Sphaerodactylus townsendi (Townsend's least gecko): 125437283
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Entry
125437283 CDS
T08213
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125437283 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stow03400
]
125437283 (MSH2)
DNA repair and recombination proteins [BR:
stow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125437283 (MSH2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
125437283
NCBI-ProteinID:
XP_048360718
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Position
LG01:complement(43727445..43812413)
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AA seq
903 aa
AA seq
DB search
MAASSDHSPREGSASDNGFVRAVLAMPPKPETTVRFFERGDHYTVHREDAALAAKDLFRT
REVIRLLGTGTQKLESVSLSKMNFESFLRDLLLVRQYRVEVYKNKAGSKSTKENEWHLAH
KGSPGNLSQFEDILFGNHDMSSSVGILGIKLSSADGQKVVGVGLVDSLERKLEVCEFSDN
DQFSNLEALLVQIGPKECVLPVGETAGEMGKLRQVVQRGGILITDRKRSEFSTKDIVQDL
NRLLRSKKKQQISSAALPEMDKQVGISSLSAVIKYLELLNDESNFGQFELGTFDLCQYMT
LDHSAVRALNLFQSSSENAHGTQSLVGLLNKCKTPQGQRLVSQWIKQPLMDKNRIEERLN
LVEALVEDAELRQSLQEDHLHRFPDFNRLTKKFQKKSATLQDCYKTYQAVNHIPNLVKTL
EKNEGNVSFPIFVEIHEYLVKPSFDPNLAELREKMNELEGKMEEVLKVAARELSLDAGKS
IKLECNAQYGHFFRITYREEKVLRSNLKYKVLETQKNGVKFYNSKLRELNEEYAKCRGEY
EEAQGVIVKEILNIASGYKDPIQFLSEVIAQLDAFVSFAHATNAAPVPYVRPKILEMGQG
RITLKGSRHPCIEVQDDVSFIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQ
IGCFVPCEFAEVSVVDSILARVGAGDSQLKGVSTFMAEMLETSSILRTATENSLIIVDEL
GRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALADQVPSVNNLHVTALTTENT
MTMLYRVKKGACDQSFGIHIAELAAFPKHVVDSAKAKALELEEFQHIGKPQEEDEEPAAK
KSYREKQEGEKIIKEFLSKVNAMPQKDLSEEHIRVKLKQLKAEVLAKNNSFVNEIISQAK
VSS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcctcagatcattctccgcgcgaggggtcggcctcagacaatgggtttgtg
cgcgcggtattggctatgccccctaagcccgagaccaccgtgcggttcttcgagcgaggc
gatcattacacggtgcaccgcgaagatgcggcgctggcggccaaggacctttttcgcacg
cgggaagttattcggcttctgggaacaggaacccagaaacttgaaagtgtttcacttagc
aagatgaactttgagtcttttttgagggatctacttctagttcgtcagtatagggtggag
gtgtacaagaacaaagctggaagtaaatctactaaggagaatgagtggcacttggcgcac
aagggctctccaggaaacctttcccaatttgaggatattctctttggtaaccatgacatg
tcgtcttctgttggtatcctgggtattaaactctcctcagctgatggacaaaaagttgtt
ggagttggattagtggattctcttgagcggaaactggaagtgtgtgagttctctgataat
gatcagttttcaaaccttgaagctctgctggttcagatcggacccaaagaatgtgttctc
cctgttggagagactgctggagaaatggggaaactgagacaggttgttcaaaggggagga
attctcatcacagatagaaaaaggagtgaattttccacaaaggatattgtgcaagatctc
aaccgcttgctgaggtcaaaaaagaaacagcagatatccagtgcagctttaccagaaatg
gacaaacaggttggcatctcttcgttgtctgcagtgattaaatatttagaacttttaaat
gatgaatccaattttgggcaatttgaactcggcacctttgacctctgtcagtacatgaca
ctggatcattctgctgttagagctcttaatcttttccagagttcttcagaaaatgcccac
ggcacccagtctctagtaggactgttaaataagtgcaaaacacctcaaggacagaggctt
gtgagccagtggatcaaacagccgctgatggataagaacagaatagaggaaaggctaaat
ttggtggaggcccttgtggaagatgcagaactacgccagtctcttcaagaggaccacctt
catcgtttcccagacttcaatcggctgacaaaaaaatttcaaaaaaaatcagccactctg
caggactgttacaaaacataccaggctgttaatcacattccaaatttggtgaagacgctg
gagaaaaatgaaggtaatgtttctttccccatatttgtggaaatccatgaatatcttgtg
aagccttcctttgatcccaatctggcagaactgagagagaagatgaatgagctagagggg
aaaatggaagaagtgctgaaggtggcagccagggaactaagcttggacgctgggaagagc
atcaaattggaatgcaatgcacaatatgggcattttttccgaattacctacagggaggag
aaagtgttgaggagcaatctgaaatacaaagtcttggaaacccagaagaatggggtgaag
ttctacaacagtaaattgagagaactcaacgaagaatatgcaaaatgcagaggagaatat
gaagaagctcagggtgtaattgttaaagaaatattaaacattgcatcaggatacaaggac
cccatacagtttctgagtgaagtcatagcccagttggatgcatttgtcagttttgctcat
gcaacaaacgcggcgcctgtaccctatgtacgcccaaagattctggaaatgggacaaggg
aggattacgctgaaaggttcaagacacccctgtattgaagttcaagacgatgtttccttc
attccgaatgatgtgacctttgagaagggcaagcagatgttccacatcattactggacca
aacatgggaggaaaatcgacctacattcgccagacgggtgtgatagttcttatggctcaa
attgggtgttttgtgccctgcgaatttgcagaggtgtctgttgttgatagcatactggct
cgtgtaggagctggggacagtcaattgaaaggagtatctaccttcatggcagaaatgctg
gaaacatcttccatcctgaggactgctacagaaaactctttgataatcgtcgatgagttg
ggaagaggaacttctacttacgatggctttggcttggcgtgggctatctcagaatatatc
gccaccaaaattggagccttctgtatgtttgcaactcatttccatgagttgacagctctt
gctgatcaggttccctctgtgaataatttgcatgtcacagcgctgaccactgaaaacacc
atgacaatgttgtaccgtgtgaaaaaaggagcttgtgaccagagttttggaatccacata
gcagagcttgctgcctttccaaaacatgtggtagacagcgcaaaggcaaaagctctggaa
ctagaggagttccagcatattggaaaaccccaggaggaggatgaagaaccagcagccaaa
aaatcctacagagaaaagcaggaaggtgaaaaaataatcaaggagtttctttcaaaagtg
aatgcaatgccacagaaagatctgtcggaagaacacatcagagtcaaactgaagcagctc
aaagctgaagtcttggcaaagaacaacagctttgtgaatgaaatcatttcccaagctaaa
gttagttcatga
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