Sphaerodactylus townsendi (Townsend's least gecko): 125437059
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Entry
125437059 CDS
T08213
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125437059
03036 Chromosome and associated proteins [BR:
stow03036
]
125437059
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stow03037
]
125437059
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125437059
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125437059
UBL E3 ligases
125437059
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125437059
Cilium and associated proteins [BR:
stow03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125437059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
Baculo_IE-1
zf-RING_11
RING_XB3-XBAT31
Prok-RING_4
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125437059
NCBI-ProteinID:
XP_048360385
LinkDB
All DBs
Position
LG07:108743930..108749411
Genome browser
AA seq
789 aa
AA seq
DB search
MASTTLMTKAVKTPGVGGRCCLTPTESNMKGIGLCRESMIVSVEQMIQKSITFALEEASP
LHLQIMKSLHKESKSRIGCRSTSRGSLVKTIVLDAARNSKCGICLEKIQDATYLNPCNHR
FCFACIQNWSKKKVLCPLCKQRFYSFFHIVNTKGTFCEYVLPLSDDSFPHSETRIGHASS
SSQRSASPPDSGIVHDEISGTLSQTEKDVYQLMRQFAVTKRPGNIDIITLGKFKAHAVVQ
FRRALYHAGLLVQKTHYPDLYRNASAEYFSRHPDSFDRLIPWLKRELKVLCGNQKSLIQT
LQSFILNNMTQHDLRSKEFEDLLRPHLHHFTSHFLHELISFVQSPFTIKKYDWHSTYECP
PLPKEGSDSFISSSTSDDEHSQLPDDDQAPETDGNLDGGNLGSPQSCSENDPSAVVDGTQ
YPNKEGNNLEDLTSTGMEKDGHSSDNFIQNQGVSLPPNPSVQPSLLHNQTLPCKNENEKI
GEPDPVQTCSSKNVEPFEDSSNLLASGDYNISNCNNGEIVAIPNEQHVSKGETIQFQQPD
VYTNYSRCSSSERCTTVSPGRKNVFKKRGSRGIECYAEERHGRQSRARNYQERKQTTNYT
RIGERRPRTEAEKPRCQDVSLFHQNKMLLPFKNENIVTRNISKSRYQQSNHFTKLRNKDY
DNLRNSPASEPSWRYLYYKQDYERYRYEEFMRQKAGEPRFYHPHMLTGSKGRSYFSPENR
TSAHQESLAKGWNYSETHRSAGRPKSRFVALGPERGSFEKLGRRRKHKSHHLESGYAKGG
ARYFQDYIV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccactttgatgacaaaggcagtgaaaactcctggggtgggaggaagatgt
tgcttgactcccacagagagcaacatgaaaggcatcggtctgtgcagagaaagcatgatc
gtttcagtggagcagatgattcagaagagcatcacctttgcactcgaggaagcatcacct
ttgcatttgcagataatgaaatctttgcacaaggaaagtaaatcgaggattggctgtaga
tctaccagtagaggttctttagtaaaaacaattgtgctagatgcggctaggaactcaaaa
tgtggcatttgtttagaaaaaattcaagatgctacttacctgaatccttgtaaccaccga
ttctgctttgcttgcatccagaactggtctaaaaagaaagtcctatgtccactctgtaag
cagcgattctattcattctttcacattgtgaacacgaaaggtacgttttgtgaatacgtt
cttcctttgagtgatgactcctttccacattctgaaaccaggataggtcatgcatcaagt
tcctctcaaaggtctgcatcaccacctgacagcgggatagtgcacgatgaaattagcgga
actctcagtcaaacagagaaggatgtttatcagctgatgcgacagtttgcagtaacaaag
agacctggtaatatagacataataacccttgggaaatttaaagcccatgctgtcgttcag
tttaggagagctctataccatgctggcctccttgttcaaaaaactcactatccagatttg
taccgaaatgcttcagcggagtatttcagcagacacccagatagcttcgacaggttaatc
ccttggctgaagcgagaattaaaagtgttgtgtgggaatcaaaagtcattgattcaaact
ttgcagagcttcattctaaataacatgactcagcatgatctacggagcaaggagtttgaa
gatctcttacggcctcacttgcaccatttcaccagccacttcttgcatgaactcatcagt
tttgtacaatcgccattcactatcaagaaatatgactggcattccacatatgaatgccca
cctcttccaaaagaaggttctgattctttcatttcttcttcaacttctgatgatgagcat
tcccagcttccggatgatgatcaggcacccgaaactgatggtaatttagatggtggaaac
ctgggaagcccccagtcatgttcagaaaatgatccatcagctgtggtagatggcacacaa
tatcctaacaaagaaggaaataatttggaagacttgaccagtactggtatggaaaaagat
gggcattcatcagataactttattcaaaatcagggggttagtttaccaccaaacccatcc
gtgcagccatcattattacataatcagacacttccatgcaaaaatgaaaatgaaaagata
ggagaaccggatcctgttcagacatgcagctcaaagaacgtcgaaccttttgaggattcc
tcaaatttattagcatcaggtgactataatatatctaattgtaataatggagagattgtg
gcaatccccaatgagcaacatgtatcaaaaggagaaacaatccagttccaacaaccagat
gtttataccaactactcaagatgttcctcttcagaaaggtgtacaacagtatctcctggc
aggaagaatgtattcaaaaagcggggatcaaggggtatcgaatgttatgcggaggaaagg
catggaaggcaaagtagagcaagaaactaccaagaaagaaagcaaactacaaattacacc
agaattggagaaaggaggccgagaacagaggcagagaaaccaagatgtcaagatgtcagc
ttatttcaccagaacaaaatgcttttgccgttcaaaaatgagaacattgtcactaggaat
ataagcaagtcaagatatcagcaaagtaatcattttacaaaattaaggaacaaagactat
gataatttaaggaacagtcctgccagtgaacctagctggagatacctttactacaaacaa
gattatgaaaggtataggtatgaggaattcatgcgtcaaaaggctggtgaacccagattt
tatcatccacacatgctgactggctccaaggggaggtcatatttctccccagaaaataga
acatcagcccatcaggaaagcctggccaaaggatggaattattcagagacacacagaagt
gcaggcaggccaaagagcagatttgttgcattaggaccagaaagagggtcttttgaaaag
ctaggtaggagaaggaagcacaaatcacaccacctggaatctggctatgcaaagggaggg
gcaaggtatttccaggattatattgtgtag
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