaataattgcccattctaatcagaagtcagcagcaggctatcca
gattattactgcaagtggcaaggtctcccttactcggagtgcagctgggaagatggtgct
cttattgcgaaaaaattccagtcatgcatcgatgagtattttagcagaaatcagtcaaag
actactccttttaaagactgcaaggttttaaaacagagaccaagatttgttgcattaaaa
aagcaaccatcttacattggaggacatgatggtttagagctaagagattatcagctaaat
ggactgaactggttggctcactcctggtgcaaggggaatagttgcattcttgcagatgaa
atgggcctgggcaaaacaatacaaactatctcttttctgaattacttgtttcatgaacat
cagttgtatggccctttcttgctggtagtaccactttccactttgacgtcttggcaaaga
gaaatccagacgtgggctcctcagatgaatgcagtagtttatttgggagatattactagc
agaaatgtgataagaacacatgaatggatgcatctacagaccaaacgattaaaatttaat
atccttctgacaacctatgaaatattgttgaaagataagtcattccttggtggtctgaat
tgggcatttataggagtggatgaagcccatcgattaaaaaatgatgattcactcctgtac
aagacattgatagacttcaaatccaatcatcgtctccttattactggtacgcctctgcaa
aactctctgaaagagctttggtccttactgcacttcatcatgccagaaaagttttcttct
tgggaagattttgaagaggaacatggtaaagggagggaatttggatatgcaagtcttcac
aaagaacttgaaccatttctgttgagaagagttaagaaagacgtagaaaaatctctgcct
gccaaagttgaacagattttaagaatggagatgagtgcattacaaaagcaatactacaag
tggattttaacaaggaattacaaagccctaagtaaaggttcaaagggcagtacctcaggc
tttctgaatatcatgatggaacttaaaaagtgttgtaatcattgctacctcattaaacca
ccagatgataatgaattctataataaacaggaggccttacagaatttaatccggagtagt
ggaaagctaattcttctagacaaactgctgattcgcttaagggaacgtggcagcagagtg
cttatattctctcagatggtgaggatgctggacatcctagctgaatatttgaaatatcgt
caatttccctttcagagactagatgggtcaataaaaggggaactaaggaagcaagcgctg
gatcattttaatgcagaaggttctgaggatttctgctttttactttctactagagctgga
ggtctaggtataaacttggcatctgctgatactgtagtaatatttgattctgactggaac
cctcagaatgatctgcaggcacaggctagagctcataggattggacaaaagaagcaggtt
aacatttatcggctagtcactaagggatccgttgaggaagaaatcctggaaagagccaag
aagaagatggttttagatcatctagtgatacagagaatggacactacaggaaagactgtg
ctgcatacaggttctgctccttcaagctctgctccttttaacaaagaggaactgtcagct
atcttaaaatttggtgctgaagaactttttaaagaacttgaaggtgaagagcaggagcca
caggaaatggacatcgatgaaattttgaagagggctgaaacccgggaaaatgaatgtggc
ccattaagtgtgggagatgagttgctttcccagtttaaggttgctaatttctccaatatg
gatgaagatgatattgaactggagcctgaacaaaactcaaggaattgggaggaaataatt
ccagaggtccagcgaagaagattagaagaagaagaaagacaaaaggaactggaagaaatt
tacatgcttccaagaatgcgaaactgtgcaaaacagatcagctttaatggcagtgaaggg
agacggaggagcagaagatattctggatcagatagtgactctatctcagaaaggaaacgt
cccaaaaaacgtggaagaccacgaactattccacgggaaaatatcaaaggatttagtgat
gctgagattaggaggtttatcaagagttacaagaaatttgggggtcctcttgaacggttg
gatgcaatagctagagatgctgagctagtggataaatctgagatagaccttagacgactt
ggagagctagttcataatggatgtatcaaggctttaaaggacagctcatctggacaagaa
agagcaggtggcagacttggcaaagttaaaggcccaactttccgaatatcaggagtgcag
gtaaacgcaaaactagtcatctcacatgaagaagagctagcaccattgcaaaaatccatt
ccttcagatccggaggaaaggaagagatacaccataccttgtcatactaaggcagctcat
tttgatatcaattggggaaaagaagatgattccaatcttctaataggcatctatgaatat
ggatatggtagctgggaaatgataaaaatggatccagatctcaacttgacacaaaagatt
ctaccagatgatccagataaaaagccccaggccaagcagttgcagactcgtgcagactac
ctcataaaattactcaataaggatattgcgaggaaagaagcacaaagactttctggagca
ggaggctcaaagaggcgaaaaatgaagatcaagaagaacaaaatggtaaaagcaaaaatg
aaagcggaaataaaaagtgattcttcaccacctccttcagataaatctgaagaagaagcg
gaggatagcaaggatgaggtggcttcagtaaaacatcaaaataaaaagataaaaacagaa
aaagaaaatgaagaaaatcttgatgcagatcctggcatgaaaagggagacagatgaaaaa
agagagatgaaggaaaacaagagggatcttaaaaaggagaaaaaagaaaaagaggacaag
aaagaattaagggaaaaagacatgaaagaaaagagggaaagcaaagtaaaagattacagt
cagagagaaaaagaagcaaaggaagaaaaggcaaatgagtccaaatctgatagcaaagac
aaacccaagaaaacaccatctcctgatactcctgttcatataacagcaagtagtgaacct
gttcctatttctgaagaatctgaagagctggatcagaagacattcagtatatgcaaagaa
aaaatgaggcctgtcaaagcagctctgaagcagctggatagacctgagaaaggtctttca
gaaagagaacagttggagcatactagacagtgtcttatcaaaattggggatcatataact
gaatgcttaaaagaatacacaaatcctgagcaaattaaacagtggagaaaaaacttgtgg
atttttgtttctaaatttactgaatttgatgccagaaaattacacaaattgtataaacac
gcaattaagaaacgtcaagaaactcagcagtacaatgaccaaaacagcagcagtagcatg
aatactcatttgataagaaatcctgatgtggaacgtctgaaagaaaacacgaatcatgat
gatagcagcagagatagttattcctccgacagacacttaccacagtatcatgatcatcac
aaagacagacttcatggagatgcctataaaaaaagtgactctaggaaaagaccatattct
gcctttagcaatggaaaagatcatagggattgggatcactacaaacaggataatcgatac
tacagtgatggtaaacacagaaagctggatgaccacaggaacagagatcacaggtctaat
ctggaaggaagtttaaaagacagtcgaacccattcagatcatcggatacacttagatcat
cggtccagttcagactacagtcatcataaatcttcaagagactatagatatcattcagac
tggcaaatggaccacagagcttctagtagtggccccagatcgccactagatcaaagatct
tatgattcaagatctcccttaggacatagatctccttttgaacattcaacagatcacaaa
agtacacctgaacacatgtggaatagcaggaaaacatag
DBGET
integrated database retrieval system
