KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125436379
Entry
125436379         CDS       T08213                                 
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03420  Nucleotide excision repair
stow04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125436379 (RAD23B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    125436379 (RAD23B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:stow03051]
    125436379 (RAD23B)
   03400 DNA repair and recombination proteins [BR:stow03400]
    125436379 (RAD23B)
Proteasome [BR:stow03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    125436379 (RAD23B)
DNA repair and recombination proteins [BR:stow03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      125436379 (RAD23B)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD Rad60-SLD_2 UBA_3 Crinkler UBA_2 DUF1421 Dsc3_N UBA_9
Other DBs
NCBI-GeneID: 125436379
NCBI-ProteinID: XP_048359271
LinkDB
Position
LG07:107823366..107869193
AA seq 421 aa
MQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDIALK
EYKIDEKNFVVVMVTKPKAASASPAPSPATTQQSNTVSSSTVDAAAPTPAPAPAPASGPV
TAPAPATPTPPAVACEPAPVSVPVEEKPAEKPLETPADPSPLPTDSPADDTSRSNLFEDA
TSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDERESCMTG
FTVGCKLRFGASPSSAVAAAAATTTTTTTTTTSSTGGHPLEFLRNQPQFQQMRQIIQQNP
SLLPALLQQIGRENPQLLQSSHAPQQISQHQEHFIQMLNEPVQESGQGGGGSGGGGGGGI
AAEAGSRHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDE
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcagatcacgctgaagacgctgcagcagcagaccttcaagatagacatcgatcccgag
gagacggtaaaagcgctgaaagagaagattgaatcagaaaaagggaaagatgcttttcct
gtagcgggccaaaaattaatatatgcaggtaaaatacttaatgatgatattgctcttaaa
gaatacaagatcgatgagaagaactttgtggtggttatggtgacaaaacccaaagcagca
tcagctagtccagctccatcaccagctacaactcagcagtcaaatactgttagctcttct
acagtagatgctgcagccccaacaccagcacctgcccccgcacctgcttctggtccggtt
acagctcctgcaccagctactccaacaccacctgcggtcgcttgtgagcctgcaccagta
agtgtccctgtagaagagaaaccagcagagaagccattagagacaccagctgatcccagt
ccactacctacagacagtccagcagatgatacttcacgatcaaatctctttgaagatgct
acaagtgcgcttgtgacaggccagtcctatgaaaatatggtgaccgagatcatgtcgatg
ggatacgagcgagagcaagtgattgcggcactaagagctagcttcaacaatcctgacagg
gcagtggagtacctactaatgggtatccctggggatgagagagagtcgtgcatgactgga
tttaccgttggctgcaagctacgctttggtgcctctccatcctcagcagtagcggcggcg
gcagcaaccactacaacaacaacaactactactactagttctacaggaggacatccactt
gaatttttacgaaaccaacctcagttccagcagatgaggcaaattattcagcagaatcca
tctcttttgcctgccttgttacagcaaataggacgggaaaatcctcagctattgcagtcc
tcccatgcaccacagcaaataagccaacaccaagagcattttattcagatgttaaatgag
cctgtgcaagaatcaggtcaagggggtggcggcagcggtggcggcggtggcggcggaata
gcagctgaagctggaagccgtcacatgaactatattcaagtaacacctcaggaaaaagaa
gctatagaaaggttaaaggcgctagggttccccgaaggacttgtgattcaagcgtatttt
gcgtgcgagaagaatgaaaatttggcagccaacttccttctacaacagaactttgatgaa
gattga

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