Sphaerodactylus townsendi (Townsend's least gecko): 125437647
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Entry
125437647 CDS
T08213
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125437647 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_NLRC4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
125437647
NCBI-ProteinID:
XP_048361398
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Position
LG08:complement(56854563..56933110)
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVSSAKEREKEAKATGGFGRESKEREPKTKGKEAKDGKKDSSSV
QPGVAFSVDNTIKRPNPAQGARKKSSNAEVIKELNKCREENSVRLDLAKRSIHLLPSSVK
ELTQLTELYLYGNKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMLDLRHNK
LREIPPVVYRLISLTTLYLRFNRITAVEKDIKNLSILTMLSIRENKIKHLPAEVGELCNL
ITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSLGNLSSLKSLGLRYNRLSAIP
RSLAQCSKLDELNLENNNISTLPESLLSSLLNLTSLTLARNCFQSYPVGGPSQFSTIYAL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPED
VSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN
NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC
SKLSIMSIENCPLNTLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatcttggaaaagaaaaagattgtaaggagaaagatcccaaagtgtcttca
gcaaaggagagagagaaagaagccaaggccactggtggatttgggagagaaagcaaagag
agagagcctaaaaccaaagggaaagaagccaaagatgggaagaaggactccagcagtgta
cagccaggtgtggctttttcagtggacaatacaataaaacgacctaatccagcacaaggc
gctcgcaaaaaatccagcaatgccgaagtgatcaaagaactaaacaaatgccgggaagaa
aattcagtacgcttggacttggctaagcggtctatacaccttctcccatcatctgtaaaa
gagttaacacaattaacagaactttatttatatggtaacaaactacagtcactaccagcc
gaggtgggctgccttgtcaacctggtgactctggccctgagtgaaaactctcttaccagc
ctgcctgactctcttgataacttgaagcaactccgtatgcttgatctgaggcataacaaa
cttagagaaattcctccagtggtgtataggctaatttccctaaccacactttatctacgc
tttaatcgtatcacagctgtggaaaaggatatcaagaacttgtcaatactcaccatgctc
agtatacgggagaacaaaatcaagcacctgcctgcagaagttggtgagttgtgtaacctc
ataacgctggatgtagcacacaatcagcttgaacaccttccaaaggagattggaaattgc
acacagatcaccaaacttgacctacagcacaatgaactcttggaccttccagacagttta
ggaaatctgtccagtctgaaaagtcttggtctgaggtataaccggctttcagcaataccc
aggtctctagcacagtgcagcaaacttgatgagctgaatttggagaacaacaatatttct
actttaccagagagtctcttatccagtcttctcaacctgacaagtctgactctggcaaga
aactgtttccagtcatatccagtcggtggtccctcacaattttctaccatctatgctctc
aacatggagcacaaccgcatcaataaaatcccatttggaattttctctagagcaaaagtg
ttaagcaagctgaacatgaaggacaatcagctgacttctcttcctctggactttggaaca
tggactagcatggtagaacttaatttagctacaaaccaactgaacaagattcccgaggat
gtgtctggactggtttctttagaggttcttattttatcgaacaatcttttaaggaatctt
ccccatggaattgggaacctgagaaaactaagagaattggatttggaagaaaacaagctg
gaatccttgccaaatgaaatagcataccttagggatctccagagactgatcctaacaaat
aaccagttgagcacccttcccagaggaattggacacctcatcaacctgacacatcttgga
ttgggagagaactttctgacacaacttcctgaggaaattggtacactggagaatctggaa
gaactgtatctgaatgacaaccctcacctgaacagccttccttttgaactggccctttgc
agtaaactgtcgataatgagcattgagaattgcccactcaatacccttccagctcagatt
gttgcaggggggccttcctttattatccagttcctgaagatgcagggaccttatcgtgcc
atggtctga
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