Sphaerodactylus townsendi (Townsend's least gecko): 125437531
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Entry
125437531 CDS
T08213
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stow04990
]
125437531 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
stow04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
125437531 (SNED1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
Pur_ac_phosph_N
cEGF
Ig_DSCAM-DSCAML_C
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
125437531
NCBI-ProteinID:
XP_048361111
LinkDB
All DBs
Position
LG08:complement(73069021..73162852)
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AA seq
1446 aa
AA seq
DB search
MRGLSGWLVLLALGGWLQLRAEGAVPLADFYPFGPAHGDATTPLQDDGGSGLRPVAIKFP
FFGAAHTALYVNNNGIISFLREVSQFTPVAFPISNDRRVVAAFWADVDNRRAGKVYYRET
RDQTVLEKATKDIWQYFPEFPEFSAQWVFIATWNQVTFFGGNSLSPVNTFQIVLITDGIL
SFTVFNYESITWTTGMHASSGGNSAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIVDVEM
TTNVGIPGRWVFRIDDAQVQVGGCNNTTSVCLTLRPCQNAGKCIEDCITGNPSYSCSCLA
GFTGKQCHIDVDECASNPCRNKASCIDGINNFRCLCPPGFKGALCEIEESPCEAKECLNG
GECQAANRTAVCLCQPGYTGEDCEAELNECESNPCLNGGQCMDLVDNYTCVCVAPFTGQR
CETDPSACEGKNCRNRQTCNYIRPGRYICTCSPGYYGNNCQFGGPRMPSACFSNPCQNEG
TCLETSQGYVCECLEGFSGPDCRDKVSEDCECRNGGRCLDGNSTICQCPLGYFGLLCELE
VTATPCSMNTQCPDGGYCMEYGGSYLCVCHTDYGTNHTVPPSPCDSEPCLNGGSCDAQDD
SYTCECTRGFIGRHCEKARPKLCSSGPCRNGGTCKESDGEYHCTCPYRFTGKHCEIGKPD
PCASGPCHNGGTCFHYIGKYKCDCLPGYSGRHCEIAPSPCLLNPCEHGATCKDLGNNYIC
SCPAGYIGRHCQSEVDCGIPNEIKHAQVTFNSTKMGSLAEYQCNLGYMLSLHNNPRVCRA
QGTWSDPPQCNEIDECRSQPCLNGGSCKDRIAAFLCLCKIGYTGHHCELEIDECQSEPCK
NSGTCKDRPGSFICHCPEGFIGTQCETEVDACESNPCRNGGECENYSGSYLCVCPEGFFG
YHCEIASDPCFSNPCGSRGYCLPSNGSHNCTCKVGYSGKNCEKELLPPTSLKVERVEETG
LLISWRPPKDQAAKHMIDGYAVTYVSFDGSYRRTDYVDRSRAAHQLRALASGKVYNISVF
SVKRNLNNKNDISKPVMLVTRTRPRMVEGFEIANVTATTITVQWALHRLKHSTVSRVRLS
IRQPEDAGDHAAELNNTMTKYTFWDLQPGQKYVIHMWTLSGLSPEDHPTESFTTAPLYAW
TRPLPPRNLTASRITATSVHMTWEKPLVGSGEGYIINETTSQIEKSRYVPNGKLTSYTMR
DLKPGQRYRLSVAAVQKTDQGQVTSEPAHLYITTLQKDKSPERRWSQTGHPRVLRNRVPP
PYLPDLRLLADHNTPEEPSQAPSFTELVDGRGRITTKFSSSPSRHVTVRTQPEVPKKVEE
NVEESTNQGSLALQLSEPESSKKESEKQNCSVNSCKNGGTCVTDSESYHCDCNPGYKGRH
CELACKKVPHSCTRLYSETKSFPVWEGGVCHYLYRRVYKVHQDVCYKESCESTPNKAVSR
KQSNRH
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcctgtccggctggctggtgctgctggcgctcgggggttggcttcagctgcgg
gcggagggcgccgtgcccctggctgacttctacccgttcgggccggcgcatggcgacgcg
accaccccgctgcaggacgacggcggatcggggctgcgacccgtcgccatcaagttcccc
ttctttggcgcagcgcacacggcgctctacgtaaacaacaatgggatcatctcctttctg
agggaggtatcccagtttacaccagtggctttccccatctcaaatgatcgacgtgtggtt
gcagctttctgggctgatgtagataatcggcgtgcaggaaaagtatattaccgggaaacg
agggaccaaactgtcttggagaaagccactaaagatatctggcaatatttcccagagttc
ccagagttctctgcccaatgggtatttatagccacttggaaccaggtcaccttttttgga
ggaaattcactgtctccggtaaatactttccaaatagtcctcatcaccgatgggatactg
tccttcactgtcttcaactatgagtcaatcacctggaccactggcatgcatgccagcagc
gggggaaattcagcaggcctgggaggcattgcggcccaggcaggtttcaatgctggtgat
ggaaaacggtattttaacatccccggatcccgcactgatgacattgtcgacgtggagatg
acaacaaatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaa
gtggggggctgcaacaacacaacttctgtgtgtctgacactccgcccttgtcagaatgct
ggaaagtgtattgaggactgcatcacagggaacccctcctactcctgctcttgtctggct
ggattcactggaaagcagtgccatattgatgtggatgagtgtgcttctaacccatgtcgg
aacaaagcctcctgtatcgatggcatcaacaatttcaggtgtttgtgtcctccaggattc
aaaggagccttgtgtgaaattgaggaatctccatgtgaagccaaagaatgcctgaatggt
ggggaatgccaagcagcaaacagaacagctgtgtgcctgtgccagccgggctacactgga
gaagattgtgaggcagaactaaatgaatgcgagtccaacccatgtctgaatggtgggcaa
tgtatggacctggtggacaattacacctgtgtgtgtgtggcgccattcacaggacaacgc
tgtgaaacagatccttcagcctgtgagggcaagaactgcaggaaccggcagacatgcaac
tacatccgcccagggcgctacatctgcacatgctctccaggctattatgggaacaactgt
cagtttggtgggcccagaatgcccagtgcatgtttttccaatccatgccagaatgagggc
acttgtcttgaaaccagtcaaggctacgtgtgtgaatgtcttgagggattttcaggtcct
gattgcagggacaaggtttcggaggactgtgagtgtcgaaatggggggaggtgcctagat
ggaaacagcactatatgccagtgcccactaggatattttggccttctctgtgaactggaa
gtgactgctaccccttgcagtatgaacacccagtgcccagatggaggttattgcatggag
tatggaggcagctacctctgtgtgtgccatacagattatggcactaaccacactgtgcca
ccatctccctgtgactcagagccttgcctgaatggtggatcatgcgacgctcaggatgac
tcttatacctgtgaatgtacccgagggttcatcggcagacactgtgaaaaagcaaggcca
aagctgtgcagttctgggccctgccgtaatggagggacgtgtaaggaatcggatggtgaa
taccactgcacctgtccctaccgcttcacaggaaagcactgtgagataggtaaacctgat
ccctgtgcttctggcccttgtcacaatgggggcacctgcttccactatatcggcaagtat
aaatgtgactgccttccaggatattcaggacgacactgtgaaatagccccttctccttgc
ctcttgaatccatgtgaacacggagccacttgtaaggatcttggcaacaactatatctgc
tcatgcccagctggttacataggaagacactgtcagtcagaagtagactgtggtattcct
aatgagataaagcatgctcaggtgacatttaactctactaagatgggatctctggcagag
taccagtgcaatcttggctacatgctgagtctccacaacaaccccagagtttgcagagca
caaggcacttggagtgaccctccgcagtgtaatgaaattgatgaatgcagatctcagcca
tgcctgaatggaggttcatgtaaagatcggattgctgctttcctgtgtttatgcaaaatt
ggctacaccggacaccactgtgagttggagattgatgagtgtcagtcagaaccatgcaaa
aacagtggaacctgtaaagatcggccaggatcatttatctgtcattgtcctgaaggcttc
attggaacccagtgtgaaacggaagtggatgcctgtgaatcaaacccttgtcggaatgga
ggagaatgtgaaaattacagtggttcctatctgtgtgtctgtccagagggcttctttggc
taccattgtgaaatagctagtgacccctgtttctccaacccgtgtgggagcagaggctac
tgtcttcccagcaatggatctcataactgcacctgcaaagtgggctacagtggcaagaac
tgtgagaaagagctgctgcccccaacatcactgaaggtggaaagggtggaggagactggg
ctgttaatctcttggcgccctccgaaggaccaagctgccaagcatatgattgatggctac
gccgtgacgtacgtatccttcgacggctcttaccgcaggactgattatgtggaccgaagt
cgtgctgcccaccaattgcgggcactagcctccggcaaagtctacaatatttctgtcttt
tcagtcaaacgcaacttgaacaacaagaatgatatcagcaagcctgtcatgctcgtcact
cgtactaggcctcgcatggtagaaggatttgagattgccaatgtgactgccacaaccatt
actgtgcaatgggctctccacaggcttaaacactccacagtgagcagggtgcgtttgtcc
atacgtcagccagaggacgcaggggatcatgctgcagaattaaataataccatgactaaa
tacacattctgggaccttcagccagggcagaagtatgttatccatatgtggaccttgagt
ggcctcagtcctgaagatcatcccactgagagttttactacagcacccctctatgcatgg
actcggcctcttcctcctaggaacctgactgcatctagaatcactgccacctctgtccat
atgacctgggaaaaacctctggttggctctggagaaggatatatcatcaatgaaaccacc
agtcagattgagaagagtcggtatgtgcccaatggaaagctgacttcctataccatgcgt
gacctgaaaccagggcaaagatatcgtttatctgtggcagctgttcagaaaacagatcaa
ggccaagtgactagtgaacctgcccatctctatattacaaccttacagaaggataaaagt
ccagaaaggcgctggagccagacaggacatcctcgagtgcttagaaatcgagtccctcca
ccatacttgccagatctgcgccttcttgcggatcacaacaccccagaggaaccttcacaa
gcacctagttttacagaactggtggatggcaggggaaggatcaccactaaattcagcagc
tcaccaagcagacatgtcactgtgagaacacaacctgaggttccaaagaaagtggaagaa
aacgtggaagaatctaccaatcaaggcagcctggcactgcagctatcggagcccgagagc
agcaaaaaagaaagtgagaagcagaactgttccgtaaactcctgcaagaatgggggaacc
tgtgtcactgactcagagtcctaccactgtgactgtaatcctggatacaaaggcagacac
tgtgaactagcctgcaagaaggtgcctcattcttgtactcggctctattcagaaaccaag
tcctttccggtctgggagggaggtgtctgtcattacttatacaggcgggtctacaaagtc
caccaggatgtctgctacaaggagagttgtgagagcactccaaacaaagcggtcagcagg
aaacaaagtaacagacactaa
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