Sphaerodactylus townsendi (Townsend's least gecko): 125437129
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Entry
125437129 CDS
T08213
Symbol
POLR2B
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03020
RNA polymerase
stow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125437129 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
125437129 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stow03021
]
125437129 (POLR2B)
03400 DNA repair and recombination proteins [BR:
stow03400
]
125437129 (POLR2B)
Enzymes [BR:
stow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125437129 (POLR2B)
Transcription machinery [BR:
stow03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125437129 (POLR2B)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125437129 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
125437129
NCBI-ProteinID:
XP_048360469
LinkDB
All DBs
Position
LG07:complement(97642934..97671697)
Genome browser
AA seq
1184 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPLASSQLMSEGDDVIIGSIRRPVPLCAERIEGRSWRAPVPXYTKR
DCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYR
QEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQK
ISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQIL
NRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANT
RTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatatgatgaggatgatgatgaaattactccagac
ttatggcaagaagcatgttggattgttattagctcctattttgatgaaaaaggcctggtt
cgacagcagctggattcctttgatgagttcattcagatgtctgtgcagagaattgttgaa
gacgctccaccgattgacctgcaagcagaagctcagcatgccacaggagaagtggaagag
ccgccacgttacctattgaaatttgagcaaatttatctctccaagcctacacattgggaa
agagatggtgccccatcacccatgatgccgaatgaagccaggttgagaaatctgacgtat
tctgctccattatatgtggacataacaaagacggtcattaaagaaggtgaggaccagttg
cagacacagcaccaaaaaaccttcataggaaagattcctatcatgctgcggtccacatac
tgcctgctcaatggcttgaccgatcgtgatctttgtgagctgaacgagtgccctctggac
ccgggtggctacttcataattaacggatcagaaaaggttctgattgctcaagagaagatg
gctacgaacacagtatacgtgttcgctaagaaagattccaaatatgcatatacaggagag
tgtagatcttgcttggagaattcttctcggccaacaagtaccatatgggtgagcatgctg
gccagaggtgggcagggtgcaaagaagagtgccataggtcagcgcattgtggcaactttg
ccatatatcaagcaggaagttcccatcattattgtcttccgtgctctgggctttgtgtct
gacagagacatcctggagcacataatttatgactttgaagatcctgagatgatggagatg
gttaaaccttccttggatgaagcgttcgtcatccaggagcagaacgtggccctgaacttc
attggctcaagaggtgcgaagcctggcgtcaccaaagagaaaagaatcaagtatgccaaa
gaagttctgcagaaagagatgcttccccacgtcggcgtcagtgacttctgtgaaaccaaa
aaggcttattttctagggtacatggttcataggctgctcctggctgccttggggagaagg
gagctggatgacagagatcactacggcaacaaacgcctggacctggcagggccactgctc
gccttcctcttcagagggatgtttaagaacctgctgaaagaggtacgaatatatgcacag
aaattcattgaccgagggaaagattttaacttggagctggccatcaaaacccggataata
tcggacggcttgaagtactcattggcgacggggaactggggggaccagaagaaggctcac
caggccagagctggagtgtctcaggtattgaaccgtctgacttttgcgtctacgctttcc
cacctgcgtcgcttgaactcccccattggtcgagacggaaagctagccaagccccgacaa
ctgcacaacactttatggggaatggtctgtcctgctgagactccggagggtcatgctgtt
gggcttgtgaagaaccttgctctaatggcctacatctcggtggggtctcagccatcccca
attctggaatttctggaagaatggagtatggaaaacctggaagaaatctccccagctgcc
attgcagatgccacaaagatcttcgtgaatggctgctgggttgggatacacaaagaccct
gagcagctcatgaacacattgaggaaactgcggcgccagatggacattatcgtctcagag
gtgtccatgatcagggatatcagggagcgagaaatccgcatctacactgatgccggcagg
atttgccgccctcttctgattgtggaaaagcagaaactgctcttgaagaaaaggcacatt
gaccaactgaaagagcgagaatacaacaactacagctggcaggatctggtggccagtggc
gtagttgaatacatcgacaccctcgaagaggagacagtgatgctggccatgacgccggat
gacttgcaggagaagggcgtcgcgtactgttcgacgtacacacactgtgagattcacccg
tccatgatcctaggagtctgtgcatcgatcattccatttccagatcacaatcagtctcct
aggaatacgtaccagtcagctatgggcaaacaagctatgggagtttacatcaccaacttc
cacgtccgtatggacaccctcgcccatgtcctgtattatcctcagaaacccttggtgacc
actcgctcgatggagtacctgaggttcagggagttgcccgcaggcatcaactccattgtc
gccatcgcttcatatactgggtataatcaggaggactccgttatcatgaatcgttctgca
gttgacagaggctttttcagatcggtgttctatcgttcatacaaagagcaagagtccaag
aaaggttttgaccaggaagaagtgtttgagaagccgacacgggaaacttgtcaggggatg
cggcatgccatctatgacaagctggatgatgacggtttgatcgcacctctggcgtcttcg
cagctgatgtcagaaggagatgatgtcatcatcggaagcattaggaggccagtcccactc
tgcgctgagagaatcgagggacgaagctggagagcccctgtcccttgatacaccaagaga
gactgcagcactttcctacggactagcgagaccggcattgtagatcaggtcatggttact
ttgaaccaggaaggatacaaattttgtaaaattcgggtgcgctctgtgagaatcccacaa
attggagacaaatttgccagtagacacggtcagaaaggtacctgcggtatccagtacagg
caggaggacatgcctttcacctgtgaaggtatcacccctgatatcatcatcaaccctcat
gccatcccttcacgtatgaccattggccacttgattgagtgcctgcaagggaaggtatct
gccaacaaaggggaaataggtgatgccacacctttcaacgatgccgtcaatgtgcagaag
atttccaatttgctctctgactatggttatcacctgagaggaaatgaggttttgtacaat
ggcttcaccggtcgcaaaattacatcgcaaatctttattggccctacttactaccagcgg
ctgaaacacatggtagacgataaaatccattcccgggcaagagggcccattcagatcctt
aacaggcagccaatggaaggtcgatcccgtgatggtggccttcgttttggggagatggag
cgtgactgtcagatcgctcatggagcagcgcagttcttaagggaaagattgtttgaagcc
tcggacccctatcaggttcacgtgtgcaacttgtgtgggctgatggccatagccaacacg
aggacgcatacctatgagtgtcggggctgccgaaataagactcagatttctctggtgagg
atgccatatgcttgcaagctcctcttccaggaactgatgtccatgagtatcgcacctcgg
atgatgagcgtgtag
DBGET
integrated database retrieval system
