Sphaerodactylus townsendi (Townsend's least gecko): 125436520
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Entry
125436520 CDS
T08213
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125436520 (TAF1C)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
125436520 (TAF1C)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
125436520
NCBI-ProteinID:
XP_048359549
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Position
LG07:complement(2597078..2600615)
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AA seq
529 aa
AA seq
DB search
MCQRDSCSPPPPRMSLLRLQRLHEDRQTMFFRDPSPWRGSDFTAHPLVLSYADRTGLMGI
DRRMPSGHPVEFFKVGSEAECQRGERLVQARHLGQAEPFHHLIATQFSVYVLDERVPLVP
VLRWRHMMRRPPLFSHLTPGGGPQRTHKLLLGTHHSQELLLVQYAGGSSAPCQLWGPPQK
LSSLSDCLPLFPLQVPSVLSALEQRLTQPTTGITAAVGRQGQRESLLIFQLSQAGDLFYQ
PLEHQEAAEDAPLEPETTLGPLQDAPAATLGPAAAASYRRWLKGSWHSGQWAPVMPQPLC
ATSRRRAFRRLFSQRKLQEAPATVAAFQGVRQRLHEAMRDQRLLCPWAPRQASPAPLPPK
PVGRRSELQERLLASWAGGWAGWWEGKLGLTEAQKKRALREQRRRLKRARGPPSLASSFT
SSLSDFSQGSSAGTSGIWAAPPAASQEDSLPGSQDSGLLLSSQTLAKRGIPQERRRTLRH
FLAVLEQPPEPPEDLCQARSASQRSLPPSQGSQASLRSQPPRKRPLMGF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtgccagagagattcctgcagccccccccccccccgcatgtcccttctcaggcttcag
cggctgcacgaagacaggcagaccatgttcttccgcgacccctccccttggcgtgggagc
gacttcactgcccacccgctggtactgagctacgccgaccgtacagggctgatgggcatc
gaccgcaggatgccttctggtcaccctgtggagttcttcaaggtggggagcgaagcagag
tgccagcgcggggagcggctggttcaggccagacacctgggccaagcggagcccttccat
cacctcatcgccacgcagttctccgtttatgtgctggacgaacgagtcccgctggtgccc
gttctccgctggcggcacatgatgcgcaggcctccgctgttcagccacctcacgcccggc
ggggggccgcagcgcacccacaagctcctcctgggcacccaccacagtcaggagctgctg
ctggtgcagtacgcaggtggcagcagcgccccgtgccagctatggggccctccccagaag
ctctcctccctcagcgactgcctccccctcttcccccttcaggtgccctctgtcctcagt
gccctcgagcagcgcctgacccagcccaccactggcatcacagccgccgtgggccggcag
ggccagagggaatccctgctcatcttccagctatcccaggccggggacctcttctaccag
ccccttgagcaccaggaggcagccgaggatgccccgctggagccagagacaaccctgggc
cctctgcaggatgctccagccgccaccctcggccctgctgcggctgccagctaccgtcgt
tggctcaagggctcttggcacagtgggcagtgggcaccggtcatgcctcagcccctgtgc
gccactagcaggcgccgtgccttccgccgtctcttcagccagcggaagctgcaggaggcg
cctgcgaccgtcgctgcctttcagggcgtccgccagcgcctgcacgaggccatgcgggac
caacggctcctgtgcccctgggcgcccagacaagcctcgcctgctcccttgcccccgaag
ccggtgggccgccggtccgaactgcaggagcggctgctggcctcctgggccgggggctgg
gctggctggtgggagggcaagctgggcctgacagaggcgcagaagaagcgggccctccgg
gagcagcggcgccggctgaagagggcacgaggccccccgagcctggcctccagcttcacc
tcctccctcagcgacttctcccagggctcgagcgccggcaccagcggcatctgggcagca
ccccctgctgcctcccaagaggactctctgccaggctcccaggactcggggttgctgctg
tccagccagaccctggccaaacggggcatcccccaagagcgccgccgcaccctgcgccat
ttcctggctgtcctggagcagccgccagagccccccgaggacctctgccaggcacggtcg
gccagccaacgctcactgcccccttcgcagggctcacaggccagcctgcgctcacagccc
cctcgcaagcggcccctcatgggcttctga
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