Sphaerodactylus townsendi (Townsend's least gecko): 125436229
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Entry
125436229 CDS
T08213
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04510
Focal adhesion
stow04517
IgSF CAM signaling
stow04518
Integrin signaling
stow04519
Cadherin signaling
stow04520
Adherens junction
stow04810
Regulation of actin cytoskeleton
stow04820
Cytoskeleton in muscle cells
stow05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125436229 (VCL)
04518 Integrin signaling
125436229 (VCL)
04519 Cadherin signaling
125436229 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125436229 (VCL)
04520 Adherens junction
125436229 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125436229 (VCL)
04810 Regulation of actin cytoskeleton
125436229 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125436229 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stow04812
]
125436229 (VCL)
04147 Exosome [BR:
stow04147
]
125436229 (VCL)
Cytoskeleton proteins [BR:
stow04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125436229 (VCL)
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125436229 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
125436229
NCBI-ProteinID:
XP_048359019
LinkDB
All DBs
Position
LG07:125374688..125511927
Genome browser
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPSAPAGDSGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQLTDQVADLRARGQGATPLAMQKAHQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQSWLADPHGGSEGEEHIRGIMAEARKIAE
LCEDPKERDDILRSLGEISALTAKLSDLRKHGKGDSPEARALAKQIATSLQNLQSKTNRA
VANSRPVKAAVHLEGKIEQAQRWIDNPTIDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLARCDCVEQLAAQLADLAARGEGESPQARTLAAQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKSAVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKFR
EAVKAASDDLSKTISPMVLDAKAVAGNISDPGLQKNFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLNQPMMI
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIHCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccacacccgcacgatcgagagtatcctggagccggtggcgcagcagatc
tcccacctggtcatcatgcacgaggagggcgaagtggacggcaaggccattccggacctc
accgcccccgtggccgccgtgcaagccgccgtcagcaacctggtccgggttggaaaagag
actgttcagacaactgaagatcagattttgaagagagacatgccgcccgctttcatcaag
gtggagaatgcttgcacgaaacttgtccaggcagcccagatgctccagaccgacccgtat
tccgtacctgctcgcgattatctcattgacggctcaaggggcatcctttccgggacctca
gacctgttgctgacgtttgatgaggcagaggtccgcaaaatcatccgtgtctgcaaagga
attctagaatacctcactgtggccgaagtggtagagacgatggaggacttggtgacctac
acaaagaacttggggccagggatgaccaagatggccaagatgattgacgagcgtcagcaa
gagctaactcaccaggagcacagagtcatgttggtgaactccatgaacacagtgaaggaa
ttgctgccagtcctcatttcagctatgaagatttttgtaacgaccaaaaattccaaaagc
caaggaatagaagaggccttgaaaaaccgcaacttcactgtggagaagatgagtgccgaa
ataaacgaaataatccgcgtgttgcagctcacatcctgggatgaagatgcttgggccagc
aaggacactgaagccatgaagagggcgttggccttaatcgattccaagatgaatcaggcc
aaaggctggctcagagaccccagtgctcctgcaggtgactccggcgaacaggccattagg
cagatcctggatgaagccgggaaagttggagagctttgtgcgggcaaagaacgtagagag
attctggggacctgtaagatgcttggccagttgaccgaccaagtggcagaccttcgagct
agaggacaaggtgctaccccgctagccatgcagaaggcacaccaggtgtcccaaggtctg
gatttactgaccgcaaaagtggaaaatgcggctcgcaagttggaagcgatgaccaattct
aaacaggccattgcaaagaaaatagatgcagctcagagctggctagctgatcctcacggg
ggcagtgaaggagaggaacatattcgaggaattatggctgaagcccggaaaatcgcagag
ctctgtgaagatcccaaggagagagatgatattctgcggtccctgggagaaatctctgct
ctgaccgctaagttgtcagacctccggaaacatggaaagggggactctccagaagcccgg
gccttagctaagcagatcgctacctcgctccagaatctgcagtcgaaaaccaaccgggcg
gttgcaaacagcaggccagtcaaagccgctgtccacttggaaggcaagatcgagcaagct
cagagatggatagacaatcccacaatcgacgaccgtggagtcggccaggctgctatccgg
gggctcgtggctgaaggtcgccgtctcgccaacgtcatgatgggcccttaccgtcaagac
ctgctggccagatgtgattgtgtggaacagctggctgcccagctggctgatctggctgcc
agaggggaaggggagtctcctcaagcaaggaccctcgctgcgcaactgcaggactccttg
aaggatctgaaatcaaggatgcaggaagccatgacccaggaagtgtccgacgtcttcagc
gacaccaccactcccatcaaactgctggccgtggcagccactgctcctccggatgcacca
aacagggatgaggtgttcgatgaaagagcagccaactttgagaatcatgccgctcggctt
ggtgccaccgcagaaaaagccgccgcggttggaacagcaaacaaaagtgccgtggaaggc
atacaagccactgtgaagtcagcgagggaactcacgcctcaggttgtatctgctgctcgg
attctcctacgaaacccggggaatcaagccgcttatgaacactttgagactatgaagaac
cagtggattgacaatgtagagaaaatgacaggactggtggatgaagccattgataccaag
tcactgttggatgcctcggaagaagccattaagaaagatctggataaatgcaaggttgcc
atggccaacattcagcctcagatgcttgtagctggagccaccagcattgcccggcgagcc
aaccggattttgttagtggccaagaaggaggtggaaaactcagaggaccccaagttccgg
gaagctgttaaggccgcctctgatgacctgagcaaaaccatttcgccgatggtgctggat
gctaaggctgtggctggcaacatttcggatcctggtttgcagaagaacttcctggattct
gggtatcggatcttgggagccgtggccaaagtccgagaagcttttcaaccccaggagccg
gacttccccccacctcctcctgacctcgagcagcttcacctcactgatgaactcgctcct
ccaaagccccccttgccagagggggaggttcctcctccccgaccccctcccccggaagag
aaggatgaggagttcccggagcagaaggcgggtgaggtgctgaaccagcccatgatgatt
gcggccaggcagcttcacgacgaagccaggaagtggtctagcaagggtaatgacatcatc
gccgccgccaagcggatggccctgctgatggccgagatgtcccgcctggtgaggggcggc
agcgggaacaagcgggccctgattcattgcgccaaggacattgcgaaggcttcggacgag
gtgacccggctggccaaggaggtggcgaagcagtgcacggacaagcgcatcagaaccaac
cttttgcaggtctgcgaacgcatcccgactatcagcacccagctcaaaatcctttccacc
gttaaagcgactatgttgggtcggactaatatcagtgacgaagagtctgaacaggcgact
gagatgttggttcacaatgcccaaaacctgatgcagtcggtcaaggaaaccgtccgagaa
gctgaggcggcttctattaagatcagaacagatgccgggttcactctacgctgggtcagg
aaaactccttggtaccagtag
DBGET
integrated database retrieval system
