Sphaerodactylus townsendi (Townsend's least gecko): 125436237
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Entry
125436237 CDS
T08213
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125436237 (DDX4)
Enzymes [BR:
stow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125436237 (DDX4)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125436237 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125436237
NCBI-ProteinID:
XP_048359034
LinkDB
All DBs
Position
LG07:28606658..28646759
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AA seq
720 aa
AA seq
DB search
MDDEDWDTEIPDHASGGLGKGGLTASQPRFQALGSLPARANETSCVFSQSIKPDAGNDPS
RGFQCMQDSGWPTGSGGVSGKQNGEEKPTGGFGSRRSFGNRGPSGNLFEERKSTGFGRAV
EEGGDDEDNQSHTGFFRRGGMSNGSDARRGGRGPTRGGRGGYGLFTNNDCEMNDARPHSG
FKREGFGASSGDSANRGRGGFRDRGGYKGSNEEVIGGAGKSMWKSDGDKEGGEPAAPKVT
YIPPPPPDNEDAIFAHYQTGINFDKYDNILVEVSGHDCPAAILTFEEAGLCQTLSKNIAK
AGYSKLTPVQKHSIPIVLARRDLMACAQTGSGKTAAFLIPILEQMMQDGITATQFKEQQE
PECIIVAPTRELVNQIFLESRKFAHGTCIRPVVVYGGTQTIHSIRQVMQGCNILCATPGR
LLDIIGRERIGLSKLRYLVLDEADRMLDMGFGPEMKRLISSPGMPPKDKRQTLMFSATFP
EDIQRLAGEFLKTEYLFVVVGQVGGACSDVQQTILQVSQYDKKDKLVEILNSIGDKRTMV
FVETKKKADFFAALLCQENIKTTSIHGDREQREREEALCDFRSGRCPVLVATSVAARGLD
IENVHHVINVDLPSTIDEYVHRIGRTGRCGNLGKAISFFDPLADSAVAQPLVKVLADAQQ
EVPSWLEEIACSSCAVGFSNPRGNMFASVDSRKFSQGFQSKEHSGGFVASNTSAADESWD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaggattgggacactgaaattccggaccacgccagcggcggtttaggaaaa
ggaggcttgaccgcttcccagcccaggttccaggcactgggcagcttacctgcaagagcg
aatgaaacctcatgtgttttcagtcaaagcataaaaccagatgctggtaatgatcccagc
agagggtttcaatgtatgcaggattctggatggcctactggaagcgggggtgttagtgga
aaacaaaatggagaagaaaaaccaacgggtggatttggtagtagacgcagttttggaaac
cgaggtccatcaggaaatctatttgaagaaagaaaaagtacaggttttgggagagctgtg
gaagaaggtggtgatgatgaagacaaccagtcacatacagggttcttcaggagaggaggt
atgagtaatggcagtgatgcacgtaggggtggaagagggccaactagaggtggccgagga
ggatatggactatttacaaacaatgattgtgagatgaatgatgcaagaccacattctggt
ttcaagagagaggggtttggtgcttcttcaggtgattctgcaaatagaggaagaggagga
tttagagacagaggaggttacaagggaagcaacgaggaagtaattggaggtgctgggaaa
agtatgtggaaatcagatggtgataaagaagggggtgagcctgcagctccaaaggtgaca
tatataccaccaccaccaccagacaatgaagatgctatctttgcacattaccagacaggg
ataaactttgacaaatatgataacatccttgtagaagtgtcgggacatgactgcccagct
gcaattctgacctttgaagaagctggtctctgtcaaacattatccaagaatattgctaag
gctggatattctaaacttacccctgtgcagaagcatagcattcctattgtgctggcaagg
cgtgatttaatggcatgtgcccaaacaggatctggaaagacagcagcgtttctaatacca
attttggaacagatgatgcaagatggaattactgccactcagttcaaagagcagcaagaa
ccagaatgtataatagtagctcccacaagagaacttgtaaatcagatcttccttgaatcc
agaaaatttgcccatggaacttgtataaggccagttgtggtttatggaggtacacagaca
attcattcaattcgccaggtaatgcaaggctgtaatatattatgtgctactcctggaaga
cttctggatatcataggcagagaaaggattgggctgagcaaacttagatatttggtttta
gatgaagcagaccgtatgctggatatggggtttggcccagagatgaagaggttgatttcc
agtccaggaatgccaccaaaggataaaaggcaaacattaatgttcagtgcgacttttcct
gaagatattcagaggctggctggagaatttttgaagacagaatatctttttgttgtcgtt
ggacaagtgggtggtgcttgcagtgatgttcagcagactatacttcaagttagtcagtat
gacaagaaagacaaactcgttgaaattctcaacagcataggtgataagcgaacaatggtg
tttgtagaaactaagaaaaaggcagatttttttgctgcccttctttgccaagaaaacata
aaaacaacaagtattcatggtgatcgagagcagagagaacgagaagaagctctttgtgat
tttcggtctggaagatgtcctgtccttgttgcaacatcagtggccgccaggggtctggat
attgagaatgttcatcatgtcataaatgtcgatcttccttccacaatcgatgaatatgtt
cacaggattgggcggactggacgttgtggtaacctaggcaaagcaatttctttctttgat
ccccttgctgacagcgctgttgcacaaccccttgtcaaggtgcttgcagatgctcaacag
gaagtcccctcatggctagaagaaatagcttgtagttcctgtgcagttggttttagcaat
ccaaggggaaatatgtttgcttctgttgattctagaaagttttcacagggtttccaaagc
aaagaacacagtggaggatttgttgcatcaaatacaagtgcagccgatgagtcatgggat
taa
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