Sphaerodactylus townsendi (Townsend's least gecko): 125436419
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Entry
125436419 CDS
T08213
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04137
Mitophagy - animal
stow04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125436419
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125436419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125436419
03009 Ribosome biogenesis [BR:
stow03009
]
125436419
04131 Membrane trafficking [BR:
stow04131
]
125436419
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stow04147
]
125436419
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125436419
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125436419
Membrane trafficking [BR:
stow04131
]
SNARE
SNARE associated proteins
Others
125436419
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125436419
Exosome [BR:
stow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125436419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
125436419
NCBI-ProteinID:
XP_048359348
LinkDB
All DBs
Position
LG07:3128101..3157037
Genome browser
AA seq
806 aa
AA seq
DB search
MASGTDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWQDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIREAIESEIKRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGSSGGTVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggggaccgattccaaagctgatgacttatccactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagcaattaacgaggacaacagcgttgtgtca
ttgtcccaggccaagatggacgaactgcagctgttccgaggagacacagttctgctgaaa
gggaagaagaggagagaggccgtgtgcatcgtcctgtctgacgacacctgctccgatgag
aagatccgcatgaaccgggttgtgcgcaacaacttgagggtgcgccttggagatgtgatc
agcatccagccttgtccagatgtcaagtatggcaaacgcatccatgtgctgcctattgat
gacacagtggaagggatcactgggaacctgtttgaggtctacctgaagccgtacttcttg
gaagcatacagaccaatcagaaaaggggacatcttcctggtgcgtggagggatgcgcgct
gtggagtttaaggtggtggaaacagacccaagcccttactgcatagtagctccagacacc
gtcatccattgtgagggggagcccatcaaacgagaggatgaagaggaatctctgaatgaa
gtgggctatgatgacattggcggctgtcgcaagcagctggctcagatcaaagagatggtg
gagcttcctctcaggcacccggctctcttcaaggccatcggggtgaagcctccccggggc
atcctgctgtatggtccgccagggacagggaagaccctgattgctcgagccgtggccaat
gagaccggggcgttcttcttcctcattaatggtcctgagatcatgagcaagctggcgggc
gagtccgagagcaatctgcggaaggcctttgaagaagccgagaagaacgcccccgccatc
atcttcattgatgagttggatgccattgctccaaagagagagaagacgcacggcgaggtg
gagcggcgcattgtgtctcagttactgacgttgatggatggcctgaagcagcgagcgcat
gtcatcgtcatggctgctaccaacagaccgaacagcattgacccggctctacggcgattt
ggtcgctttgacagggaggtggatattggcattcctgatgcgactggtcgcctggagatc
ttgcagatccacaccaagaacatgaagttggctgatgatgtagatctagagcaggtggcc
aatgagacccacggccacgtcggtgcagatttggctgcgctgtgctcggaggccgccctg
caggccatccggaagaagatggacctcattgacctggaggacgagaccatagatgccgaa
gtgatgagctcactggcagtcacaatggacgacttcaggtgggctctgagccagagcaac
ccctcagctttgcgggagaccgtggtggaggtgccccaggtgacctggcaggacatcgga
ggcttagaagatgtcaagcgagaactccaggagcttgtgcagtatccagtggagcaccct
gacaaattcctcaagtttggcatgaccccctccaaaggggtgctgttctatgggcctcct
ggctgtgggaagaccttgctggccaaagccattgccaacgaatgccaggccaacttcatc
tccatcaagggcccggagttgctcaccatgtggtttggagagtcagaggccaacgtgcgc
gagatcttcgacaaggcccgccaagcggcgccgtgtgtgctgttcttcgatgagctggac
tccatcgccaaggcccgtggtgggaacatcggagacgggggcggagctgctgacagagtc
atcaaccagatcctgacagagatggacggcatgtcgaccaagaagaacgtcttcatcatc
ggtgccaccaaccggccagacatcattgacccggctatcctgcgcccgggacgcctcgac
cagctcatctacatccctctgccggacgagaagtcccgtgtggccatcctcaaggccaac
ctgcggaaatcgcctgtggccaaggatgtggatttggaattcctggctaaaatgaccaat
ggcttctcgggagctgatctcacagagatttgccagcgggcctgcaagttggccatccgg
gaggctattgagagcgagatcaagcgggaacgagagaggcagaccaacccttcggccatg
gaagtagaggaggatgaccccgtacctgagatccggcgagatcactttgaggaggccatg
cgcttcgcccgacgctcagtcagcgacaacgatattcgcaaatacgagatgtttgcacag
accctgcagcagagccggggcttcggcagcttcagattcccatcaggtaaccaagggggt
gctggacccagccaaggcacgggaggcagcagcggtgggaccgtttacagtgaagacaac
gacgacgatctgtatggttaa
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