Sphaerodactylus townsendi (Townsend's least gecko): 125437061
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Entry
125437061 CDS
T08213
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stow03036
]
125437061 (SHOC1)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125437061 (SHOC1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
125437061
NCBI-ProteinID:
XP_048360387
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Position
LG07:111956081..111984845
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AA seq
909 aa
AA seq
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MAKFRLQCCISDAKEESPAFENQDSPVTLKTTIHEPETKENGIAFIQIKPSESQFQAYHI
LEAIVAPVLKELTSLCMHNWKFATLDFDDTRFFLKQQEKVISDAFKQGATADEKDITLFK
HAAVLHLVVTVRDLLLTCSLKVALGYLSKAKDRYKEFVGSSLDNLCRLLTIVQLAGQKKL
EGNPKATELQHQMSKWMQSKTSEQNKVVIVTRMDYGDETAALINIVSAVQGLKVAYLNSE
KKGASLESKNVISRLERYSCVVVYDQHIGSDFPWTNFSLVVEYNYSKNSCWMDLCKNLNI
SYVTFITALPEEAAGIEVSPDDYGHFLLEVQIPYVFLTSEGLLNTPEILQLLESKYNITF
IERSCYEALHFFGSTDRYVVITIDECTAVIMQNIEELNYEKSSDNIVLRLMVLTLQYTCC
WIILYSRARLNSEYSLAGQTLHHLALIYAALVPFSQKSEDFEVKVVLTPGVEETALLVRQ
IADYVLMTSKRHPQEWLDKSWLSVLPSEAEKRLLMFPCVNPVVAQVMLKKGLSLEWLLSA
TFDQLQELLPEVPEKVLKHFSDITSLYTLNSPTEPKLQNRIAECKEKTNSPISPCSPAPE
ALFSNVQGHSPFTEHSGCFTEAQNSRSCSPGYYKKESRIPQKPNGRHCIMAPSLSYQEEI
CSFKERGAKKQQYFPFQKNMEIKSGVNSSLHSFGEPPHNPFEAAVPSLGYNQGGTNTYLE
KYPLEEISFSEIKRGRNLEVPVLLKNPSHQDVQHVLRRREQSLAKHHKASLLSKPSWCLT
TNREDIPFQQSSGCFLEEFNGATYNSPELQFEGSFLDDYQSVPTADPSLDGLSFCQATVN
SERLFNLDFQRAEEYTGRRRLSFLSPLNRRQQAVSAGLECIQLPQLKKRRLTFEKDPGRS
DGQTRLKFF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattccgtttgcagtgttgcatttcggatgcgaaggaggagagcccagcattt
gaaaaccaagacagtcctgttactcttaaaactacaattcatgaacctgagactaaagaa
aatggaatagccttcattcaaattaagccatcagaaagccagtttcaggcatatcatatc
ctcgaagcaatagttgctcccgttttaaaagagctcacgagtctttgtatgcataattgg
aagtttgccactcttgattttgatgacaccagatttttcttaaaacagcaagagaaagtg
atcagtgatgcttttaaacaaggggcaacggctgatgagaaggatattaccttattcaaa
catgccgctgttctgcatttggtggtaacagttcgtgacctcttattaacctgtagcttg
aaggtagcattaggctatttgtccaaggcaaaagacaggtataaggaatttgtaggctct
agcctggataatctttgccgactgctgacgattgtgcagttggctgggcagaagaagctt
gaaggcaatcccaaggcaacagagctgcaacaccaaatgtccaagtggatgcagagtaag
acaagtgagcaaaataaggtagtcatcgtgacgaggatggactatggtgatgaaacagcg
gccctgataaacatcgttagtgcagtgcaaggcctaaaagtcgcatatttgaattccgag
aaaaaaggagcttcgctagagagcaaaaatgtaataagcagattggaaagatattcctgt
gtggttgtatatgatcagcatattggatctgattttccctggactaatttttcattagta
gtggaatataactactcaaaaaattcctgctggatggatctttgcaaaaatctgaacata
tcatatgtaactttcataacagctctcccagaagaagcagctggaattgaggtttctcca
gatgattacggacatttccttcttgaggtgcaaattccatatgtctttctgacctctgag
ggattactcaacactccggaaatccttcagttactggagtccaagtataatattacattt
attgagagaagctgctatgaagcgttacacttctttgggagcacagaccgttatgttgtg
ataacaatcgatgaatgcacagccgttattatgcagaacatagaagaactcaattatgaa
aagtcctctgacaacattgtgttaagactgatggtgctaacacttcaatacacttgttgc
tggatcattttgtactctagagcaaggttaaattctgagtacagcctagctggacaaact
ttgcatcacttagccttgatttacgcagcactggttccgttttctcagaagtcagaagac
tttgaagtgaaggtggttcttacaccaggtgttgaagagacagctctcctggttcgtcag
attgctgactatgttttgatgacttctaaaagacatcctcaggagtggctggacaaatcc
tggctttctgtcttgccatcagaggcggagaaacgcctgcttatgtttccatgtgtgaac
cccgtagtggctcaagtcatgttaaagaagggtttgtcattggaatggctcctgtcagca
acatttgaccagcttcaggaacttctgcctgaagtaccggaaaaagttttaaagcacttt
agtgacatcacatctttgtacaccttaaactctccaactgagccaaaacttcaaaataga
attgcggaatgtaaagaaaagacgaactctcccatcagcccctgctctccagctcccgaa
gctttgttctccaatgttcaaggacatagtccatttaccgagcattcaggatgctttact
gaagcgcagaacagcagaagctgttccccaggttactacaaaaaagagtctcgcatccct
cagaaaccaaatggaaggcactgcattatggcaccttccttatcctatcaagaagaaata
tgctctttcaaagagagaggggcaaagaagcaacagtattttccatttcagaaaaacatg
gaaataaaatcaggagtgaattcatcactacacagttttggtgagcctccccataaccct
tttgaagctgcagtgccatctttggggtacaaccaagggggcaccaacacttaccttgaa
aagtacccacttgaggaaataagcttttcagaaataaaaaggggaagaaatctggaagtt
ccagtcttgttaaagaacccttcccatcaagatgttcaacatgtacttcggaggagggaa
cagtctcttgcaaagcaccacaaggcaagcctgctttccaaaccgtcttggtgtcttact
actaatagagaagacatcccattccagcagagctctggctgttttctggaagaatttaat
ggggcaacatataacagtccagaacttcagtttgagggaagtttcctggatgactatcag
tcagtgccaacagcagatccatctttggacggtctaagtttctgtcaagcaacagttaat
tcagagaggcttttcaacctggactttcaaagagctgaagaatatacaggaaggagaaga
ctcagtttcctgtcacctttgaatagaagacagcaagctgtttctgcaggtttagaatgc
atccagttaccacagcttaaaaaaagacgtctaacatttgaaaaagatcctgggagaagt
gatggtcaaacacgtcttaagttcttttaa
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