Sphaerodactylus townsendi (Townsend's least gecko): 125436699
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Entry
125436699 CDS
T08213
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03013
Nucleocytoplasmic transport
stow03015
mRNA surveillance pathway
stow03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125436699 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
125436699 (NCBP1)
03015 mRNA surveillance pathway
125436699 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stow03019
]
125436699 (NCBP1)
03041 Spliceosome [BR:
stow03041
]
125436699 (NCBP1)
Messenger RNA biogenesis [BR:
stow03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
125436699 (NCBP1)
Spliceosome [BR:
stow03041
]
Common components
Common spliceosomal components
Cap binding complex
125436699 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
CCDC39
KASH_CCD
DUF1003
Motif
Other DBs
NCBI-GeneID:
125436699
NCBI-ProteinID:
XP_048359873
UniProt:
A0ACB8ESP2
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All DBs
Position
LG07:complement(99546506..99576902)
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AA seq
789 aa
AA seq
DB search
MSRRRHSDENDGRQPYKKRRTSEIEDRLESLICRVGEKSSSSLESNLEGLAGVLEADLPN
YKSKILRLLCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMYNE
AVYLIRFLSDLVNCHVIAAPSMVAMFENFVGVTQEEDVPQVRCDWYVYAFLSSLPWVGKE
LYEKKDAEMDRILSNVENYLKRRQKIHVPMLQVWSADKPHPQEEYLDCLWSQVQKLKKDR
WQERHILRPYLAFDNVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVM
PGSHSAERFVIEENLHCIIKSHWKERNTCAAQLLSYPGNNKIPLNYHIVEVVFSELFQLP
IPPHTEVMYTALLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTVCIDRFNNWFSHHLSN
FQFRWSWEDWAECLTYELDKPRPKFVREVLEKCMRLSYHQQIVDVVPASFSVLTPANPVC
IYKYGDESNKDLPGYNVALCLNIAIKNKASNSEILTILKDVPNPNQDDDDDEGFSFNPLK
IEIFVQTLLHLAAKSFSHSFSALGKFREVFKTLAESDEGKLHTLRVMYELWKNHPQMIAV
LVDKMIRTQIVDCAAVANWIFSPELAHDFTRFYIWEILHSTIRKMNKHVVMIQKELEEAK
ARLAKHHKRRDSDDDDHHSSDREDGPLGEQIERLQEKVESAQSEQKNLFLVIFQRFIMIL
TEHLVRCETGGIDAITPWYKNCIERLQQIFLQHHQTIQQYMVTLENLLFTAELDHHILAV
FQQFCALQA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggcggcacagcgacgaaaacgacggaaggcagccgtacaagaagaggaga
acgtctgaaattgaagatcgactagaatccttgatatgccgagtaggagaaaagagttct
tcttctttggagagtaatttagaaggcctggcgggtgtcttggaggcagatctgccaaac
tacaagagcaagatactaagactcctttgtacagttgcacgtttgttgccagaaaagctg
actgtttacacaactctggttggcttgctgaatgccaggaactacaattttggtggagag
tttgtggaagccatgattcgtcagctcaaagagtgcctgaaagtcaacatgtataatgaa
gccgtgtatttaattcgttttctctctgatctagtgaattgccatgtaatagctgcaccg
tcaatggtagccatgtttgaaaactttgttggtgtaactcaggaggaagatgtacctcag
gtgcgttgtgactggtacgtgtatgcgtttctgtcatccttaccttgggtgggaaaggaa
ttgtacgagaagaaggatgccgagatggatcgcatcttgtccaacgttgaaaattacttg
aaacgccgtcagaaaattcacgtacccatgttacaagtgtggtctgctgacaaaccacat
cctcaagaagagtacctggactgcctctggtctcaggtgcagaagctgaagaaagaccgc
tggcaagaacggcacatcctgcggccctacctggcctttgacaacgtgctgtgtgaggca
ctgcagcacaacctgcctcccttcactccgccaccacatacagaagattcagtctacccg
atgccaagggtgatctttcgaatgtttgactacactgacgaccccgagggtcctgtcatg
cctggcagtcattctgctgagaggtttgtgatagaagaaaatctccactgcatcatcaaa
tcacactggaaagagagaaacacttgtgctgcccagttactgagctatcctggaaataac
aagatccctctgaactaccacatcgttgaggttgttttttcggagctgtttcagcttcct
attccgccacacacagaggtcatgtacacagcgcttctcattgaactctgtaaacttcag
cctggctctttgccccaagttctggcacaagccacagaaatgctgtacatgcgcttggat
actatgaacacagtgtgcatagataggttcaacaattggttttcccaccatttgagtaac
tttcagttccgttggagctgggaggactgggcagaatgtcttacttacgaactagacaag
cccagacctaaatttgtaagagaagtgttggagaaatgcatgaggctgtcctaccatcag
caaatagtagatgttgttcctgcctctttttcagttctaactcctgcaaatccagtgtgt
atttataaatacggagatgaaagcaacaaggatcttcctgggtacaacgttgccctctgt
ttaaacatcgccataaaaaacaaagccagcaacagtgaaatcctcaccatcctgaaggac
gtgcccaatcccaaccaagacgacgatgatgatgaaggcttctccttcaatcctctgaag
atagaaatatttgtacagacccttcttcatttggctgccaaatcattcagtcactccttt
agtgccctgggaaaatttcgcgaagtcttcaaaacattggcagaaagcgatgaagggaaa
cttcacacccttagagttatgtacgaactttggaagaaccatccacagatgatcgctgta
ctagtggataagatgattcgcacacagattgtggattgtgctgcagtagcaaactggatt
ttctctccagaactggctcatgacttcactcggttttatatatgggaaatcttgcactcc
acaatccggaaaatgaacaagcatgtggtgatgatccagaaggagttagaagaggccaaa
gcaagactggccaagcatcacaaacgtcgagacagtgatgacgatgaccatcatagcagc
gaccgggaagatgggcccctgggagaacagatagaacgcttgcaagaaaaagttgagtct
gctcagagcgagcaaaagaacctcttccttgtgatattccagcgtttcattatgatccta
acagagcaccttgtgcggtgtgaaacaggtggaattgatgccatcacaccttggtacaag
aactgtatagagaggctgcagcagatctttttacagcaccatcagaccatccagcagtac
atggtgactttggagaaccttcttttcacggcagagttggatcatcacatacttgccgtt
tttcaacagttctgtgcgctgcaggcctga
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