Sphaerodactylus townsendi (Townsend's least gecko): 125437016
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Entry
125437016 CDS
T08213
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125437016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stow03009
]
125437016
Ribosome biogenesis [BR:
stow03009
]
Eukaryotic type
Pre-60S particles
RNases
125437016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
DUF1977
Motif
Other DBs
NCBI-GeneID:
125437016
NCBI-ProteinID:
XP_048360344
LinkDB
All DBs
Position
LG07:complement(90977091..91000733)
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AA seq
1062 aa
AA seq
DB search
MLRPAGFFRRFYCPFDTRGCRRPYCQYSHISRGWRGPPTAQQQPLSGSPSPRLGDKMQEL
KRINETIQSFKTEVEEGEKKLLYDNLVQADCKQSLAPAINDPTGNISSFDQGQIRSASTK
DKVHAISTSKDSCQSNKYIIDCSCLVTDLEYDPLLNYSAGLLRSSMEEEDRNDRQKVKMF
PGGNLQESAKLPCEKRYGFPSKRSRGSSPVKLEKKLQQSDGNTLVIDTMPVRMSKKPRIS
KSCKKWKKEECELSFKSTAEAQKSSEKSKSSYIERRRAEGSTVALYINKNDKKETEIKSV
TNENSYIPNVKVTTLNEECNPNDQRKHHIWRERNILSHSQMKDEIARETFKQDSVNISVN
NETNNMKEQMSNWKTLLNKTHAKTCCEDSSKDRFVLLQDISKKSPDHLGSMQLYKKNEVQ
NNVQSSPVDLDEKKSFYEDALSESCDKKHDDESVYINVKNEEVIVIDSSEEDNSEEGAEH
SDDTVEQCRKFFNEFVEREAQKDKLTKQAFAVQIEANSVSKTNMLLGQKRRIAHTAKFDV
NATKEIIVPFKAPLPQQTYHSRILQAQQQAVEIMAAVKSGQAFVAATCSSKKSATVTPTT
RIQNMEPMVRLNVFKDQPVGTSSSHMNVLHPGSTLAAVPCRLSNNSVRRIASVPFKVSSR
KRSSVVPELGSKVPHDIRQRYINFFVEEFFKVSATVNEAFKKALAEEKAIYDRCGGKNMY
LNIAVKTLKKLRDHGRVSSDGKTCQNLSTATGLRKQEEKNDFTGIALYRLLKDYALTEEQ
MKENGYPEPNPKKPGSAMLCPGSTKPPVYDSSRRVCCRCGEMYRVSSSGNHVRKEECNYH
SGRILRHKGGWESRYSCCEGVVGSLGCQVAKLHVHDRRKENIDGFVKTFIKPPPLDGNHG
VFAVDCEMCYTTRGLELSRVSVVDPSLQVVYDKVVKPDNEIIDYNSRFSGVTAEDMKNTA
ISVKDVQAVLLNLFSADTILIGHGLGNGLFALKLFHSNIVDTSVVFPHRLGFPHKRAFRT
LIADYLRRIIQDDVGGHDSSEDAAACMELMLWKVREDNKGRR
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccccgccggtttcttcaggcgcttctactgtccctttgacacccgcgggtgc
cggcgaccttactgccagtacagtcacatatccaggggctggagggggccgcccaccgcc
cagcagcagcccttgagtggctccccttcgccgaggctgggtgacaagatgcaagagcta
aaaaggatcaatgaaaccattcagtcatttaagactgaagttgaagaaggagaaaagaag
ctcttgtatgataacttggtgcaagctgactgtaaacagtctttggcacctgcaataaat
gaccctacaggaaatatttcttcgtttgatcaaggtcaaattaggagtgcttctacaaaa
gataaagttcatgccatttcaacctcaaaggactcttgccaatccaataaatatattatt
gactgtagttgtctggtcactgatcttgagtatgacccattgcttaattattctgctggt
ctgcttaggtcttccatggaagaagaggatagaaatgacaggcaaaaagtaaaaatgttc
cctgggggaaatttgcaagaatcagcaaagttgccatgtgaaaagagatatggatttcca
agtaagagatcaagaggttcttctccagtaaaacttgaaaaaaaactgcagcaatcagat
ggtaatacgcttgtaatagatactatgccagtaagaatgtcaaagaaaccaagaataagt
aagtcctgcaaaaaatggaagaaggaagaatgtgaattgagttttaaaagtactgcagaa
gctcagaaaagctcagagaaatcaaagtcttcatatatagagcgaaggagagcagaaggt
agcacagttgctctctatattaacaaaaatgataaaaaagaaactgaaataaaatctgta
acaaacgaaaactcttacattccaaatgtaaaagtgaccactttgaatgaagaatgtaat
cccaatgatcaaagaaaacatcatatttggagggaacgtaatatattgtcacactctcag
atgaaggatgaaattgccagagaaacttttaagcaggattctgtgaacatctctgtgaac
aatgaaacaaataatatgaaggagcagatgagcaactggaaaactttgctgaacaaaacc
cacgctaaaacatgttgtgaagacagctcaaaggatagatttgtactgttgcaagacatt
tccaaaaaatcacctgatcacttagggagcatgcagctgtataaaaaaaatgaagtgcaa
aataacgtgcagagcagtcctgtggatttggatgaaaaaaaatctttttatgaagatgcc
ttatctgaaagctgtgataaaaagcatgatgatgaaagcgtctatataaatgtcaaaaat
gaggaggtaattgtaattgactcttcagaagaagacaattctgaggaaggtgcagaacat
tctgatgatactgtggaacaatgtcgaaaattttttaatgagtttgttgaacgtgaagca
caaaaagacaaactaacaaagcaggcatttgcagtgcaaatagaagcaaactctgtttca
aagacaaatatgcttcttggacagaagagaagaattgcacacactgcaaaatttgatgtt
aatgccaccaaagaaataattgtaccttttaaggcacctcttccacaacagacttaccat
tccagaatcctgcaagcgcaacagcaggcagtggaaataatggctgctgttaaaagtggt
caagcttttgttgctgcgacttgcagctcgaagaaaagtgcaacagtaacaccaactact
cggattcaaaacatggaacccatggttcgtttaaatgtgttcaaagatcagccagttgga
acaagcagcagtcacatgaatgtactacatcctggaagtacattggcagcagtgccatgt
aggctttccaataattcagtcagaagaattgcttcagtgccatttaaggtgtcaagtcgg
aaaaggtcttctgttgttccagaacttggatctaaagtaccacatgacataaggcaacga
tatatcaatttttttgtggaagaattctttaaagtttctgcaactgtaaatgaagctttc
aaaaaggcattggcagaagaaaaggcaatatatgaccgctgtggtggtaaaaatatgtat
ttgaacatagctgtgaaaacacttaaaaaactgagggatcatggcagagtgtcatcagat
ggtaagacttgtcagaatttgagtactgccactggccttagaaaacaagaagaaaaaaat
gattttacaggaattgctctctacagacttctaaaagactatgctctaactgaagaacaa
atgaaggaaaatggctatcccgaaccaaatcctaagaaacctggtagtgctatgttatgc
cctggcagtactaaaccacctgtatatgactcttctagaagagtgtgttgtagatgtgga
gaaatgtatcgtgtgagttcatcagggaaccatgtccggaaagaagaatgtaactaccat
tctggtagaatattgaggcataaaggtggttgggaatcacggtatagctgttgtgaggga
gtagttgggtctcttgggtgccaagttgcaaagctacatgttcatgatagaagaaaggaa
aatatagatggatttgtgaagactttcatcaagccacctccacttgatggaaatcatggt
gtatttgcagtagactgtgaaatgtgttacacaacacgtggtctggaactctccagagtg
tcggtagttgatccttctcttcaggttgtctatgataaagttgtgaaacccgataatgaa
atcatagattataacagtagattttctggagtaacagcagaggacatgaagaatactgca
atatcagttaaagatgttcaggcagtattgctaaacttgttcagtgcagacacaatttta
attggtcatggtttagggaatggtttatttgctcttaagctgtttcacagtaatatcgtg
gatacatctgtggtttttcctcatcgtctaggtttccctcataaacgagcatttagaact
ctaatagctgattatctcagaagaatcattcaggatgatgtgggtggacatgattctagt
gaagatgcagctgcttgtatggagttgatgctttggaaagtgagagaagacaataaaggt
agaagatga
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