Sphaerodactylus townsendi (Townsend's least gecko): 125436626
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Entry
125436626 CDS
T08213
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stow03041
]
125436626 (ZFR)
Spliceosome [BR:
stow03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125436626 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
125436626
NCBI-ProteinID:
XP_048359757
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All DBs
Position
LG07:complement(19883280..19923982)
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AA seq
1067 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHTGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAESY
YQTAPKSAYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVP
SYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTG
TTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKAS
QNTTSNNSSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
NVVTQVTSSTSASSSKPTAVSSNIVTSSSAVNSSVASSAVKILTPSANVLLNAASNKTTI
VPTNLTVKKISTPKINFVGGNKLQTTGSKVDELKAVENVKTAPSVATLQTQEIKPDTSSE
PVTPTSLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRRHR
LQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEIRRYEEDMY
WRRMEEEQHHWDDRRRIPEGGYPHGPPGPLGLLGVRPGMAPQPQGPAPLRRPDSSDDRYV
MTKHAAIYPTEEELQAVQKIVSITERALKLVSDNMTDNDKTKTKDADDKKEGTKDRALKG
VLRVGVLAKGLLLRGDRNVNLVLLCAEKPSKTLLTRIAENLPKQLAVISPEKYEIKCAIQ
EAAIILNSCVEPKMQVTITLTSPVIREENMRDGDVTSGMVKDPPDVLDRQKCLDALAALR
HAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDA
LRRVFECISSGIILKGGPGLLDPCEKDPFDTLALMTDQQREDITSSAQFALRLLAFRQIH
KVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactacttcggattcacccacaccggggcggctgcccagtat
agccagcagcctgcttcgggtgtagcctattcccatccaactacggttgcaagctatact
gtgcatcaggcgccagtagctgcgcacacagttaccgctgcctatgccccagcagctgca
acagttgcagtagcccggcctgctccggtggctgttgcagctgctgcaacagctgcagcc
tatggaggctaccctacggcacatacggcaacagattacggctatacacagaggcaacaa
gaagctcccccgccgccacctcctgttaccacgcaaaactaccaggactcgtattcgtat
gttagatccactgctccagctgtggcgtacgacagcaagcaatattatcaacaacccaca
gccactgcagccgctgtggcagctgctgcccaaccacagccttctgtagctgaatcgtac
taccagacagctccaaaatctgcctatagccaaggagcaacacagtatactcaagcccag
caaacccgacaagtgactgccataaaaccagccactccaagcccagctaccaccaccttc
tccatatatcccgtatcttccactgtgcaaccggtcgcagctgctgctacggttgtcccc
tcgtatacccagagtgctacatacagtacaacagcagttacttactctggtacctcttac
tctggctatgaggctgccgtgtattcagctgcatcatcttattaccagcagcaacagcag
cagcagaaacaagcagcagcggctgcggctgctgccgccgccacagccgcttggacaggg
accacctttacgaaaaaggcaccattccaaaacaaacagttgaaaccaaaacaacctccc
aaaccaccccagatccattactgtgatgtttgtaagatcagctgtgctggaccacagact
tacaaggaacatctggaaggacagaaacataaaaagaaagaagccgcactgaaagcatcc
cagaataccaccagcaacaattcgtctgctcgtgggactcaaaaccagttgcgctgtgaa
ctttgcgatgtgtcttgcactggagctgatgcctatgctgctcatatccgtggagctaag
catcagaaagtggttaagctgcacactaagcttggaaaacccattccttccactgaacca
aacgtggtcacccaggtgacgtcttcaacatctgcttcctcttcgaaaccaacagctgtc
tcttcgaatattgtgaccagcagcagtgctgtgaattcttccgttgcatcttctgcagtg
aaaattctcactccctctgccaatgtactgcttaatgcagcatcaaacaagacgacaata
gttccaactaatcttaccgtaaagaaaatatcaacacccaaaattaattttgtcggtggc
aataaactacagacgacaggaagcaaagtggatgaattaaaagcagtggaaaatgtcaaa
acagctccttcggttgctacgttgcagacacaagaaatcaaaccagatacatcctctgaa
cctgtaacacctacatctcttgctgctttgcaaagtgatgtccaaccagtgggccatgat
tatgtggaagaggtacggaatgatgaagggaaggtgattcgtttccattgcaagctttgt
gagtgcagttttaatgatcctaatgccaaagagatgcatttgaaaggaagacgacacaga
ctacagtacaagaaaaaagtaaacccggacctgcaagtagaagtaaagcccagcatccgg
gcaaggaagatacaggaggaaaagatgaggaaacagatgcagaaagaagaatattggaga
aggcgggaagaagaggagcgctggaggatggagatcagacgttatgaagaagacatgtac
tggaggaggatggaagaagaacagcaccactgggatgaccggcgcaggatacctgagggg
ggatatccccatggccccccaggccccctcgggctacttggtgtgagaccagggatggca
ccacagccccagggaccagcacccctccgccgaccagattcatcagatgaccgctacgtg
atgaccaaacatgccgctatctatccaaccgaggaggaactccaggcggtccaaaaaata
gtgtccatcactgagcgtgcgttgaaactggtgtccgataacatgactgacaacgacaaa
accaaaaccaaggacgcagacgataaaaaagaaggcactaaagacagagctttgaaagga
gtcttacgagtgggagtgttggccaagggcttgcttctccgaggagaccgaaatgtcaat
cttgtcttgctgtgtgccgagaagccatcaaagacattgctgacccgtattgctgaaaat
cttcccaagcaacttgctgtaataagccctgagaaatatgaaataaagtgtgcgatacaa
gaagcagcgatcattttgaattcatgcgtggaaccgaaaatgcaagtgaccatcacgctg
acatcgcctgtgattcgagaagaaaacatgagggatggagatgtaacctcgggtatggtg
aaagatccaccggacgtcttggacaggcaaaaatgccttgacgctctggctgctctacgc
cacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtcattatcatacgc
attcttcgtgatctctgtcagcgagttcccacttggtctgactttccgagctgggcaatg
gaattattagtagagaaggcaattagcagcgcaactggaccacaaagtcctggggatgcg
ctaagaagagtgtttgaatgtatatcttcaggaattatccttaaaggaggtcctggcctt
ctggacccatgtgagaaagatccttttgacacccttgctttaatgacagatcagcagcgt
gaagatattacttcaagtgcacagtttgcactacgactactggcattccgtcaaatacac
aaagtgctaggaatggatcctttgcctcagatgaaccagcgtttcaatatccacaacaac
cgcaagaggagacgggacagcgacggagtagatggatttgaagcagagggcaaaaaagac
aagaaagactatgataacttttag
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