Sphaerodactylus townsendi (Townsend's least gecko): 125436976
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Entry
125436976 CDS
T08213
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125436976 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125436976 (MSH3)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125436976 (MSH3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_7
Phage_fiber
Motif
Other DBs
NCBI-GeneID:
125436976
NCBI-ProteinID:
XP_048360312
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Position
LG07:38936301..39003885
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AA seq
1156 aa
AA seq
DB search
MPRGRRKQHPGDVARGQTVLSKFFLPSPSAVSTSAPPAEALVSSEERSRGDSAAPASLCP
ELEPVGKRRRTVKNKDQHSKNLQCRQKQEGAGEQKKCANPRICSETFLKLREFSSHLEQP
SHRIHSEVSHGSQFVNLEKGQQSDIGNTGILYSQNVDKEEACLQFNQFSLSDTNCENIQN
TSDSILNKRTKCIYTPLELQYLEVKNQHKDVILCVECGYKYRFFGEDAEVAAKELNIYCH
QNHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQMETAALKAVGDNKSSLFTRKLTALYT
KSTVLGEDVNPLLNLDHCSDAEAVSYDACDNYLLCICESKESLREKRQNTTIGLVAVQPS
TGEVIFDSFQDSVARLELERRILCLQPVELLLPADVSNQTANLINTVSSVSLHDDRIRIE
KMENKHFEYSSAFQLITDFYGCQEHDNTGSQTLSFILNLDKSILCCLAAVITYLKEFNLE
KILYNLNNFKKLSSEAEFMTLNATTLKNLEILHNQTDRKTKGSLFWVLDHTKTLFGRRKL
KKWVTQPLLKSSEIDSRLDAVSEVLMSESSVLGQIKTLLYKIPDVERGLCTIYHKKGCSG
FGQYALIIIIKQTFELFWLNYPVTSTFPGLKAHGLGSIITFTFNCLFQGDSYLVVLLLTQ
LGAAVTALIPAIRSQVKASLLQKRLLEIPELLCSMKNYLNILNEEAAKTGNKTQLFNDLK
NFPTIKKRKDEIEAVLHQIQLHLQDIRKKLNGLSVDYRTVSGQEFLIEVKNSMISSIPSD
WIKVSSTKTVSRFHTPFIVENYKHLNQLREQLVLDCSAEWLHFLDNFGEHYHSASKAVGH
LATIDCVFSLAEVAKQGGYCRPVIKDDRSEIMIKNGKHPVIDLLLGEQEQYVPNDTLLSE
DSQRAMIITGPNMGGKSSYIKQVALITIMAHIGSYVPAEEASIGIVDGVFTRMGATDNIF
KGHSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATLEYFIKDVGSLTL
FVTHYPPVCELERVYPSQTGNYHMAFLINEEDREAERATDHEEIPGFVTFLYQITREVAA
SSYGLNVARLADVPDEILKKAAHKSKELERLMNMKRKRLMSFARLWNANDARDLQKWKSM
CETEVDGTNGKNDNTC
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagggcgaaggaagcagcacccgggcgatgtggcccgcgggcaaacagtgctg
agtaaattcttcctgccgtctccttcagctgtctctacctccgctcctcctgctgaagcg
cttgtttcctccgaggagagatcacgcggtgattcggcggctccagcttctctgtgcccg
gaacttgaaccagttgggaaaaggagaagaactgtaaaaaacaaagaccagcattcaaag
aatttgcagtgtagacaaaagcaagagggagctggggagcaaaaaaaatgtgccaaccct
cggatatgttcagaaacatttcttaaattgcgagaattttccagccacctggaacagccg
agtcatagaattcattcagaggtttctcatggaagccagtttgtgaatttggaaaaagga
caacagtcagacattggaaacactggcattttgtactctcagaacgttgataaggaggaa
gcatgccttcaatttaatcaattttctttatcagatacaaattgtgaaaatattcaaaat
acttcggattcaattctcaacaaaagaaccaaatgtatatatacaccacttgagctccag
tacctagaagtgaaaaatcaacataaagatgttattttatgtgttgagtgtggttataag
tacagattctttggtgaagatgcagaggttgctgctaaggaactgaacatctattgtcat
cagaatcacaactttatgactgccagcataccgactcataggctgttcgttcatgttcga
cgacttgtagcaaaaggatataaggtaggagttgtaaaacaaatggaaacagctgccttg
aaggctgttggagacaacaaaagctctctcttcacccgaaaactaactgctttgtataca
aagtctacagttctaggagaagatgtgaatcctttactgaaccttgatcattgttctgat
gctgaggcagtatcatatgatgcctgtgataattatcttctctgtatctgtgaaagcaaa
gaaagtttgagggagaaaaggcagaacactacgataggtctagtggctgtccagcctagt
acaggggaagttatttttgacagctttcaagactctgtagctcgtttagagttggaacgt
cggattttatgcctgcagcccgttgaacttcttcttcctgcagatgtgtcaaatcagact
gcaaatcttatcaacaccgtgagttctgtaagtttacatgatgacagaattcgaattgaa
aaaatggaaaacaagcattttgaatacagcagtgctttccagctgattacagacttttat
ggctgtcaagaacatgataacacaggctctcaaacattgtctttcatcttgaacttggac
aagtcaatattatgctgcttggctgccgtgataacttaccttaaagaatttaatttagaa
aaaatactgtataaccttaataattttaagaagttatcaagtgaagctgaattcatgaca
cttaatgcaactacgctaaaaaatctagaaatcctacacaatcaaactgacaggaaaaca
aaaggcagcctgttttgggtcttggatcatacaaaaactttatttggacgacggaaactg
aagaaatgggtaacacagcctctcttgaaatccagtgaaattgattctcgacttgatgct
gtgtctgaagttcttatgtctgaatcaagcgttcttggtcaaattaagaccctcctatat
aaaataccagatgttgagagaggactctgtactatttatcataaaaagggttgtagtggc
tttggacagtatgctttgataatcattattaaacagacatttgaactgttctggctcaac
taccctgttacatctacatttcctggcttaaaagctcatggcctaggcagtataattact
ttcacttttaattgtctgttccaaggggattcctatctggttgtccttttactgactcag
ttgggagctgctgtcacagcactgattccagctatacgttctcaggtgaaagcatctttg
ttgcagaagagactcttggaaataccagagttactctgttcaatgaaaaattacttaaat
atacttaatgaagaagcagccaaaactggaaataaaacccagctcttcaatgatcttaaa
aacttccccacaataaagaagcggaaggatgaaattgaagcagtacttcaccagatccag
ttacaccttcaagatataagaaaaaagctaaatggtctttctgtggattatagaacagta
tctgggcaagagtttctgattgaagtcaagaactctatgatatcttccataccatctgac
tggattaaagttagcagcacaaaaactgtcagccgtttccacactccatttattgtagaa
aattataaacatctgaatcagctacgtgagcagctagtacttgactgcagtgctgaatgg
ttacactttttagacaattttggtgaacattatcactctgcttctaaagccgtgggtcac
ctagcaactattgattgtgtcttttccttggctgaggttgctaaacaagggggctattgc
aggccagtcataaaagatgacagatcagagataatgataaaaaatgggaaacacccagtg
attgacttgttgttaggggagcaagagcagtatgttccaaatgataccctcttatcggaa
gacagtcaaagggcaatgataattactgggcctaatatgggtggaaagagctcctatata
aaacaagttgcattgatcaccatcatggcacatattggttcgtatgtaccagctgaggaa
gcatctattggtattgtggatggcgtattcaccagaatgggtgccacggacaatatattc
aaaggtcacagtacatttatggaagaactgacagatacagctgaaataattagaaaagca
acctcacgttcacttgtaattttggatgaacttgggagaggaaccagcacacatgatgga
attgctattgcatatgctacgctagaatattttattaaagatgtgggttcactgacattg
tttgtcacccattatcccccagtgtgtgagttagaaagggtctatccaagtcagactggg
aattaccatatggcttttctgataaatgaagaggatcgtgaagcagaaagggcaactgat
catgaagaaatccctggatttgtcactttcctttatcaaataacaagagaggttgctgca
agcagttatgggctaaatgttgccagactagcagatgttcctgatgaaattcttaagaag
gcagctcacaaatcgaaagaactggagagattaatgaatatgaaaaggaaaaggctgatg
tcatttgctagattatggaatgctaatgatgctagagatctgcaaaaatggaaaagtatg
tgtgaaacagaagttgatggaaccaatggcaaaaatgataatacttgttga
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