Sphaerodactylus townsendi (Townsend's least gecko): 125436299
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Entry
125436299 CDS
T08213
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow02010
ABC transporters
stow04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125436299 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125436299 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stow02000
]
125436299 (ABCA1)
Transporters [BR:
stow02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125436299 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
125436299
NCBI-ProteinID:
XP_048359136
LinkDB
All DBs
Position
LG07:complement(106498585..106601397)
Genome browser
AA seq
2267 aa
AA seq
DB search
MAFWTQLGLLLWKNFTCRRRQTFQLLIEIAWPLFIFFILTSVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGIVGNFNKSIVYRLFSDAKRLLLYSQKDT
SIKDAQKLVGKLQTAGKSASGVKLRDFLVANETFSDFLHWNTSLPRFAVDEILNSKVNLE
RIITSGYQMRMKDLCNSTKLSEFLMISNPAVAMASDALICLMPKDKLASAEKVFQANLDI
VKPFMKGITANSTLQGLKEAAETLLESLGKLLKELVTMKSWSDMRQEVLFLSNVNHTSSS
AEIYQAVSRIVCGHPEGGGLQIKSLNWLEDNNYKAIFGVNSTDEEGADFYDNSTTPYCND
LMKTLESNPLSRIIWRALKPLLVGKVLYTPDTPATRAVMSEVNKTFQELGVFRDLGGMWE
EIRPRILTFMEKSQEMDVVRTLLKNKDLWHHYLEGSNWTVEDVAVFLARYPEDVQPVNGS
TYSWRDAFNETDRAVMTISRFMECVNLDKLEAVPNEVRLINKSMELLDQRRFWASIVFPE
VAPGSTKLPHHVKYKIRMDIDNVERTNKIKDGFWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRSLTGSEKKTGVYIQQMPYPCYVDDIFLHVMSRSMPLFMVLAWIYSVALIIKGIV
YEKEARLKETMRIMGLNNGILWLSWFISSLIPLLLSAGLLVLILKNGNLLPYSDPSVVFV
FLSIFGVVTIMQCFLISTLFSRANMAAACGGIIYFTLYLPYVLCVAWQDYVGFSLKIFAS
LLSPVAFGFGCEYLSLFEEQGVGVQWENILQSPVEDDSYNLTTSCYMMMLDALLYAIMTW
YIESVFPGQYGIPRPWYFPFLKSYWCGEESEQHQLPSIRTGSSEICVEEEPSHLSLGVSI
QSLVKVYRDGKRRPFRMALITPLNFSVXRRQIILPSWGSPPTRAGKTXPTSILTGLFPPT
SGTAFILGKDIRSELSSIRQNLGVCPQHNVLFDELTVEEHIWFYARLKGLSEKLVKTEMA
QMATDVGLPHKLKSKTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWEL
LLKYRHGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKD
VDSSLSSCRMSDNLKSXLFCNXDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIMKHVP
EAKLVEDIGHELTYVLPYQAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVA
EDNGVDAETSDGTLPARRNRRPFGDRQSCLRPFTEDDALDSNDSDIDPESRETDLLSGMD
GKGSYQMKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALMFSLIVPPFG
KYPSLELQPWMYDEQYTFISNDAPEDAGTQELLNTLLGEPGFGTRCMKGYSIPDTPCSEG
EPDWTISPVPESVMEIFQNGNWTMENPSPSCMCSNDKSKKMLPTCPPGAGGLPPPQRIQN
TMDILQNLTGRNISDYLVKTYTQIIGKSLKSKHWVNEFRYGGFSLGASSSLVLPPKQEVN
DAIRQVKKILELAKGSSGERFLNNLGSFMKGLDTNNNVKVWFNNKGWHAIGSFLNVVNNA
ILRANLKEGEDPSTYGITAYNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVSKAKHLQFISGVKPFIYWLANFVWDMCNYVVPATLVIIIFICFQQKAYVSS
TNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFT
NNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRN
LFAMAVEGVVFFLITVLIQYRFFIKPRSVSAKLPPVHDEDEDVNRERQRIISGGGQSDIL
EIKELTKTYRRKQKAAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGDAFL
KGNSILSNIQEVHQNMGYCPQFDAITELLTGREHLEFFALLRGVPEKEVCKVGEWAVRKL
GLVKYAEKCAGLYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCGLSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDL
KPVQDFFELAFPGSVLKEKHRSMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTT
LDQVFVNFAKDQSDDDHKDLSLHKNQTVVDLAVLSFLQDQKVKESYV
NT seq
6804 nt
NT seq
+upstream
nt +downstream
nt
atggcattctggacgcagctggggttgctgctatggaagaatttcacctgtcggagaaga
cagacgttccagctgctgattgaaattgcctggcccctgtttatcttctttatattgaca
tctgtgagactatcttatccgccctatgaacaacatgaatgtcactttccaaataaagcc
atgccttcagctggaacattgccttgggtccaggggattatctgtaacgccaacaatcca
tgcttccgctacccaacacctggggagtcaccgggcattgttgggaatttcaacaaatct
attgtttaccgattgttctcggatgccaaacggttgctattgtatagccagaaagacacc
agcattaaggacgcacagaaactagtgggaaagctacagacagccgggaagtctgcgtca
ggagtcaaactccgggatttcctggttgccaatgagacgttctctgacttcctccattgg
aatacttccctaccaagatttgcagtggatgaaatactgaactctaaggtcaatcttgaa
aggatcattacatctggctaccagatgaggatgaaagacctttgcaattcaacaaagctg
tctgagtttcttatgatctcaaacccagcagtagccatggccagtgatgcgttgatttgc
ctcatgcccaaggataaacttgcttctgcagagaaggtgttccaggctaacctagacatt
gtaaagccatttatgaaagggatcaccgccaactccactttacagggtctgaaagaagct
gcagagactttgttggagagcctcggaaagctcctgaaagagcttgtgaccatgaaaagc
tggagtgacatgaggcaggaagtattgtttttgagcaatgtgaaccacacgagttcttct
gctgaaatctaccaagcagtgtcccgtattgtttgcggccatccagaaggagggggattg
caaatcaagtctctcaattggttggaagacaataattacaaagccatctttggtgtcaat
agcacagatgaagagggagctgatttctatgataactccacaacaccctactgcaatgac
ctcatgaagactctggaatccaatccactttcccgcattatatggagagccttgaagcct
ttacttgtaggaaaagtcttgtatacacctgacacaccagcaacgagggcagtgatgtcc
gaggtaaacaagacattccaggagctaggcgtcttccgtgatctcggagggatgtgggaa
gagataagaccgaggatactgactttcatggagaaaagccaggaaatggacgtggttcgg
actttactgaaaaacaaggacctctggcaccactacttggaaggttcaaactggacagtc
gaggacgttgctgtgttcttggcaagatacccagaggatgtccaaccggtgaatggctca
acctactcgtggagggatgctttcaatgagacagatcgtgctgttatgactatttcccga
ttcatggagtgtgtcaatttggacaagctggaagctgtgccaaatgaggtgcgtcttatc
aacaagtccatggagctgctggaccagaggagattttgggcaagcatcgtcttccctgaa
gttgctcctggcagtacaaagttgccccaccatgtcaagtacaagatacggatggacata
gacaatgtcgaaaggacaaacaaaattaaggacgggttctgggacccaggtcctcgagct
gacccctttgaagacatgcgctatgtctggggaggctttgcatacctacaggatgtggtg
gagcaagcaatcatccggtctctaacaggctccgagaagaaaacaggcgtgtatatccag
cagatgccgtacccatgttatgtggatgacatattcctgcatgtcatgagccgatcgatg
cctcttttcatggttctggcttggatttactctgtggcattaatcatcaaagggatcgtg
tatgagaaggaagcccgactgaaagagaccatgaggatcatgggccttaacaacggcatc
ctttggctcagctggttcatcagcagcctcatccctctcctcttgagcgctgggctcttg
gtgctgatcctcaagaatgggaatctgctgccctacagtgaccccagcgtggtgtttgtc
ttcctgtccatctttggtgtggtgaccatcatgcagtgcttcctcatcagcactttgttc
tcgagggccaacatggcggcagcttgcggaggaattatctacttcactctctacttgccc
tatgttctgtgcgtcgcctggcaggattatgttggcttctctctcaagatatttgctagc
ctgctttctcctgtggcctttgggtttggctgcgaatacctctccctgtttgaagagcag
ggcgttggagtgcagtgggagaacatccttcaaagccccgtagaagacgacagctacaac
ttgaccacttcttgttacatgatgatgttggatgctttgctgtacgcgatcatgacttgg
tacattgagtccgtcttcccaggccagtatggcattcccaggccgtggtacttccccttc
ttgaagagctattggtgcggtgaagaatccgaacagcatcagctcccttctatccgcacg
gggtcatctgaaatctgtgtagaagaagagccaagccatctcagccttggagtatccatt
cagagtctggtgaaagtttatcgtgatggcaagcgtcggccatttaggatggccctcatc
acgcctttgaatttctccgtatgaaggcggcagatcatcctcccttcctggggctcaccg
ccaacgcgagccgggaaaacgtaaccaacgtccatattgacgggattgtttccaccaacc
tccggcacggcttttatcctgggcaaagacattcgctctgaactcagcagcattcggcag
aatctgggtgtctgccctcaacacaacgtcttgtttgatgagctgacggtggaggagcac
atctggttttatgcacgcctgaagggactatcagaaaaactggtgaaaacagagatggcg
caaatggctacagatgttggcctgcctcacaagctgaaatcaaagacgagcaaactctcc
ggtggcatgcagaggaagctttcggtcgcgctggcctttgtaggtggctccaaagtggtc
atcctggatgagccgacggcaggcgtcgatccttactctcgccgagggatttgggagctg
cttttgaaatatcgccacggccgcactatcattctctccacgcaccatatggacgaggca
gatatcctcggagaccggatagccatcatatctcatggcaaactgtgctgcgttggctct
tcgctgtttctgaagaatcagcttgggacaggctactatctgaccttagtcaaaaaggac
gtggattcttcactgagctcttgccgaatgtcagataatttaaaaagttaactcttttgt
aactaggatgacagcgtctcccagagcagctccgatgctggactcggcagtgaccacgaa
agtgacactttaacaatcgatgtgtctgcgatctccaatcttatcatgaagcatgtccct
gaagcaaagctggtagaggatattggccacgagctcacctacgttttgccgtaccaagcc
gccaaggagggtgctttcgtggagctgtttcacgagatcgacgaccggctctctgacctg
ggcatttccagttacggcatttctgagaccactttggaggagatatttctcaaagtggca
gaggataatggcgtggatgcagagacctcagatggcactttacctgctagaagaaatcga
cgtccctttggagaccggcagagctgcctccgcccattcacagaagatgatgctttggac
tccaacgattctgacatagatccagaatcccgagagacagacctgctgagtgggatggat
ggcaaaggatcctaccagatgaagggctggaagctgactcaacagcagtttgtcgctctg
ctctggaagaggctcctgatcgccaggcgcagcaggaaggggttctttgcccagattgtt
ctccccgctgtctttgtttgcatcgctctcatgttcagtctgattgtgccaccctttggt
aaatatcccagcttggaactgcaaccgtggatgtatgatgagcagtacacatttatcagc
aatgatgctccagaagacgctgggactcaggaacttttgaacactctcctgggtgaacct
ggttttgggactcgctgtatgaaaggatactccatcccagatactccttgctctgaggga
gaaccagactggaccattagccccgtgcccgagtcggtcatggagatcttccagaatggc
aactggacgatggagaatccttccccatcctgcatgtgtagcaatgacaagagcaaaaag
atgcttcccacgtgtcccccaggggccggtgggctgccgcctccccagagaatacagaat
acgatggacatcctccagaacttaacaggacgcaacatctctgattacctggtgaagact
tacacgcagatcattgggaaaagtttgaagagtaagcactgggtgaatgaattcaggtat
ggaggattttcactgggagctagtagttctctggtgcttcctccaaagcaagaagtgaat
gacgccatccgacaagtgaagaagattttggaactggccaagggcagttctggagaacgt
ttccttaataatctggggagcttcatgaagggactggacacaaacaataacgtcaaggtg
tggttcaataacaagggctggcatgcaattggctcctttctcaatgtggtcaacaacgca
attctccgggctaacctgaaggagggagaggaccccagtacctatggcatcacagcttac
aaccacccgctgaacctcaccaagcagcagctgtctgaagttgccttgatgaccacctca
gtggacgttttggtctccatctgcgtcatctttgccatgtcctttgtcccggccagcttt
gtggttttcttgatccaggagcgagtcagcaaggccaagcacttgcagttcatcagtggg
gtgaagccatttatctactggctggccaactttgtctgggatatgtgcaactatgtggtt
cctgccactttggtcattatcatcttcatctgcttccaacagaaggcctacgtgtcttca
accaatctgccggtgcttgctcttctcctcttgctctatgggtggtccataactcctctc
atgtacccagcatcctttgtgttcaagattcctagcactgcatatgtggtactgaccagt
gtgaacctcttcattgggatcaacgggagcgtggccacttttgtccttgagcttttcacc
aacaataagctgaacaacatcaatgacatcctgaagtcggtctttctcatcttcccccac
ttctgtctgggccgtgggttgatcgacatggtgaaaaaccaagccatggcagatgctctg
gaaaggtttggtgagaaccgctttgtttcccccctctcctgggacctggtgggacgcaac
ctttttgccatggctgtggaaggtgtcgtcttcttcctcatcacggtgctcattcagtac
aggttctttatcaaacccaggtctgtctctgccaagcttccacctgtgcatgatgaagat
gaggatgtgaacagagagaggcagaggatcattagcggtggtggacagagtgacatcttg
gaaatcaaggagctgacgaagacatacagaaggaaacagaaagcagctgtggacaggatc
tgtgttgggattccacctggggagtgctttggtctccttggcgtgaatggagctggcaaa
tcctctactttcaagatgttgactggagatactgatgttacaggaggggatgcttttctg
aagggaaacagcatcttgtcaaacatccaagaggtccatcagaatatgggatactgccct
cagtttgatgccattactgaactgctgacagggagagaacacctggaattctttgcattg
ttaagaggcgttcctgagaaggaggtttgcaaggttggagaatgggctgttcggaaactg
ggacttgtgaagtatgcagaaaaatgtgccggcttgtacagtggcgggaacaagcgcaag
ctttccacagcaatggccctgattggggggcctcccgtggtgttcctggatgagccaact
actgggatggatcccaaagcacgtcgtttcctttggaactgtggcttgagcatcatcaaa
gagggaagatcagttgtcctcacgtcccacagcatggaagagtgtgaggccctgtgcacc
cgaatggcgatcatggtcaacgggcggttcaggtgcctgggcagcgttcagcacctgaag
aacagatttggtgacggctacaccatagtggtgcggatagcaggggcaaacccggacttg
aaacctgttcaggacttctttgagcttgcctttcctggcagcgtgttgaaggagaagcat
cgcagcatgctgcaatatcagctcccgtcctctccgtcttcgctggctaggatatttagc
atcctctcccagaacaaaaagagactccacatagaagactactccgtttcccagaccaca
cttgaccaagtatttgtaaactttgccaaggaccaaagcgacgacgaccacaaagacttg
tctttgcacaaaaatcagactgtggtagatcttgcggttctgtcctttttacaagaccag
aaggtgaaagaaagctacgtatga
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integrated database retrieval system
